RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 TARBP2Q15633 366 aaKnown RBP13.05□□□□□ -0.32
UBA3-202ENST00000361055 FSCN1Q16658 493 aaKnown RBP13.05□□□□□ -0.32
UBA3-202ENST00000361055 STAMBPL1Q96FJ0 436 aa13.05□□□□□ -0.32
UBA3-202ENST00000361055 RSRC1Q96IZ7 334 aaKnown RBP13.05□□□□□ -0.32
UBA3-202ENST00000361055 RMDN2Q96LZ7 410 aa13.05□□□□□ -0.32
UBA3-202ENST00000361055 POLR3FQ9H1D9 316 aaPredicted RBP13.05□□□□□ -0.32
UBA3-202ENST00000361055 UPF3AQ9H1J1 476 aaKnown RBP13.05□□□□□ -0.32
UBA3-202ENST00000361055 TUT1Q9H6E5 874 aaKnown RBP13.05□□□□□ -0.32
UBA3-202ENST00000361055 APOBEC3GQ9HC16 384 aaKnown RBP13.05□□□□□ -0.32
UBA3-202ENST00000361055 SAYSD1Q9NPB0 183 aa13.05□□□□□ -0.32
UBA3-202ENST00000361055 NOP53Q9NZM5 478 aaKnown RBP13.05□□□□□ -0.32
UBA3-202ENST00000361055 ZNF148Q9UQR1 794 aa13.05□□□□□ -0.32
UBA3-202ENST00000361055 USTQ9Y2C2 406 aa13.05□□□□□ -0.32
UBA3-202ENST00000361055 EXOC1LA0A1B0GW35 172 aa13.04□□□□□ -0.32
UBA3-202ENST00000361055 UNC5CO95185 931 aa13.04□□□□□ -0.32
UBA3-202ENST00000361055 C6orf222P0C671 652 aaPredicted RBP13.04□□□□□ -0.32
UBA3-202ENST00000361055 MMP8P22894 467 aa13.04□□□□□ -0.32
UBA3-202ENST00000361055 SSR1P43307 286 aaKnown RBP13.04□□□□□ -0.32
UBA3-202ENST00000361055 YARSP54577 528 aaKnown RBP13.04□□□□□ -0.32
UBA3-202ENST00000361055 SPARCL1Q14515 664 aa13.04□□□□□ -0.32
UBA3-202ENST00000361055 CRYMQ14894 314 aa13.04□□□□□ -0.32
UBA3-202ENST00000361055 TMED2Q15363 201 aa13.04□□□□□ -0.32
UBA3-202ENST00000361055 ZKSCAN8Q15776 578 aaPredicted RBP13.04□□□□□ -0.32
UBA3-202ENST00000361055 ACCSLQ4AC99 568 aa13.04□□□□□ -0.32
UBA3-202ENST00000361055 DAB2IPQ5VWQ8 1189 aa13.04□□□□□ -0.32
UBA3-202ENST00000361055 TMEM270Q6UE05 265 aa13.04□□□□□ -0.32
UBA3-202ENST00000361055 ALLCQ8N6M5 410 aa13.04□□□□□ -0.32
UBA3-202ENST00000361055 MAB21L3Q8N8X9 362 aa13.04□□□□□ -0.32
UBA3-202ENST00000361055 RBBP8NLQ8NC74 664 aaPredicted RBP13.04□□□□□ -0.32
UBA3-202ENST00000361055 FBF1Q8TES7 1133 aa13.04□□□□□ -0.32
UBA3-202ENST00000361055 SLITRK1Q96PX8 696 aa13.04□□□□□ -0.32
UBA3-202ENST00000361055 RAB3IPQ96QF0 476 aaPredicted RBP13.04□□□□□ -0.32
UBA3-202ENST00000361055 RNPEPQ9H4A4 650 aa13.04□□□□□ -0.32
UBA3-202ENST00000361055 HMX1Q9NP08 348 aaPredicted RBP13.04□□□□□ -0.32
UBA3-202ENST00000361055 TXLNGQ9NUQ3 528 aa13.04□□□□□ -0.32
UBA3-202ENST00000361055 DNPEPQ9ULA0 475 aa13.04□□□□□ -0.32
UBA3-202ENST00000361055 C15orf41Q9Y2V0 281 aa13.04□□□□□ -0.32
UBA3-202ENST00000361055 FRMPD3Q5JV73 1810 aa13.04□□□□□ -0.32
UBA3-202ENST00000361055 KIF1CO43896 1103 aaKnown RBP13.04□□□□□ -0.32
UBA3-202ENST00000361055 MSCO60682 206 aa13.04□□□□□ -0.32
UBA3-202ENST00000361055 KPNA6O60684 536 aa13.04□□□□□ -0.32
UBA3-202ENST00000361055 WFS1O76024 890 aa13.04□□□□□ -0.32
UBA3-202ENST00000361055 GBP2P32456 591 aaPredicted RBP13.04□□□□□ -0.32
UBA3-202ENST00000361055 RFC5P40937 340 aa13.04□□□□□ -0.32
UBA3-202ENST00000361055 NLRP11P59045 1033 aaKnown RBP13.04□□□□□ -0.32
UBA3-202ENST00000361055 BEX3Q00994 111 aa13.04□□□□□ -0.32
UBA3-202ENST00000361055 SETDB1Q15047 1291 aa13.04□□□□□ -0.32
UBA3-202ENST00000361055 PARP6Q2NL67 630 aa13.04□□□□□ -0.32
UBA3-202ENST00000361055 LMBRD2Q68DH5 695 aaPredicted RBP13.04□□□□□ -0.32
UBA3-202ENST00000361055 SMYD5Q6GMV2 418 aa13.04□□□□□ -0.32
UBA3-202ENST00000361055 SPOPLQ6IQ16 392 aa13.04□□□□□ -0.32
UBA3-202ENST00000361055 EXOC8Q8IYI6 725 aa13.04□□□□□ -0.32
UBA3-202ENST00000361055 FAM118BQ9BPY3 351 aa13.04□□□□□ -0.32
UBA3-202ENST00000361055 TRABDQ9H4I3 376 aa13.04□□□□□ -0.32
UBA3-202ENST00000361055 DHX33Q9H6R0 707 aaKnown RBP13.04□□□□□ -0.32
UBA3-202ENST00000361055 XPNPEP3Q9NQH7 507 aa13.04□□□□□ -0.32
UBA3-202ENST00000361055 SLC24A2Q9UI40 661 aa13.04□□□□□ -0.32
UBA3-202ENST00000361055 L3MBTL1Q9Y468 752 aa13.04□□□□□ -0.32
UBA3-202ENST00000361055 USH1CQ9Y6N9 552 aa13.04□□□□□ -0.32
UBA3-202ENST00000361055 F2P00734 622 aa13.03□□□□□ -0.32
UBA3-202ENST00000361055 HSPA8P11142 646 aaKnown RBP13.03□□□□□ -0.32
UBA3-202ENST00000361055 ACOT2P49753 483 aa13.03□□□□□ -0.32
UBA3-202ENST00000361055 ARSEP51690 589 aa13.03□□□□□ -0.32
UBA3-202ENST00000361055 POLGP54098 1239 aaPredicted RBP13.03□□□□□ -0.32
UBA3-202ENST00000361055 WNT7BP56706 349 aa13.03□□□□□ -0.32
UBA3-202ENST00000361055 ATP11AP98196 1134 aa13.03□□□□□ -0.32
UBA3-202ENST00000361055 ZC3H12AQ5D1E8 599 aaKnown RBP13.03□□□□□ -0.32
UBA3-202ENST00000361055 GNASQ5JWF2 1037 aa13.03□□□□□ -0.32
UBA3-202ENST00000361055 PRUNE1Q86TP1 453 aa13.03□□□□□ -0.32
UBA3-202ENST00000361055 PASD1Q8IV76 773 aa13.03□□□□□ -0.32
UBA3-202ENST00000361055 NSMCE1Q8WV22 266 aa13.03□□□□□ -0.32
UBA3-202ENST00000361055 ZNF606Q8WXB4 792 aa13.03□□□□□ -0.32
UBA3-202ENST00000361055 SLC7A3Q8WY07 619 aa13.03□□□□□ -0.32
UBA3-202ENST00000361055 NKD2Q969F2 451 aaPredicted RBP13.03□□□□□ -0.32
UBA3-202ENST00000361055 FAM84AQ96KN4 292 aa13.03□□□□□ -0.32
UBA3-202ENST00000361055 CGRRF1Q99675 332 aa13.03□□□□□ -0.32
UBA3-202ENST00000361055 BATF3Q9NR55 127 aa13.03□□□□□ -0.32
UBA3-202ENST00000361055 DONSONQ9NYP3 566 aa13.03□□□□□ -0.32
UBA3-202ENST00000361055 ZBTB42B2RXF5 422 aa13.03□□□□□ -0.32
UBA3-202ENST00000361055 ADAMTS4O75173 837 aa13.03□□□□□ -0.32
UBA3-202ENST00000361055 PGK1P00558 417 aa13.03□□□□□ -0.32
UBA3-202ENST00000361055 CALB1P05937 261 aa13.03□□□□□ -0.32
UBA3-202ENST00000361055 ITGAVP06756 1048 aa13.03□□□□□ -0.32
UBA3-202ENST00000361055 KRT10P13645 584 aa13.03□□□□□ -0.32
UBA3-202ENST00000361055 IBSPP21815 317 aaPredicted RBP13.03□□□□□ -0.32
UBA3-202ENST00000361055 ALDH3A1P30838 453 aa13.03□□□□□ -0.32
UBA3-202ENST00000361055 CCNG1P51959 295 aa13.03□□□□□ -0.32
UBA3-202ENST00000361055 ZNF132P52740 706 aa13.03□□□□□ -0.32
UBA3-202ENST00000361055 TAP1Q03518 808 aa13.03□□□□□ -0.32
UBA3-202ENST00000361055 PDK4Q16654 411 aa13.03□□□□□ -0.32
UBA3-202ENST00000361055 ATP13A4Q4VNC1 1196 aa13.03□□□□□ -0.32
UBA3-202ENST00000361055 ZNF484Q5JVG2 852 aa13.03□□□□□ -0.32
UBA3-202ENST00000361055 SPDYAQ5MJ70 313 aa13.03□□□□□ -0.32
UBA3-202ENST00000361055 MFSD7Q6UXD7 560 aa13.03□□□□□ -0.32
UBA3-202ENST00000361055 SPOCD1Q6ZMY3 1216 aa13.03□□□□□ -0.32
UBA3-202ENST00000361055 KIF2BQ8N4N8 673 aa13.03□□□□□ -0.32
UBA3-202ENST00000361055 ANKLE1Q8NAG6 615 aa13.03□□□□□ -0.32
UBA3-202ENST00000361055 MIEF2Q96C03 454 aa13.03□□□□□ -0.32
UBA3-202ENST00000361055 TMEM237Q96Q45 408 aa13.03□□□□□ -0.32
UBA3-202ENST00000361055 SMC6Q96SB8 1091 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms