RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 DNAJC24Q6P3W2 148 aa14.24□□□□□ -0.13
PRKN-205ENST00000366897 C15orf39Q6ZRI6 1047 aa14.24□□□□□ -0.13
PRKN-205ENST00000366897 CDHR3Q6ZTQ4 885 aa14.24□□□□□ -0.13
PRKN-205ENST00000366897 UNC45BQ8IWX7 931 aa14.24□□□□□ -0.13
PRKN-205ENST00000366897 FAM71DQ8N9W8 422 aa14.24□□□□□ -0.13
PRKN-205ENST00000366897 ATP11CQ8NB49 1132 aa14.24□□□□□ -0.13
PRKN-205ENST00000366897 ZNF606Q8WXB4 792 aa14.24□□□□□ -0.13
PRKN-205ENST00000366897 TTC1Q99614 292 aa14.24□□□□□ -0.13
PRKN-205ENST00000366897 IP6K2Q9UHH9 426 aa14.24□□□□□ -0.13
PRKN-205ENST00000366897 BAG2O95816 211 aa14.23□□□□□ -0.13
PRKN-205ENST00000366897 ITGBL1O95965 494 aaPredicted RBP14.23□□□□□ -0.13
PRKN-205ENST00000366897 C4BPAP04003 597 aaKnown RBP14.23□□□□□ -0.13
PRKN-205ENST00000366897 DLDP09622 509 aaKnown RBP14.23□□□□□ -0.13
PRKN-205ENST00000366897 SKIP12755 728 aa14.23□□□□□ -0.13
PRKN-205ENST00000366897 SERPINB4P48594 390 aa14.23□□□□□ -0.13
PRKN-205ENST00000366897 SLC18A1P54219 525 aa14.23□□□□□ -0.13
PRKN-205ENST00000366897 RASA2Q15283 850 aa14.23□□□□□ -0.13
PRKN-205ENST00000366897 LRRC36Q1X8D7 754 aa14.23□□□□□ -0.13
PRKN-205ENST00000366897 CCDC62Q6P9F0 684 aa14.23□□□□□ -0.13
PRKN-205ENST00000366897 ADGRD1Q6QNK2 874 aa14.23□□□□□ -0.13
PRKN-205ENST00000366897 ENOSF1Q7L5Y1 443 aa14.23□□□□□ -0.13
PRKN-205ENST00000366897 USP37Q86T82 979 aa14.23□□□□□ -0.13
PRKN-205ENST00000366897 SYTL5Q8TDW5 730 aaPredicted RBP14.23□□□□□ -0.13
PRKN-205ENST00000366897 SKA1Q96BD8 255 aa14.23□□□□□ -0.13
PRKN-205ENST00000366897 TMEM39BQ9GZU3 492 aa14.23□□□□□ -0.13
PRKN-205ENST00000366897 PCDH9Q9HC56 1237 aa14.23□□□□□ -0.13
PRKN-205ENST00000366897 PCSK1NQ9UHG2 260 aa14.23□□□□□ -0.13
PRKN-205ENST00000366897 ZNRF3Q9ULT6 936 aa14.23□□□□□ -0.13
PRKN-205ENST00000366897 BPIFB4P59827 614 aa14.23□□□□□ -0.13
PRKN-205ENST00000366897 TRAF1Q13077 416 aa14.23□□□□□ -0.13
PRKN-205ENST00000366897 PTK7Q13308 1070 aa14.23□□□□□ -0.13
PRKN-205ENST00000366897 LBRQ14739 615 aaKnown RBP14.23□□□□□ -0.13
PRKN-205ENST00000366897 TAF5Q15542 800 aa14.23□□□□□ -0.13
PRKN-205ENST00000366897 SGSM1Q2NKQ1 1148 aa14.23□□□□□ -0.13
PRKN-205ENST00000366897 KBTBD12Q3ZCT8 623 aa14.23□□□□□ -0.13
PRKN-205ENST00000366897 TFDP3Q5H9I0 405 aa14.23□□□□□ -0.13
PRKN-205ENST00000366897 SCARA5Q6ZMJ2 495 aa14.23□□□□□ -0.13
PRKN-205ENST00000366897 TMEM174Q8WUU8 243 aa14.23□□□□□ -0.13
PRKN-205ENST00000366897 TMEM143Q96AN5 459 aa14.23□□□□□ -0.13
PRKN-205ENST00000366897 VCXQ9H320 206 aa14.23□□□□□ -0.13
PRKN-205ENST00000366897 ACSS3Q9H6R3 686 aa14.23□□□□□ -0.13
PRKN-205ENST00000366897 XPNPEP1Q9NQW7 623 aa14.23□□□□□ -0.13
PRKN-205ENST00000366897 ARHGEF4Q9NR80 690 aa14.23□□□□□ -0.13
PRKN-205ENST00000366897 SEPT9Q9UHD8 586 aaPredicted RBP14.23□□□□□ -0.13
PRKN-205ENST00000366897 FARP1Q9Y4F1 1045 aaPredicted RBP14.23□□□□□ -0.13
PRKN-205ENST00000366897 SCINQ9Y6U3 715 aa14.23□□□□□ -0.13
PRKN-205ENST00000366897 CYB561D2O14569 222 aa14.22□□□□□ -0.13
PRKN-205ENST00000366897 MAP3K6O95382 1288 aa14.22□□□□□ -0.13
PRKN-205ENST00000366897 LMNAP02545 664 aaKnown RBP14.22□□□□□ -0.13
PRKN-205ENST00000366897 IL1R2P27930 398 aa14.22□□□□□ -0.13
PRKN-205ENST00000366897 CAP2P40123 477 aa14.22□□□□□ -0.13
PRKN-205ENST00000366897 HIRAP54198 1017 aaPredicted RBP14.22□□□□□ -0.13
PRKN-205ENST00000366897 YWHAGP61981 247 aaKnown RBP eCLIP14.22□□□□□ -0.13
PRKN-205ENST00000366897 SWSAP1Q6NVH7 229 aa14.22□□□□□ -0.13
PRKN-205ENST00000366897 ZNF677Q86XU0 584 aa14.22□□□□□ -0.13
PRKN-205ENST00000366897 PHF13Q86YI8 300 aaPredicted RBP14.22□□□□□ -0.13
PRKN-205ENST00000366897 CTAGE3PQ8IX95 158 aa14.22□□□□□ -0.13
PRKN-205ENST00000366897 EMC1Q8N766 993 aa14.22□□□□□ -0.13
PRKN-205ENST00000366897 SH3TC2Q8TF17 1288 aa14.22□□□□□ -0.13
PRKN-205ENST00000366897 OXNAD1Q96HP4 312 aaPredicted RBP14.22□□□□□ -0.13
PRKN-205ENST00000366897 TRIM56Q9BRZ2 755 aaKnown RBP14.22□□□□□ -0.13
PRKN-205ENST00000366897 CPSF2Q9P2I0 782 aaKnown RBP14.22□□□□□ -0.13
PRKN-205ENST00000366897 PPARGC1AQ9UBK2 798 aaKnown RBP14.22□□□□□ -0.13
PRKN-205ENST00000366897 XPO7Q9UIA9 1087 aaKnown RBP14.22□□□□□ -0.13
PRKN-205ENST00000366897 KCNG1Q9UIX4 513 aa14.22□□□□□ -0.13
PRKN-205ENST00000366897 MEI4A8MW99 385 aa14.22□□□□□ -0.13
PRKN-205ENST00000366897 WDR64B1ANS9 1081 aa14.22□□□□□ -0.13
PRKN-205ENST00000366897 MMP8P22894 467 aa14.22□□□□□ -0.13
PRKN-205ENST00000366897 ELK3P41970 407 aa14.22□□□□□ -0.13
PRKN-205ENST00000366897 IRX4P78413 519 aa14.22□□□□□ -0.13
PRKN-205ENST00000366897 MTERF2Q49AM1 385 aa14.22□□□□□ -0.13
PRKN-205ENST00000366897 CES4AQ5XG92 561 aa14.22□□□□□ -0.13
PRKN-205ENST00000366897 CEP128Q6ZU80 1094 aa14.22□□□□□ -0.13
PRKN-205ENST00000366897 PRPF39Q86UA1 669 aaKnown RBP14.22□□□□□ -0.13
PRKN-205ENST00000366897 TMEM130Q8N3G9 435 aa14.22□□□□□ -0.13
PRKN-205ENST00000366897 RSAD2Q8WXG1 361 aa14.22□□□□□ -0.13
PRKN-205ENST00000366897 RMDN3Q96TC7 470 aa14.22□□□□□ -0.13
PRKN-205ENST00000366897 TRIM4Q9C037 500 aa14.22□□□□□ -0.13
PRKN-205ENST00000366897 SYNCQ9H7C4 482 aa14.22□□□□□ -0.13
PRKN-205ENST00000366897 WDR35Q9P2L0 1181 aa14.22□□□□□ -0.13
PRKN-205ENST00000366897 SERPINA10Q9UK55 444 aa14.22□□□□□ -0.13
PRKN-205ENST00000366897 MAP3K7O43318 606 aa14.21□□□□□ -0.13
PRKN-205ENST00000366897 TOP3BO95985 862 aaKnown RBP14.21□□□□□ -0.13
PRKN-205ENST00000366897 PHBP35232 272 aa14.21□□□□□ -0.13
PRKN-205ENST00000366897 SNRPFP62306 86 aaKnown RBP14.21□□□□□ -0.13
PRKN-205ENST00000366897 ORC1Q13415 861 aa14.21□□□□□ -0.13
PRKN-205ENST00000366897 FAXCQ5TGI0 409 aa14.21□□□□□ -0.13
PRKN-205ENST00000366897 PPIL6Q8IXY8 311 aa14.21□□□□□ -0.13
PRKN-205ENST00000366897 CFAP61Q8NHU2 1237 aa14.21□□□□□ -0.13
PRKN-205ENST00000366897 SLC35B2Q8TB61 432 aa14.21□□□□□ -0.13
PRKN-205ENST00000366897 CFAP36Q96G28 342 aa14.21□□□□□ -0.13
PRKN-205ENST00000366897 ACAP3Q96P50 834 aa14.21□□□□□ -0.13
PRKN-205ENST00000366897 THTPAQ9BU02 230 aa14.21□□□□□ -0.13
PRKN-205ENST00000366897 ZNF341Q9BYN7 854 aa14.21□□□□□ -0.13
PRKN-205ENST00000366897 SLC13A1Q9BZW2 595 aa14.21□□□□□ -0.13
PRKN-205ENST00000366897 POLR3FQ9H1D9 316 aaPredicted RBP14.21□□□□□ -0.13
PRKN-205ENST00000366897 NMRK2Q9NPI5 230 aa14.21□□□□□ -0.13
PRKN-205ENST00000366897 RBAKQ9NYW8 714 aaPredicted RBP14.21□□□□□ -0.13
PRKN-205ENST00000366897 AGO2Q9UKV8 859 aaKnown RBP14.21□□□□□ -0.13
PRKN-205ENST00000366897 SNCAIPQ9Y6H5 919 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms