RNA–Protein interactions for RNA: ENST00000368299.7

LMNA-205, Transcript of lamin A/C, humanhuman

TSL 1 (best) BASIC

Gene LMNA, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-205ENST00000368299 XKR4Q5GH76 650 aa18.37■□□□□ 0.53
LMNA-205ENST00000368299 PGM2Q96G03 612 aa18.37■□□□□ 0.53
LMNA-205ENST00000368299 ZNF560Q96MR9 790 aa18.37■□□□□ 0.53
LMNA-205ENST00000368299 MRPL45Q9BRJ2 306 aaKnown RBP18.37■□□□□ 0.53
LMNA-205ENST00000368299 FOXP3Q9BZS1 431 aa18.37■□□□□ 0.53
LMNA-205ENST00000368299 DUSP11O75319 330 aaKnown RBP18.37■□□□□ 0.53
LMNA-205ENST00000368299 KLRC2P26717 231 aa18.37■□□□□ 0.53
LMNA-205ENST00000368299 ATP1A2P50993 1020 aa18.37■□□□□ 0.53
LMNA-205ENST00000368299 ADCY2Q08462 1091 aa18.37■□□□□ 0.53
LMNA-205ENST00000368299 TRIP13Q15645 432 aaPredicted RBP18.37■□□□□ 0.53
LMNA-205ENST00000368299 GOLGA7BQ2TAP0 167 aa18.37■□□□□ 0.53
LMNA-205ENST00000368299 FBXO47Q5MNV8 452 aa18.37■□□□□ 0.53
LMNA-205ENST00000368299 ARFGAP1Q8N6T3 406 aa18.37■□□□□ 0.53
LMNA-205ENST00000368299 EMC1Q8N766 993 aa18.37■□□□□ 0.53
LMNA-205ENST00000368299 TTC13Q8NBP0 860 aa18.37■□□□□ 0.53
LMNA-205ENST00000368299 PPP1R13LQ8WUF5 828 aa18.37■□□□□ 0.53
LMNA-205ENST00000368299 NKD2Q969F2 451 aaPredicted RBP18.37■□□□□ 0.53
LMNA-205ENST00000368299 C18orf25Q96B23 403 aaPredicted RBP18.37■□□□□ 0.53
LMNA-205ENST00000368299 CXCL16Q9H2A7 254 aa18.37■□□□□ 0.53
LMNA-205ENST00000368299 BCCIPQ9P287 314 aaKnown RBP eCLIP18.37■□□□□ 0.53
LMNA-205ENST00000368299 HESX1Q9UBX0 185 aa18.37■□□□□ 0.53
LMNA-205ENST00000368299 DNPEPQ9ULA0 475 aa18.37■□□□□ 0.53
LMNA-205ENST00000368299 ZNF148Q9UQR1 794 aa18.37■□□□□ 0.53
LMNA-205ENST00000368299 SMIM28A0A1B0GU29 152 aa18.36■□□□□ 0.53
LMNA-205ENST00000368299 C3orf70A6NLC5 250 aaPredicted RBP18.36■□□□□ 0.53
LMNA-205ENST00000368299 PIRO00625 290 aa18.36■□□□□ 0.53
LMNA-205ENST00000368299 PPEF2O14830 753 aa18.36■□□□□ 0.53
LMNA-205ENST00000368299 CYP3A5P20815 502 aa18.36■□□□□ 0.53
LMNA-205ENST00000368299 TAZQ16635 292 aa18.36■□□□□ 0.53
LMNA-205ENST00000368299 GLRA4Q5JXX5 417 aa18.36■□□□□ 0.53
LMNA-205ENST00000368299 C6orf118Q5T5N4 469 aa18.36■□□□□ 0.53
LMNA-205ENST00000368299 CNPY3Q9BT09 278 aa18.36■□□□□ 0.53
LMNA-205ENST00000368299 ZWILCHQ9H900 591 aa18.36■□□□□ 0.53
LMNA-205ENST00000368299 ANKRD65E5RJM6 399 aa18.35■□□□□ 0.53
LMNA-205ENST00000368299 ITGAVP06756 1048 aa18.35■□□□□ 0.53
LMNA-205ENST00000368299 GPD1P21695 349 aa18.35■□□□□ 0.53
LMNA-205ENST00000368299 AKAP5P24588 427 aa18.35■□□□□ 0.53
LMNA-205ENST00000368299 VCPP55072 806 aaKnown RBP18.35■□□□□ 0.53
LMNA-205ENST00000368299 ZNF200P98182 395 aaPredicted RBP18.35■□□□□ 0.53
LMNA-205ENST00000368299 SKIDA1Q1XH10 827 aa18.35■□□□□ 0.53
LMNA-205ENST00000368299 PKDCCQ504Y2 493 aa18.35■□□□□ 0.53
LMNA-205ENST00000368299 PPP1R26Q5T8A7 1209 aaPredicted RBP18.35■□□□□ 0.53
LMNA-205ENST00000368299 CCDC25Q86WR0 208 aa18.35■□□□□ 0.53
LMNA-205ENST00000368299 ALLCQ8N6M5 410 aa18.35■□□□□ 0.53
LMNA-205ENST00000368299 C12orf29Q8N999 325 aa18.35■□□□□ 0.53
LMNA-205ENST00000368299 STK32AQ8WU08 396 aa18.35■□□□□ 0.53
LMNA-205ENST00000368299 FAM118BQ9BPY3 351 aa18.35■□□□□ 0.53
LMNA-205ENST00000368299 APOL6Q9BWW8 343 aa18.35■□□□□ 0.53
LMNA-205ENST00000368299 GDAP2Q9NXN4 497 aa18.35■□□□□ 0.53
LMNA-205ENST00000368299 NOVA2Q9UNW9 492 aaKnown RBP18.35■□□□□ 0.53
LMNA-205ENST00000368299 E5RJQ4 531 aa18.35■□□□□ 0.53
LMNA-205ENST00000368299 SHBGP04278 402 aa18.35■□□□□ 0.53
LMNA-205ENST00000368299 PFKMP08237 780 aa18.35■□□□□ 0.53
LMNA-205ENST00000368299 KDELR1P24390 212 aa18.35■□□□□ 0.53
LMNA-205ENST00000368299 IL1R2P27930 398 aa18.35■□□□□ 0.53
LMNA-205ENST00000368299 HPDP32754 393 aaPredicted RBP18.35■□□□□ 0.53
LMNA-205ENST00000368299 UBXN11Q5T124 520 aa18.35■□□□□ 0.53
LMNA-205ENST00000368299 ARHGAP17Q68EM7 881 aa18.35■□□□□ 0.53
LMNA-205ENST00000368299 OR6B2Q6IFH4 312 aa18.35■□□□□ 0.53
LMNA-205ENST00000368299 ACOT1Q86TX2 421 aa18.35■□□□□ 0.53
LMNA-205ENST00000368299 CMASQ8NFW8 434 aaPredicted RBP18.35■□□□□ 0.53
LMNA-205ENST00000368299 OR6B3Q8NGW1 331 aa18.35■□□□□ 0.53
LMNA-205ENST00000368299 ROPN1BQ9BZX4 212 aaPredicted RBP18.35■□□□□ 0.53
LMNA-205ENST00000368299 STMN4Q9H169 189 aaPredicted RBP18.35■□□□□ 0.53
LMNA-205ENST00000368299 ROPN1Q9HAT0 212 aaPredicted RBP18.35■□□□□ 0.53
LMNA-205ENST00000368299 AAASQ9NRG9 546 aa18.35■□□□□ 0.53
LMNA-205ENST00000368299 USP18Q9UMW8 372 aa18.35■□□□□ 0.53
LMNA-205ENST00000368299 A0A087WUV0 522 aaPredicted RBP18.34■□□□□ 0.53
LMNA-205ENST00000368299 SRRM3A6NNA2 597 aaPredicted RBP18.34■□□□□ 0.53
LMNA-205ENST00000368299 CAPN15O75808 1086 aa18.34■□□□□ 0.53
LMNA-205ENST00000368299 CPP00450 1065 aa18.34■□□□□ 0.53
LMNA-205ENST00000368299 DESP17661 470 aa18.34■□□□□ 0.53
LMNA-205ENST00000368299 MIPP30301 263 aa18.34■□□□□ 0.53
LMNA-205ENST00000368299 MDH1P40925 334 aaKnown RBP18.34■□□□□ 0.53
LMNA-205ENST00000368299 CDR1P51861 262 aa18.34■□□□□ 0.53
LMNA-205ENST00000368299 CRHR2Q13324 411 aa18.34■□□□□ 0.53
LMNA-205ENST00000368299 OASLQ15646 514 aaKnown RBP18.34■□□□□ 0.53
LMNA-205ENST00000368299 SOWAHAQ2M3V2 549 aa18.34■□□□□ 0.53
LMNA-205ENST00000368299 FAM183BPQ6ZVS7 135 aa18.34■□□□□ 0.53
LMNA-205ENST00000368299 BBS12Q6ZW61 710 aa18.34■□□□□ 0.53
LMNA-205ENST00000368299 ZDHHC17Q8IUH5 632 aa18.34■□□□□ 0.53
LMNA-205ENST00000368299 ACSF2Q96CM8 615 aaPredicted RBP18.34■□□□□ 0.53
LMNA-205ENST00000368299 TLCD1Q96CP7 247 aa18.34■□□□□ 0.53
LMNA-205ENST00000368299 SLC4A5Q9BY07 1137 aa18.34■□□□□ 0.53
LMNA-205ENST00000368299 CDC42EP4Q9H3Q1 356 aaKnown RBP18.34■□□□□ 0.53
LMNA-205ENST00000368299 C2CD4BA6NLJ0 364 aa18.34■□□□□ 0.53
LMNA-205ENST00000368299 KPNA7A9QM74 516 aa18.34■□□□□ 0.53
LMNA-205ENST00000368299 M0QZ92 97 aa18.34■□□□□ 0.53
LMNA-205ENST00000368299 TRUB2O95900 331 aaKnown RBP18.34■□□□□ 0.53
LMNA-205ENST00000368299 PPP2R2AP63151 447 aa18.34■□□□□ 0.53
LMNA-205ENST00000368299 SMTNL2Q2TAL5 461 aa18.34■□□□□ 0.53
LMNA-205ENST00000368299 IZUMO3Q5VZ72 239 aa18.34■□□□□ 0.53
LMNA-205ENST00000368299 TTC19Q6DKK2 380 aaPredicted RBP18.34■□□□□ 0.53
LMNA-205ENST00000368299 TADA2BQ86TJ2 420 aa18.34■□□□□ 0.53
LMNA-205ENST00000368299 TMEM110Q86TL2 294 aa18.34■□□□□ 0.53
LMNA-205ENST00000368299 RELL1Q8IUW5 271 aa18.34■□□□□ 0.53
LMNA-205ENST00000368299 KCTD6Q8NC69 237 aa18.34■□□□□ 0.53
LMNA-205ENST00000368299 NCAPGQ9BPX3 1015 aa18.34■□□□□ 0.53
LMNA-205ENST00000368299 IPPQ9Y573 584 aa18.34■□□□□ 0.53
LMNA-205ENST00000368299 FAM169AQ9Y6X4 670 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms