RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 GABRB2P47870 512 aa10.05□□□□□ -0.8
VTA1-201ENST00000367621 RPL34P49207 117 aaKnown RBP10.05□□□□□ -0.8
VTA1-201ENST00000367621 SLC11A1P49279 550 aa10.05□□□□□ -0.8
VTA1-201ENST00000367621 SMCPP49901 116 aaPredicted RBP10.05□□□□□ -0.8
VTA1-201ENST00000367621 MAMLD1Q13495 774 aa10.05□□□□□ -0.8
VTA1-201ENST00000367621 IKBKEQ14164 716 aa10.05□□□□□ -0.8
VTA1-201ENST00000367621 STILQ15468 1287 aa10.05□□□□□ -0.8
VTA1-201ENST00000367621 GOLGA7BQ2TAP0 167 aa10.05□□□□□ -0.8
VTA1-201ENST00000367621 MEI1Q5TIA1 1274 aa10.05□□□□□ -0.8
VTA1-201ENST00000367621 DSTYKQ6XUX3 929 aa10.05□□□□□ -0.8
VTA1-201ENST00000367621 PHLDB2Q86SQ0 1253 aa10.05□□□□□ -0.8
VTA1-201ENST00000367621 CPNE8Q86YQ8 564 aa10.05□□□□□ -0.8
VTA1-201ENST00000367621 RHOT2Q8IXI1 618 aa10.05□□□□□ -0.8
VTA1-201ENST00000367621 FUKQ8N0W3 1084 aa10.05□□□□□ -0.8
VTA1-201ENST00000367621 UBA3Q8TBC4 463 aa10.05□□□□□ -0.8
VTA1-201ENST00000367621 SPATA18Q8TC71 538 aa10.05□□□□□ -0.8
VTA1-201ENST00000367621 HASPINQ8TF76 798 aa10.05□□□□□ -0.8
VTA1-201ENST00000367621 BCL7CQ8WUZ0 217 aaPredicted RBP10.05□□□□□ -0.8
VTA1-201ENST00000367621 SLC35F5Q8WV83 523 aa10.05□□□□□ -0.8
VTA1-201ENST00000367621 TOP1MTQ969P6 601 aa10.05□□□□□ -0.8
VTA1-201ENST00000367621 ZNF653Q96CK0 615 aa10.05□□□□□ -0.8
VTA1-201ENST00000367621 ZNF689Q96CS4 500 aaPredicted RBP10.05□□□□□ -0.8
VTA1-201ENST00000367621 CPXM1Q96SM3 734 aa10.05□□□□□ -0.8
VTA1-201ENST00000367621 C11orf70Q9BRQ4 267 aa10.05□□□□□ -0.8
VTA1-201ENST00000367621 NUP85Q9BW27 656 aa10.05□□□□□ -0.8
VTA1-201ENST00000367621 PDCL3Q9H2J4 239 aa10.05□□□□□ -0.8
VTA1-201ENST00000367621 PRDM5Q9NQX1 630 aaPredicted RBP10.05□□□□□ -0.8
VTA1-201ENST00000367621 FAM49BQ9NUQ9 324 aa10.05□□□□□ -0.8
VTA1-201ENST00000367621 JRKLQ9Y4A0 524 aa10.05□□□□□ -0.8
VTA1-201ENST00000367621 SCN1AP35498 2009 aa10.05□□□□□ -0.8
VTA1-201ENST00000367621 KIAA0100Q14667 2235 aaKnown RBP10.05□□□□□ -0.8
VTA1-201ENST00000367621 CITO14578 2027 aa10.04□□□□□ -0.8
VTA1-201ENST00000367621 COL4A6Q14031 1691 aa10.04□□□□□ -0.8
VTA1-201ENST00000367621 MYBPHLA2RUH7 354 aa10.04□□□□□ -0.8
VTA1-201ENST00000367621 TBKBP1A7MCY6 615 aa10.04□□□□□ -0.8
VTA1-201ENST00000367621 M0QYV0 167 aa10.04□□□□□ -0.8
VTA1-201ENST00000367621 NRP1O14786 923 aa10.04□□□□□ -0.8
VTA1-201ENST00000367621 HOXA2O43364 376 aa10.04□□□□□ -0.8
VTA1-201ENST00000367621 GJB6O95452 261 aa10.04□□□□□ -0.8
VTA1-201ENST00000367621 FTCDO95954 541 aa10.04□□□□□ -0.8
VTA1-201ENST00000367621 ERBB2P04626 1255 aa10.04□□□□□ -0.8
VTA1-201ENST00000367621 GALTP07902 379 aa10.04□□□□□ -0.8
VTA1-201ENST00000367621 ACRP10323 421 aa10.04□□□□□ -0.8
VTA1-201ENST00000367621 ODC1P11926 461 aa10.04□□□□□ -0.8
VTA1-201ENST00000367621 RAG1P15918 1043 aa10.04□□□□□ -0.8
VTA1-201ENST00000367621 NOP2P46087 812 aaKnown RBP10.04□□□□□ -0.8
VTA1-201ENST00000367621 LHX1P48742 406 aa10.04□□□□□ -0.8
VTA1-201ENST00000367621 EPHB4P54760 987 aa10.04□□□□□ -0.8
VTA1-201ENST00000367621 GSCP56915 257 aaPredicted RBP10.04□□□□□ -0.8
VTA1-201ENST00000367621 WDR5P61964 334 aaKnown RBP10.04□□□□□ -0.8
VTA1-201ENST00000367621 PSMC1P62191 440 aaKnown RBP10.04□□□□□ -0.8
VTA1-201ENST00000367621 DEFB103AP81534 67 aa10.04□□□□□ -0.8
VTA1-201ENST00000367621 PDCLQ13371 301 aa10.04□□□□□ -0.8
VTA1-201ENST00000367621 PUS10Q3MIT2 529 aaKnown RBP10.04□□□□□ -0.8
VTA1-201ENST00000367621 PPP1R2P3Q6NXS1 205 aa10.04□□□□□ -0.8
VTA1-201ENST00000367621 PMF1Q6P1K2 205 aa10.04□□□□□ -0.8
VTA1-201ENST00000367621 FAM171BQ6P995 826 aa10.04□□□□□ -0.8
VTA1-201ENST00000367621 TMCO2Q7Z6W1 182 aaPredicted RBP10.04□□□□□ -0.8
VTA1-201ENST00000367621 NT5DC3Q86UY8 548 aa10.04□□□□□ -0.8
VTA1-201ENST00000367621 LRRTM3Q86VH5 581 aa10.04□□□□□ -0.8
VTA1-201ENST00000367621 ANKRD52Q8NB46 1076 aa10.04□□□□□ -0.8
VTA1-201ENST00000367621 B3GALNT2Q8NCR0 500 aa10.04□□□□□ -0.8
VTA1-201ENST00000367621 OR10T2Q8NGX3 314 aa10.04□□□□□ -0.8
VTA1-201ENST00000367621 THAP11Q96EK4 314 aa10.04□□□□□ -0.8
VTA1-201ENST00000367621 TRIM11Q96F44 468 aa10.04□□□□□ -0.8
VTA1-201ENST00000367621 BTBD6Q96KE9 485 aa10.04□□□□□ -0.8
VTA1-201ENST00000367621 HNRNPABQ99729 332 aaKnown RBP10.04□□□□□ -0.8
VTA1-201ENST00000367621 B3GNT5Q9BYG0 378 aa10.04□□□□□ -0.8
VTA1-201ENST00000367621 CWH43Q9H720 699 aa10.04□□□□□ -0.8
VTA1-201ENST00000367621 IL23AQ9NPF7 189 aa10.04□□□□□ -0.8
VTA1-201ENST00000367621 DDX43Q9NXZ2 648 aaKnown RBP10.04□□□□□ -0.8
VTA1-201ENST00000367621 CTTNBP2NLQ9P2B4 639 aa10.04□□□□□ -0.8
VTA1-201ENST00000367621 UVRAGQ9P2Y5 699 aa10.04□□□□□ -0.8
VTA1-201ENST00000367621 LRFN2Q9ULH4 789 aa10.04□□□□□ -0.8
VTA1-201ENST00000367621 PRG3Q9Y2Y8 225 aaPredicted RBP10.04□□□□□ -0.8
VTA1-201ENST00000367621 MRFAP1Q9Y605 127 aa10.04□□□□□ -0.8
VTA1-201ENST00000367621 TET1Q8NFU7 2136 aa10.04□□□□□ -0.8
VTA1-201ENST00000367621 PDCD11Q14690 1871 aaKnown RBP10.04□□□□□ -0.8
VTA1-201ENST00000367621 TMEM191CA6NGB0 347 aa10.03□□□□□ -0.8
VTA1-201ENST00000367621 SRGAP2O75044 1071 aa10.03□□□□□ -0.8
VTA1-201ENST00000367621 URI1O94763 535 aaPredicted RBP10.03□□□□□ -0.8
VTA1-201ENST00000367621 OAZ2O95190 189 aa10.03□□□□□ -0.8
VTA1-201ENST00000367621 CALB1P05937 261 aa10.03□□□□□ -0.8
VTA1-201ENST00000367621 SETSIPP0DME0 302 aa10.03□□□□□ -0.8
VTA1-201ENST00000367621 PRLRP16471 622 aa10.03□□□□□ -0.8
VTA1-201ENST00000367621 OR1G1P47890 313 aa10.03□□□□□ -0.8
VTA1-201ENST00000367621 NAP1L1P55209 391 aaKnown RBP10.03□□□□□ -0.8
VTA1-201ENST00000367621 RNASELQ05823 741 aaKnown RBP10.03□□□□□ -0.8
VTA1-201ENST00000367621 PDE4CQ08493 712 aa10.03□□□□□ -0.8
VTA1-201ENST00000367621 MRPL58Q14197 206 aaKnown RBP10.03□□□□□ -0.8
VTA1-201ENST00000367621 IFI16Q16666 785 aaKnown RBP10.03□□□□□ -0.8
VTA1-201ENST00000367621 CYP4A22Q5TCH4 519 aa10.03□□□□□ -0.8
VTA1-201ENST00000367621 LIN9Q5TKA1 542 aa10.03□□□□□ -0.8
VTA1-201ENST00000367621 C11orf63Q6NUN7 778 aa10.03□□□□□ -0.8
VTA1-201ENST00000367621 TMEM110Q86TL2 294 aa10.03□□□□□ -0.8
VTA1-201ENST00000367621 TMEM173Q86WV6 379 aaPredicted RBP10.03□□□□□ -0.8
VTA1-201ENST00000367621 ERICH1Q86X53 443 aa10.03□□□□□ -0.8
VTA1-201ENST00000367621 XYLT1Q86Y38 959 aa10.03□□□□□ -0.8
VTA1-201ENST00000367621 TMEM199Q8N511 208 aa10.03□□□□□ -0.8
VTA1-201ENST00000367621 LRRN4CLQ8ND94 238 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms