RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 BCO2Q9BYV7 579 aa20.2■□□□□ 0.82
CKS1B-203ENST00000368439 FOXQ1Q9C009 403 aa20.2■□□□□ 0.82
CKS1B-203ENST00000368439 TMEM8AQ9HCN3 771 aa20.2■□□□□ 0.82
CKS1B-203ENST00000368439 TRPV5Q9NQA5 729 aa20.2■□□□□ 0.82
CKS1B-203ENST00000368439 HEBP1Q9NRV9 189 aa20.2■□□□□ 0.82
CKS1B-203ENST00000368439 OBP2AQ9NY56 170 aa20.2■□□□□ 0.82
CKS1B-203ENST00000368439 KANSL1LA0AUZ9 987 aa20.19■□□□□ 0.82
CKS1B-203ENST00000368439 SOBPA7XYQ1 873 aa20.19■□□□□ 0.82
CKS1B-203ENST00000368439 STK25O00506 426 aa20.19■□□□□ 0.82
CKS1B-203ENST00000368439 GTF2H1P32780 548 aa20.19■□□□□ 0.82
CKS1B-203ENST00000368439 PIK3CAP42336 1068 aa20.19■□□□□ 0.82
CKS1B-203ENST00000368439 PTPN5P54829 565 aa20.19■□□□□ 0.82
CKS1B-203ENST00000368439 FKBP3Q00688 224 aaKnown RBP20.19■□□□□ 0.82
CKS1B-203ENST00000368439 LRRC63Q05C16 580 aa20.19■□□□□ 0.82
CKS1B-203ENST00000368439 MORC3Q14149 939 aa20.19■□□□□ 0.82
CKS1B-203ENST00000368439 PAQR9Q6ZVX9 377 aa20.19■□□□□ 0.82
CKS1B-203ENST00000368439 CCDC105Q8IYK2 499 aa20.19■□□□□ 0.82
CKS1B-203ENST00000368439 CMTM8Q8IZV2 173 aa20.19■□□□□ 0.82
CKS1B-203ENST00000368439 PJA1Q8NG27 643 aa20.19■□□□□ 0.82
CKS1B-203ENST00000368439 IRF7Q92985 503 aa20.19■□□□□ 0.82
CKS1B-203ENST00000368439 SHDQ96IW2 340 aa20.19■□□□□ 0.82
CKS1B-203ENST00000368439 C8orf48Q96LL4 319 aa20.19■□□□□ 0.82
CKS1B-203ENST00000368439 ZNF518BQ9C0D4 1074 aa20.19■□□□□ 0.82
CKS1B-203ENST00000368439 SMG9Q9H0W8 520 aaKnown RBP20.19■□□□□ 0.82
CKS1B-203ENST00000368439 BRD9Q9H8M2 597 aa20.19■□□□□ 0.82
CKS1B-203ENST00000368439 UXTQ9UBK9 157 aaPredicted RBP20.19■□□□□ 0.82
CKS1B-203ENST00000368439 HMGXB4Q9UGU5 601 aa20.19■□□□□ 0.82
CKS1B-203ENST00000368439 F5P12259 2224 aa20.19■□□□□ 0.82
CKS1B-203ENST00000368439 PPP1R3GB7ZBB8 358 aa20.18■□□□□ 0.82
CKS1B-203ENST00000368439 CLDN5O00501 218 aa20.18■□□□□ 0.82
CKS1B-203ENST00000368439 SLC16A3O15427 465 aaKnown RBP20.18■□□□□ 0.82
CKS1B-203ENST00000368439 EPB41P11171 864 aaKnown RBP20.18■□□□□ 0.82
CKS1B-203ENST00000368439 GLULP15104 373 aa20.18■□□□□ 0.82
CKS1B-203ENST00000368439 CCNE1P24864 410 aa20.18■□□□□ 0.82
CKS1B-203ENST00000368439 DDX6P26196 483 aaKnown RBP eCLIP20.18■□□□□ 0.826e-7■■□□□ 14.3
CKS1B-203ENST00000368439 GRIK1P39086 918 aa20.18■□□□□ 0.82
CKS1B-203ENST00000368439 USP46P62068 366 aa20.18■□□□□ 0.82
CKS1B-203ENST00000368439 UBE2HP62256 183 aa20.18■□□□□ 0.82
CKS1B-203ENST00000368439 KRT39Q6A163 491 aa20.18■□□□□ 0.82
CKS1B-203ENST00000368439 TXNDC8Q6A555 127 aa20.18■□□□□ 0.82
CKS1B-203ENST00000368439 MON1AQ86VX9 555 aa20.18■□□□□ 0.82
CKS1B-203ENST00000368439 MAB21L3Q8N8X9 362 aa20.18■□□□□ 0.82
CKS1B-203ENST00000368439 SEMA4DQ92854 862 aa20.18■□□□□ 0.82
CKS1B-203ENST00000368439 DHTKD1Q96HY7 919 aaPredicted RBP20.18■□□□□ 0.82
CKS1B-203ENST00000368439 TSG101Q99816 390 aa20.18■□□□□ 0.82
CKS1B-203ENST00000368439 MMRN2Q9H8L6 949 aa20.18■□□□□ 0.82
CKS1B-203ENST00000368439 ZMYM5Q9UJ78 669 aa20.18■□□□□ 0.82
CKS1B-203ENST00000368439 SIT1Q9Y3P8 196 aa20.18■□□□□ 0.82
CKS1B-203ENST00000368439 MTF2Q9Y483 593 aaPredicted RBP20.18■□□□□ 0.82
CKS1B-203ENST00000368439 HELZP42694 1942 aaKnown RBP20.17■□□□□ 0.82
CKS1B-203ENST00000368439 F8VP50 259 aa20.17■□□□□ 0.82
CKS1B-203ENST00000368439 ZNF263O14978 683 aa20.17■□□□□ 0.82
CKS1B-203ENST00000368439 TRIM66O15016 1216 aa20.17■□□□□ 0.82
CKS1B-203ENST00000368439 CHADO15335 359 aa20.17■□□□□ 0.82
CKS1B-203ENST00000368439 P4HA1P13674 534 aa20.17■□□□□ 0.82
CKS1B-203ENST00000368439 CD72P21854 359 aa20.17■□□□□ 0.82
CKS1B-203ENST00000368439 NDST1P52848 882 aa20.17■□□□□ 0.82
CKS1B-203ENST00000368439 NOP14P78316 857 aaKnown RBP20.17■□□□□ 0.82
CKS1B-203ENST00000368439 TPRG1Q6ZUI0 275 aa20.17■□□□□ 0.82
CKS1B-203ENST00000368439 UNC93AQ86WB7 457 aa20.17■□□□□ 0.82
CKS1B-203ENST00000368439 ZNF687Q8N1G0 1237 aa20.17■□□□□ 0.82
CKS1B-203ENST00000368439 CRYBG2Q8N1P7 616 aa20.17■□□□□ 0.82
CKS1B-203ENST00000368439 DTWD2Q8NBA8 298 aa20.17■□□□□ 0.82
CKS1B-203ENST00000368439 DUSP9Q99956 384 aaKnown RBP20.17■□□□□ 0.82
CKS1B-203ENST00000368439 TTLL2Q9BWV7 592 aa20.17■□□□□ 0.82
CKS1B-203ENST00000368439 ELOVL4Q9GZR5 314 aa20.17■□□□□ 0.82
CKS1B-203ENST00000368439 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.17■□□□□ 0.82
CKS1B-203ENST00000368439 CCL26Q9Y258 94 aa20.17■□□□□ 0.82
CKS1B-203ENST00000368439 PATJQ8NI35 1801 aa20.17■□□□□ 0.82
CKS1B-203ENST00000368439 MYH10P35580 1976 aa20.17■□□□□ 0.82
CKS1B-203ENST00000368439 PSMA7O14818 248 aa20.16■□□□□ 0.82
CKS1B-203ENST00000368439 DCNP07585 359 aaKnown RBP20.16■□□□□ 0.82
CKS1B-203ENST00000368439 INCA1Q0VD86 236 aa20.16■□□□□ 0.82
CKS1B-203ENST00000368439 FZD5Q13467 585 aa20.16■□□□□ 0.82
CKS1B-203ENST00000368439 DENND5BQ6ZUT9 1274 aa20.16■□□□□ 0.82
CKS1B-203ENST00000368439 ACOT1Q86TX2 421 aa20.16■□□□□ 0.82
CKS1B-203ENST00000368439 RIN3Q8TB24 985 aa20.16■□□□□ 0.82
CKS1B-203ENST00000368439 MRPS31Q92665 395 aaKnown RBP20.16■□□□□ 0.82
CKS1B-203ENST00000368439 USP13Q92995 863 aaPredicted RBP20.16■□□□□ 0.82
CKS1B-203ENST00000368439 TNIP3Q96KP6 325 aa20.16■□□□□ 0.82
CKS1B-203ENST00000368439 TWNKQ96RR1 684 aa20.16■□□□□ 0.82
CKS1B-203ENST00000368439 OSBPL6Q9BZF3 934 aa20.16■□□□□ 0.82
CKS1B-203ENST00000368439 LTB4R2Q9NPC1 389 aa20.16■□□□□ 0.82
CKS1B-203ENST00000368439 H0Y858 1186 aa20.15■□□□□ 0.82
CKS1B-203ENST00000368439 DPYSL4O14531 572 aa20.15■□□□□ 0.82
CKS1B-203ENST00000368439 CLSTN1O94985 981 aa20.15■□□□□ 0.82
CKS1B-203ENST00000368439 RFX1P22670 979 aa20.15■□□□□ 0.82
CKS1B-203ENST00000368439 ANXA13P27216 316 aa20.15■□□□□ 0.82
CKS1B-203ENST00000368439 ANP32AP39687 249 aaKnown RBP20.15■□□□□ 0.82
CKS1B-203ENST00000368439 PPP1R2P41236 205 aa20.15■□□□□ 0.82
CKS1B-203ENST00000368439 MXI1P50539 228 aa20.15■□□□□ 0.82
CKS1B-203ENST00000368439 ORC1Q13415 861 aa20.15■□□□□ 0.82
CKS1B-203ENST00000368439 CBWD6Q4V339 395 aa20.15■□□□□ 0.82
CKS1B-203ENST00000368439 CBWD3Q5JTY5 395 aa20.15■□□□□ 0.82
CKS1B-203ENST00000368439 CBWD5Q5RIA9 395 aa20.15■□□□□ 0.82
CKS1B-203ENST00000368439 TTI2Q6NXR4 508 aa20.15■□□□□ 0.82
CKS1B-203ENST00000368439 FOXR2Q6PJQ5 311 aa20.15■□□□□ 0.82
CKS1B-203ENST00000368439 FAM35AQ86V20 835 aa20.15■□□□□ 0.82
CKS1B-203ENST00000368439 FUKQ8N0W3 1084 aa20.15■□□□□ 0.82
CKS1B-203ENST00000368439 CELF5Q8N6W0 485 aaKnown RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms