RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 MGAQ8IWI9 3026 aa9.2□□□□□ -0.94
HMGB1P39-201ENST00000366304 TSC2P49815 1807 aa9.2□□□□□ -0.94
HMGB1P39-201ENST00000366304 TTC26A0AVF1 554 aa9.2□□□□□ -0.94
HMGB1P39-201ENST00000366304 ARHGEF35A5YM69 484 aa9.2□□□□□ -0.94
HMGB1P39-201ENST00000366304 PYCARD-AS1I3L0S3 204 aa9.2□□□□□ -0.94
HMGB1P39-201ENST00000366304 CTDNEP1O95476 244 aa9.2□□□□□ -0.94
HMGB1P39-201ENST00000366304 KLF8O95600 359 aaPredicted RBP9.2□□□□□ -0.94
HMGB1P39-201ENST00000366304 HAPLN1P10915 354 aaPredicted RBP9.2□□□□□ -0.94
HMGB1P39-201ENST00000366304 TYMPP19971 482 aa9.2□□□□□ -0.94
HMGB1P39-201ENST00000366304 GGCXP38435 758 aa9.2□□□□□ -0.94
HMGB1P39-201ENST00000366304 TNFSF9P41273 254 aa9.2□□□□□ -0.94
HMGB1P39-201ENST00000366304 PEX3P56589 373 aa9.2□□□□□ -0.94
HMGB1P39-201ENST00000366304 LILRA4P59901 499 aa9.2□□□□□ -0.94
HMGB1P39-201ENST00000366304 GFPT1Q06210 699 aaPredicted RBP9.2□□□□□ -0.94
HMGB1P39-201ENST00000366304 MAPK7Q13164 816 aa9.2□□□□□ -0.94
HMGB1P39-201ENST00000366304 ZNF268Q14587 947 aaPredicted RBP9.2□□□□□ -0.94
HMGB1P39-201ENST00000366304 CCDC142Q17RM4 750 aa9.2□□□□□ -0.94
HMGB1P39-201ENST00000366304 DUOXA1Q1HG43 343 aa9.2□□□□□ -0.94
HMGB1P39-201ENST00000366304 MGAT5BQ3V5L5 792 aa9.2□□□□□ -0.94
HMGB1P39-201ENST00000366304 CC2D1AQ6P1N0 951 aaPredicted RBP9.2□□□□□ -0.94
HMGB1P39-201ENST00000366304 MPZL3Q6UWV2 235 aa9.2□□□□□ -0.94
HMGB1P39-201ENST00000366304 TOGARAM2Q6ZUX3 1019 aa9.2□□□□□ -0.94
HMGB1P39-201ENST00000366304 USP37Q86T82 979 aa9.2□□□□□ -0.94
HMGB1P39-201ENST00000366304 C12orf40Q86WS4 652 aa9.2□□□□□ -0.94
HMGB1P39-201ENST00000366304 NAXDQ8IW45 347 aa9.2□□□□□ -0.94
HMGB1P39-201ENST00000366304 FAM177A1Q8N128 213 aaPredicted RBP9.2□□□□□ -0.94
HMGB1P39-201ENST00000366304 TXNDC5Q8NBS9 432 aaKnown RBP9.2□□□□□ -0.94
HMGB1P39-201ENST00000366304 HMGB4Q8WW32 186 aa9.2□□□□□ -0.94
HMGB1P39-201ENST00000366304 NACC1Q96RE7 527 aa9.2□□□□□ -0.94
HMGB1P39-201ENST00000366304 UBL7Q96S82 380 aaPredicted RBP9.2□□□□□ -0.94
HMGB1P39-201ENST00000366304 REPIN1Q9BWE0 567 aaKnown RBP9.2□□□□□ -0.94
HMGB1P39-201ENST00000366304 POLMQ9NP87 494 aaPredicted RBP9.2□□□□□ -0.94
HMGB1P39-201ENST00000366304 CD93Q9NPY3 652 aa9.2□□□□□ -0.94
HMGB1P39-201ENST00000366304 HSFX1Q9UBD0 423 aa9.2□□□□□ -0.94
HMGB1P39-201ENST00000366304 HCN2Q9UL51 889 aa9.2□□□□□ -0.94
HMGB1P39-201ENST00000366304 PHLPP2Q6ZVD8 1323 aa9.2□□□□□ -0.94
HMGB1P39-201ENST00000366304 SPTA1P02549 2419 aa9.2□□□□□ -0.94
HMGB1P39-201ENST00000366304 HELZP42694 1942 aaKnown RBP9.19□□□□□ -0.94
HMGB1P39-201ENST00000366304 PI4KAP42356 2102 aa9.19□□□□□ -0.94
HMGB1P39-201ENST00000366304 FAM149AA5PLN7 773 aa9.19□□□□□ -0.94
HMGB1P39-201ENST00000366304 TRABD2BA6NFA1 517 aa9.19□□□□□ -0.94
HMGB1P39-201ENST00000366304 LACTBL1A8MY62 500 aa9.19□□□□□ -0.94
HMGB1P39-201ENST00000366304 SCAMP3O14828 347 aaKnown RBP9.19□□□□□ -0.94
HMGB1P39-201ENST00000366304 ATXN7O15265 892 aaPredicted RBP9.19□□□□□ -0.94
HMGB1P39-201ENST00000366304 DKK1O94907 266 aa9.19□□□□□ -0.94
HMGB1P39-201ENST00000366304 FDPSP14324 419 aaKnown RBP9.19□□□□□ -0.94
HMGB1P39-201ENST00000366304 RDXP35241 583 aaKnown RBP9.19□□□□□ -0.94
HMGB1P39-201ENST00000366304 KIR2DL1P43626 348 aaPredicted RBP9.19□□□□□ -0.94
HMGB1P39-201ENST00000366304 TUFMP49411 452 aaKnown RBP9.19□□□□□ -0.94
HMGB1P39-201ENST00000366304 ATXN3P54252 364 aaPredicted RBP9.19□□□□□ -0.94
HMGB1P39-201ENST00000366304 AMPD2Q01433 879 aa9.19□□□□□ -0.94
HMGB1P39-201ENST00000366304 PPP2R5AQ15172 486 aa9.19□□□□□ -0.94
HMGB1P39-201ENST00000366304 DSTYKQ6XUX3 929 aa9.19□□□□□ -0.94
HMGB1P39-201ENST00000366304 TMPRSS7Q7RTY8 843 aa9.19□□□□□ -0.94
HMGB1P39-201ENST00000366304 PIP4K2CQ8TBX8 421 aa9.19□□□□□ -0.94
HMGB1P39-201ENST00000366304 WHAMMQ8TF30 809 aa9.19□□□□□ -0.94
HMGB1P39-201ENST00000366304 ATP2A3Q93084 1043 aa9.19□□□□□ -0.94
HMGB1P39-201ENST00000366304 IFT74Q96LB3 600 aa9.19□□□□□ -0.94
HMGB1P39-201ENST00000366304 SENP8Q96LD8 212 aa9.19□□□□□ -0.94
HMGB1P39-201ENST00000366304 NAP1L4Q99733 375 aaKnown RBP9.19□□□□□ -0.94
HMGB1P39-201ENST00000366304 TMUB1Q9BVT8 246 aa9.19□□□□□ -0.94
HMGB1P39-201ENST00000366304 OXCT2Q9BYC2 517 aaPredicted RBP9.19□□□□□ -0.94
HMGB1P39-201ENST00000366304 MRPL4Q9BYD3 311 aaKnown RBP9.19□□□□□ -0.94
HMGB1P39-201ENST00000366304 BHMT2Q9H2M3 363 aa9.19□□□□□ -0.94
HMGB1P39-201ENST00000366304 KIF9Q9HAQ2 790 aa9.19□□□□□ -0.94
HMGB1P39-201ENST00000366304 IL21RQ9HBE5 538 aa9.19□□□□□ -0.94
HMGB1P39-201ENST00000366304 GCNT4Q9P109 453 aa9.19□□□□□ -0.94
HMGB1P39-201ENST00000366304 PCOLCE2Q9UKZ9 415 aa9.19□□□□□ -0.94
HMGB1P39-201ENST00000366304 ATMQ13315 3056 aa9.19□□□□□ -0.94
HMGB1P39-201ENST00000366304 PTPRBP23467 1997 aa9.19□□□□□ -0.94
HMGB1P39-201ENST00000366304 TCRBV21S2A2A0A5A6 115 aa9.18□□□□□ -0.94
HMGB1P39-201ENST00000366304 C2orf78A6NCI8 922 aa9.18□□□□□ -0.94
HMGB1P39-201ENST00000366304 CCDC169A6NNP5 214 aa9.18□□□□□ -0.94
HMGB1P39-201ENST00000366304 SFI1A8K8P3 1242 aa9.18□□□□□ -0.94
HMGB1P39-201ENST00000366304 CPLX1O14810 134 aa9.18□□□□□ -0.94
HMGB1P39-201ENST00000366304 SLC16A4O15374 487 aa9.18□□□□□ -0.94
HMGB1P39-201ENST00000366304 FAM189A1O60320 539 aa9.18□□□□□ -0.94
HMGB1P39-201ENST00000366304 NEMFO60524 1076 aa9.18□□□□□ -0.94
HMGB1P39-201ENST00000366304 OBSL1O75147 1896 aa9.18□□□□□ -0.94
HMGB1P39-201ENST00000366304 S1PR4O95977 384 aa9.18□□□□□ -0.94
HMGB1P39-201ENST00000366304 ADH1BP00325 375 aa9.18□□□□□ -0.94
HMGB1P39-201ENST00000366304 CYP17A1P05093 508 aa9.18□□□□□ -0.94
HMGB1P39-201ENST00000366304 CYP11A1P05108 521 aa9.18□□□□□ -0.94
HMGB1P39-201ENST00000366304 ATXN1LP0C7T5 689 aaKnown RBP9.18□□□□□ -0.94
HMGB1P39-201ENST00000366304 PRKCSHP14314 528 aaPredicted RBP9.18□□□□□ -0.94
HMGB1P39-201ENST00000366304 DDX6P26196 483 aaKnown RBP eCLIP9.18□□□□□ -0.94
HMGB1P39-201ENST00000366304 RPA1P27694 616 aa9.18□□□□□ -0.94
HMGB1P39-201ENST00000366304 HOXD12P35452 270 aa9.18□□□□□ -0.94
HMGB1P39-201ENST00000366304 BNC1Q01954 994 aa9.18□□□□□ -0.94
HMGB1P39-201ENST00000366304 RPL6Q02878 288 aaKnown RBP9.18□□□□□ -0.94
HMGB1P39-201ENST00000366304 FAM160A1Q05DH4 1040 aa9.18□□□□□ -0.94
HMGB1P39-201ENST00000366304 SCRN1Q12765 414 aa9.18□□□□□ -0.94
HMGB1P39-201ENST00000366304 VEPH1Q14D04 833 aa9.18□□□□□ -0.94
HMGB1P39-201ENST00000366304 SAFBQ15424 915 aaKnown RBP eCLIP9.18□□□□□ -0.94
HMGB1P39-201ENST00000366304 ENOX2Q16206 610 aaKnown RBP9.18□□□□□ -0.94
HMGB1P39-201ENST00000366304 SPDYCQ5MJ68 293 aa9.18□□□□□ -0.94
HMGB1P39-201ENST00000366304 ARMCX5Q6P1M9 558 aa9.18□□□□□ -0.94
HMGB1P39-201ENST00000366304 APBB1IPQ7Z5R6 666 aaPredicted RBP9.18□□□□□ -0.94
HMGB1P39-201ENST00000366304 GLRX5Q86SX6 157 aa9.18□□□□□ -0.94
HMGB1P39-201ENST00000366304 ARL14EPQ8N8R7 260 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms