RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 HOXA9P31269 272 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 CASP14P31944 242 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 STIP1P31948 543 aaKnown RBP7.28□□□□□ -1.24
CSDE1-204ENST00000369530 TXKP42681 527 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 TMEM62Q0P6H9 643 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 HERC4Q5GLZ8 1057 aaPredicted RBP7.28□□□□□ -1.24
CSDE1-204ENST00000369530 FOXB2Q5VYV0 432 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 SLC8B1Q6J4K2 584 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 NCCRP1Q6ZVX7 275 aaPredicted RBP7.28□□□□□ -1.24
CSDE1-204ENST00000369530 BHLHA9Q7RTU4 235 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 LMO3Q8TAP4 145 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 SEPT8Q92599 483 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 ATP6V1G3Q96LB4 118 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 NDNQ99608 321 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 SYT15Q9BQS2 421 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 ZHX3Q9H4I2 956 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 PREBQ9HCU5 417 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 FANCLQ9NW38 375 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 MAFFQ9ULX9 164 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 RPL26L1Q9UNX3 145 aaKnown RBP7.28□□□□□ -1.24
CSDE1-204ENST00000369530 ZNF148Q9UQR1 794 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 DAAM1Q9Y4D1 1078 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 ABL1P00519 1130 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 PIM1P11309 404 aaPredicted RBP7.28□□□□□ -1.24
CSDE1-204ENST00000369530 MRPS25P82663 173 aaKnown RBP7.28□□□□□ -1.24
CSDE1-204ENST00000369530 ADRM1Q16186 407 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 EEF1DP3Q658K8 133 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 ZNF280DQ6N043 979 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 CACNA2D4Q7Z3S7 1137 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 PIGWQ7Z7B1 504 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 MRPL43Q8N983 215 aaKnown RBP7.28□□□□□ -1.24
CSDE1-204ENST00000369530 ATP11CQ8NB49 1132 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 P2RY11Q96G91 374 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 IGSF21Q96ID5 467 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 NACC1Q96RE7 527 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 CDCA3Q99618 268 aaPredicted RBP7.28□□□□□ -1.24
CSDE1-204ENST00000369530 REEP2Q9BRK0 252 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 CENPHQ9H3R5 247 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 CEP72Q9P209 647 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 SUCLA2Q9P2R7 463 aaPredicted RBP7.28□□□□□ -1.24
CSDE1-204ENST00000369530 PRKAG3Q9UGI9 489 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 DACH1Q9UI36 760 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 E9PMD0 336 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 USO1O60763 962 aaKnown RBP7.28□□□□□ -1.24
CSDE1-204ENST00000369530 DRD4P21917 467 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 KIZQ2M2Z5 673 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 ZNF569Q5MCW4 686 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 KANK3Q6NY19 840 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 ASRGL1Q7L266 308 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 MIER3Q7Z3K6 550 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 RSPH3Q86UC2 560 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 SMYD4Q8IYR2 804 aaPredicted RBP7.28□□□□□ -1.24
CSDE1-204ENST00000369530 SPATA18Q8TC71 538 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 CPLX3Q8WVH0 158 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 MFSD14AQ96MC6 490 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 XYLT2Q9H1B5 865 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 CDT1Q9H211 546 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 IKZF4Q9H2S9 585 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 EPS15L1Q9UBC2 864 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 TTLL3Q9Y4R7 772 aa7.28□□□□□ -1.24
CSDE1-204ENST00000369530 FRYQ5TBA9 3013 aa7.27□□□□□ -1.25
CSDE1-204ENST00000369530 ZNF233A6NK53 670 aa7.27□□□□□ -1.25
CSDE1-204ENST00000369530 RFXAPO00287 272 aa7.27□□□□□ -1.25
CSDE1-204ENST00000369530 DIAPH2O60879 1101 aa7.27□□□□□ -1.25
CSDE1-204ENST00000369530 AMHP03971 560 aa7.27□□□□□ -1.25
CSDE1-204ENST00000369530 IDEP14735 1019 aa7.27□□□□□ -1.25
CSDE1-204ENST00000369530 SKIV2L2P42285 1042 aaKnown RBP7.27□□□□□ -1.25
CSDE1-204ENST00000369530 TECP42680 631 aa7.27□□□□□ -1.25
CSDE1-204ENST00000369530 SLC11A1P49279 550 aa7.27□□□□□ -1.25
CSDE1-204ENST00000369530 TUBP50607 506 aa7.27□□□□□ -1.25
CSDE1-204ENST00000369530 PLOD1Q02809 727 aaPredicted RBP7.27□□□□□ -1.25
CSDE1-204ENST00000369530 GSTM4Q03013 218 aa7.27□□□□□ -1.25
CSDE1-204ENST00000369530 KARSQ15046 597 aaKnown RBP7.27□□□□□ -1.25
CSDE1-204ENST00000369530 ZBTB41Q5SVQ8 909 aa7.27□□□□□ -1.25
CSDE1-204ENST00000369530 RRAGBQ5VZM2 374 aa7.27□□□□□ -1.25
CSDE1-204ENST00000369530 IQCEQ6IPM2 695 aa7.27□□□□□ -1.25
CSDE1-204ENST00000369530 MAMSTRQ6ZN01 415 aa7.27□□□□□ -1.25
CSDE1-204ENST00000369530 KIAA1958Q8N8K9 716 aa7.27□□□□□ -1.25
CSDE1-204ENST00000369530 TSEN2Q8NCE0 465 aaKnown RBP7.27□□□□□ -1.25
CSDE1-204ENST00000369530 ANKK1Q8NFD2 765 aa7.27□□□□□ -1.25
CSDE1-204ENST00000369530 ARHGEF3Q9NR81 526 aa7.27□□□□□ -1.25
CSDE1-204ENST00000369530 TBC1D7Q9P0N9 293 aa7.27□□□□□ -1.25
CSDE1-204ENST00000369530 SIX4Q9UIU6 781 aa7.27□□□□□ -1.25
CSDE1-204ENST00000369530 AKR1B15C9JRZ8 316 aaPredicted RBP7.27□□□□□ -1.25
CSDE1-204ENST00000369530 MBTPS2O43462 519 aa7.27□□□□□ -1.25
CSDE1-204ENST00000369530 ZNF189O75820 626 aaPredicted RBP7.27□□□□□ -1.25
CSDE1-204ENST00000369530 OAZ2O95190 189 aa7.27□□□□□ -1.25
CSDE1-204ENST00000369530 CBX3Q13185 183 aa7.27□□□□□ -1.25
CSDE1-204ENST00000369530 SPIDRQ14159 915 aa7.27□□□□□ -1.25
CSDE1-204ENST00000369530 TRMT1LQ7Z2T5 733 aaKnown RBP7.27□□□□□ -1.25
CSDE1-204ENST00000369530 BNIPLQ7Z465 357 aa7.27□□□□□ -1.25
CSDE1-204ENST00000369530 FAM178BQ8IXR5 827 aa7.27□□□□□ -1.25
CSDE1-204ENST00000369530 CACNA2D3Q8IZS8 1091 aa7.27□□□□□ -1.25
CSDE1-204ENST00000369530 ZNF516Q92618 1163 aa7.27□□□□□ -1.25
CSDE1-204ENST00000369530 ZIM3Q96PE6 472 aa7.27□□□□□ -1.25
CSDE1-204ENST00000369530 CGREF1Q99674 301 aa7.27□□□□□ -1.25
CSDE1-204ENST00000369530 VCX3BQ9H321 246 aa7.27□□□□□ -1.25
CSDE1-204ENST00000369530 TMBIM4Q9HC24 238 aa7.27□□□□□ -1.25
CSDE1-204ENST00000369530 VCX3AQ9NNX9 186 aa7.27□□□□□ -1.25
CSDE1-204ENST00000369530 PANK4Q9NVE7 773 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms