RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 EIF3LQ9Y262 564 aaKnown RBP11.38□□□□□ -0.59
CLIP1-203ENST00000361654 PDZK1P1A8MUH7 402 aa11.38□□□□□ -0.59
CLIP1-203ENST00000361654 ARHGEF9O43307 516 aa11.38□□□□□ -0.59
CLIP1-203ENST00000361654 ERN1O75460 977 aaKnown RBP11.38□□□□□ -0.59
CLIP1-203ENST00000361654 HALP42357 657 aa11.38□□□□□ -0.59
CLIP1-203ENST00000361654 RFX3P48380 749 aa11.38□□□□□ -0.59
CLIP1-203ENST00000361654 CLCN3P51790 818 aa11.38□□□□□ -0.59
CLIP1-203ENST00000361654 KCNK10P57789 538 aa11.38□□□□□ -0.59
CLIP1-203ENST00000361654 HERVK_113P62684 666 aa11.38□□□□□ -0.59
CLIP1-203ENST00000361654 CXCL9Q07325 125 aa11.38□□□□□ -0.59
CLIP1-203ENST00000361654 CACHD1Q5VU97 1274 aa11.38□□□□□ -0.59
CLIP1-203ENST00000361654 PRMT6Q96LA8 375 aaPredicted RBP11.38□□□□□ -0.59
CLIP1-203ENST00000361654 TGS1Q96RS0 853 aaKnown RBP11.38□□□□□ -0.59
CLIP1-203ENST00000361654 PHF20Q9BVI0 1012 aa11.38□□□□□ -0.59
CLIP1-203ENST00000361654 ALDH8A1Q9H2A2 487 aaPredicted RBP11.38□□□□□ -0.59
CLIP1-203ENST00000361654 ARMC7Q9H6L4 198 aa11.38□□□□□ -0.59
CLIP1-203ENST00000361654 SMARCAL1Q9NZC9 954 aa11.38□□□□□ -0.59
CLIP1-203ENST00000361654 FKTNO75072 461 aa11.38□□□□□ -0.59
CLIP1-203ENST00000361654 ITIH2P19823 946 aa11.38□□□□□ -0.59
CLIP1-203ENST00000361654 MAPK9P45984 424 aa11.38□□□□□ -0.59
CLIP1-203ENST00000361654 CSE1LP55060 971 aaKnown RBP11.38□□□□□ -0.59
CLIP1-203ENST00000361654 RARS2Q5T160 578 aaKnown RBP11.38□□□□□ -0.59
CLIP1-203ENST00000361654 METTL7BQ6UX53 244 aa11.38□□□□□ -0.59
CLIP1-203ENST00000361654 CCDC149Q6ZUS6 474 aa11.38□□□□□ -0.59
CLIP1-203ENST00000361654 ATG9AQ7Z3C6 839 aa11.38□□□□□ -0.59
CLIP1-203ENST00000361654 ANKMY2Q8IV38 441 aa11.38□□□□□ -0.59
CLIP1-203ENST00000361654 FAM162AQ96A26 154 aa11.38□□□□□ -0.59
CLIP1-203ENST00000361654 DMAP1Q9NPF5 467 aaPredicted RBP11.38□□□□□ -0.59
CLIP1-203ENST00000361654 AURKCQ9UQB9 309 aa11.38□□□□□ -0.59
CLIP1-203ENST00000361654 MYO1GB0I1T2 1018 aa11.38□□□□□ -0.59
CLIP1-203ENST00000361654 PMPCBO75439 489 aa11.38□□□□□ -0.59
CLIP1-203ENST00000361654 PRR29P0C7W0 189 aa11.38□□□□□ -0.59
CLIP1-203ENST00000361654 GUCY2CP25092 1073 aa11.38□□□□□ -0.59
CLIP1-203ENST00000361654 FNTAP49354 379 aa11.38□□□□□ -0.59
CLIP1-203ENST00000361654 FAM83AQ86UY5 434 aa11.38□□□□□ -0.59
CLIP1-203ENST00000361654 SYTL1Q8IYJ3 562 aa11.38□□□□□ -0.59
CLIP1-203ENST00000361654 DCLK3Q9C098 648 aa11.38□□□□□ -0.59
CLIP1-203ENST00000361654 ZC4H2Q9NQZ6 224 aa11.38□□□□□ -0.59
CLIP1-203ENST00000361654 METTL5Q9NRN9 209 aaKnown RBP11.38□□□□□ -0.59
CLIP1-203ENST00000361654 C16orf96A6NNT2 1141 aa11.37□□□□□ -0.59
CLIP1-203ENST00000361654 ZNF200P98182 395 aaPredicted RBP11.37□□□□□ -0.59
CLIP1-203ENST00000361654 STX3Q13277 289 aa11.37□□□□□ -0.59
CLIP1-203ENST00000361654 CAMKK1Q8N5S9 505 aa11.37□□□□□ -0.59
CLIP1-203ENST00000361654 PPP1R14AQ96A00 147 aa11.37□□□□□ -0.59
CLIP1-203ENST00000361654 MRPL48Q96GC5 212 aaKnown RBP11.37□□□□□ -0.59
CLIP1-203ENST00000361654 GAS2L1Q99501 681 aaPredicted RBP11.37□□□□□ -0.59
CLIP1-203ENST00000361654 SYBUQ9NX95 663 aa11.37□□□□□ -0.59
CLIP1-203ENST00000361654 ADGRA2Q96PE1 1338 aa11.37□□□□□ -0.59
CLIP1-203ENST00000361654 NCOA3Q9Y6Q9 1424 aa11.37□□□□□ -0.59
CLIP1-203ENST00000361654 RPN2P04844 631 aa11.37□□□□□ -0.59
CLIP1-203ENST00000361654 PLA2G4AP47712 749 aa11.37□□□□□ -0.59
CLIP1-203ENST00000361654 NOGQ13253 232 aa11.37□□□□□ -0.59
CLIP1-203ENST00000361654 BYSLQ13895 437 aaKnown RBP11.37□□□□□ -0.59
CLIP1-203ENST00000361654 HORMAD1Q86X24 394 aa11.37□□□□□ -0.59
CLIP1-203ENST00000361654 ZNF614Q8N883 585 aa11.37□□□□□ -0.59
CLIP1-203ENST00000361654 FEZF2Q8TBJ5 459 aa11.37□□□□□ -0.59
CLIP1-203ENST00000361654 VPS50Q96JG6 964 aa11.37□□□□□ -0.59
CLIP1-203ENST00000361654 COPG1Q9Y678 874 aaKnown RBP11.37□□□□□ -0.59
CLIP1-203ENST00000361654 TTC26A0AVF1 554 aa11.37□□□□□ -0.59
CLIP1-203ENST00000361654 SNTNA6NMZ2 147 aa11.37□□□□□ -0.59
CLIP1-203ENST00000361654 MAN1A2O60476 641 aa11.37□□□□□ -0.59
CLIP1-203ENST00000361654 JAK1P23458 1154 aa11.37□□□□□ -0.59
CLIP1-203ENST00000361654 CLEC16AQ2KHT3 1053 aa11.37□□□□□ -0.59
CLIP1-203ENST00000361654 OVOS1Q6IE37 1185 aa11.37□□□□□ -0.59
CLIP1-203ENST00000361654 NUP93Q8N1F7 819 aa11.37□□□□□ -0.59
CLIP1-203ENST00000361654 AHSPQ9NZD4 102 aa11.37□□□□□ -0.59
CLIP1-203ENST00000361654 LOC102724159A0A0B4J2E5 919 aa11.37□□□□□ -0.59
CLIP1-203ENST00000361654 ATP5BP06576 529 aaKnown RBP11.37□□□□□ -0.59
CLIP1-203ENST00000361654 AXLP30530 894 aa11.37□□□□□ -0.59
CLIP1-203ENST00000361654 PWP2Q15269 919 aaKnown RBP11.37□□□□□ -0.59
CLIP1-203ENST00000361654 PABPC1LQ4VXU2 614 aaKnown RBP11.37□□□□□ -0.59
CLIP1-203ENST00000361654 C16orf62Q7Z3J2 963 aa11.37□□□□□ -0.59
CLIP1-203ENST00000361654 SUSD6Q92537 303 aa11.37□□□□□ -0.59
CLIP1-203ENST00000361654 ABCB6Q9NP58 842 aa11.37□□□□□ -0.59
CLIP1-203ENST00000361654 PRMT3O60678 531 aa11.36□□□□□ -0.59
CLIP1-203ENST00000361654 RBP3P10745 1247 aa11.36□□□□□ -0.59
CLIP1-203ENST00000361654 CTSEP14091 401 aa11.36□□□□□ -0.59
CLIP1-203ENST00000361654 SLC9A1P19634 815 aa11.36□□□□□ -0.59
CLIP1-203ENST00000361654 FGFR2P21802 821 aa11.36□□□□□ -0.59
CLIP1-203ENST00000361654 PTPN7P35236 360 aa11.36□□□□□ -0.59
CLIP1-203ENST00000361654 THOP1P52888 689 aa11.36□□□□□ -0.59
CLIP1-203ENST00000361654 MAGOHP61326 146 aaKnown RBP11.36□□□□□ -0.59
CLIP1-203ENST00000361654 ZNF669Q96BR6 464 aaPredicted RBP11.36□□□□□ -0.59
CLIP1-203ENST00000361654 TRABDQ9H4I3 376 aa11.36□□□□□ -0.59
CLIP1-203ENST00000361654 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.36□□□□□ -0.59
CLIP1-203ENST00000361654 NDOR1Q9UHB4 597 aa11.36□□□□□ -0.59
CLIP1-203ENST00000361654 DBR1Q9UK59 544 aaKnown RBP11.36□□□□□ -0.59
CLIP1-203ENST00000361654 BLOC1S6Q9UL45 172 aa11.36□□□□□ -0.59
CLIP1-203ENST00000361654 TBC1D12O60347 775 aa11.36□□□□□ -0.59
CLIP1-203ENST00000361654 RTN3O95197 1032 aaPredicted RBP11.36□□□□□ -0.59
CLIP1-203ENST00000361654 APOA1P02647 267 aa11.36□□□□□ -0.59
CLIP1-203ENST00000361654 GYS1P13807 737 aa11.36□□□□□ -0.59
CLIP1-203ENST00000361654 PBLDP30039 288 aaPredicted RBP11.36□□□□□ -0.59
CLIP1-203ENST00000361654 DDX39BQ13838 428 aaKnown RBP11.36□□□□□ -0.59
CLIP1-203ENST00000361654 AGAP9Q5VTM2 703 aa11.36□□□□□ -0.59
CLIP1-203ENST00000361654 RD3Q7Z3Z2 195 aa11.36□□□□□ -0.59
CLIP1-203ENST00000361654 TRIM69Q86WT6 500 aa11.36□□□□□ -0.59
CLIP1-203ENST00000361654 FMR1NBQ8N0W7 255 aaPredicted RBP11.36□□□□□ -0.59
CLIP1-203ENST00000361654 C17orf80Q9BSJ5 609 aa11.36□□□□□ -0.59
CLIP1-203ENST00000361654 OSBPL8Q9BZF1 889 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms