RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 TDRD12Q587J7 1177 aaKnown RBP16.16■□□□□ 0.18
TPM1-206ENST00000358278 E4F1Q66K89 784 aaPredicted RBP16.16■□□□□ 0.18
TPM1-206ENST00000358278 LILRA6Q6PI73 481 aa16.16■□□□□ 0.18
TPM1-206ENST00000358278 CCDC149Q6ZUS6 474 aa16.16■□□□□ 0.18
TPM1-206ENST00000358278 TTC9BQ8N6N2 239 aa16.16■□□□□ 0.18
TPM1-206ENST00000358278 OR8K1Q8NGG5 319 aa16.16■□□□□ 0.18
TPM1-206ENST00000358278 SYN2Q92777 582 aaPredicted RBP16.16■□□□□ 0.18
TPM1-206ENST00000358278 GUCD1Q96NT3 240 aa16.16■□□□□ 0.18
TPM1-206ENST00000358278 PDCL3Q9H2J4 239 aa16.16■□□□□ 0.18
TPM1-206ENST00000358278 IMPACTQ9P2X3 320 aa16.16■□□□□ 0.18
TPM1-206ENST00000358278 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.16■□□□□ 0.18
TPM1-206ENST00000358278 SLC27A5Q9Y2P5 690 aa16.16■□□□□ 0.18
TPM1-206ENST00000358278 SEC24AO95486 1093 aa16.15■□□□□ 0.18
TPM1-206ENST00000358278 SRGAP2BP0DMP2 458 aa16.15■□□□□ 0.18
TPM1-206ENST00000358278 GRIK1P39086 918 aa16.15■□□□□ 0.18
TPM1-206ENST00000358278 MAGEA11P43364 429 aa16.15■□□□□ 0.18
TPM1-206ENST00000358278 TUFMP49411 452 aaKnown RBP16.15■□□□□ 0.18
TPM1-206ENST00000358278 KLHL30Q0D2K2 578 aa16.15■□□□□ 0.18
TPM1-206ENST00000358278 CNGA2Q16280 664 aa16.15■□□□□ 0.18
TPM1-206ENST00000358278 TAF3Q5VWG9 929 aa16.15■□□□□ 0.18
TPM1-206ENST00000358278 LCLAT1Q6UWP7 414 aa16.15■□□□□ 0.18
TPM1-206ENST00000358278 VSTM1Q6UX27 236 aa16.15■□□□□ 0.18
TPM1-206ENST00000358278 NOP9Q86U38 636 aaKnown RBP16.15■□□□□ 0.18
TPM1-206ENST00000358278 SCN4BQ8IWT1 228 aa16.15■□□□□ 0.18
TPM1-206ENST00000358278 TCEAL8Q8IYN2 117 aa16.15■□□□□ 0.18
TPM1-206ENST00000358278 SLC7A14Q8TBB6 771 aa16.15■□□□□ 0.18
TPM1-206ENST00000358278 SLC22A17Q8WUG5 538 aa16.15■□□□□ 0.18
TPM1-206ENST00000358278 DNAJC7Q99615 494 aa16.15■□□□□ 0.18
TPM1-206ENST00000358278 ZSWIM1Q9BR11 485 aa16.15■□□□□ 0.18
TPM1-206ENST00000358278 CRISPLD1Q9H336 500 aa16.15■□□□□ 0.18
TPM1-206ENST00000358278 PLEKHA4Q9H4M7 779 aa16.15■□□□□ 0.18
TPM1-206ENST00000358278 ABHD10Q9NUJ1 306 aa16.15■□□□□ 0.18
TPM1-206ENST00000358278 ZNHIT6Q9NWK9 470 aaKnown RBP16.15■□□□□ 0.18
TPM1-206ENST00000358278 HSFX1Q9UBD0 423 aa16.15■□□□□ 0.18
TPM1-206ENST00000358278 DENND4CQ5VZ89 1909 aa16.15■□□□□ 0.18
TPM1-206ENST00000358278 SOAT2O75908 522 aa16.14■□□□□ 0.17
TPM1-206ENST00000358278 MICAL2O94851 1124 aa16.14■□□□□ 0.17
TPM1-206ENST00000358278 C8AP07357 584 aa16.14■□□□□ 0.17
TPM1-206ENST00000358278 HAPLN1P10915 354 aaPredicted RBP16.14■□□□□ 0.17
TPM1-206ENST00000358278 NPR3P17342 541 aa16.14■□□□□ 0.17
TPM1-206ENST00000358278 ANXA13P27216 316 aa16.14■□□□□ 0.17
TPM1-206ENST00000358278 BCAT1P54687 386 aa16.14■□□□□ 0.17
TPM1-206ENST00000358278 PAQR9Q6ZVX9 377 aa16.14■□□□□ 0.17
TPM1-206ENST00000358278 IRF2BP2Q7Z5L9 587 aa16.14■□□□□ 0.17
TPM1-206ENST00000358278 ZNF677Q86XU0 584 aa16.14■□□□□ 0.17
TPM1-206ENST00000358278 EFHBQ8N7U6 833 aa16.14■□□□□ 0.17
TPM1-206ENST00000358278 SLC20A1Q8WUM9 679 aa16.14■□□□□ 0.17
TPM1-206ENST00000358278 CASP10Q92851 521 aa16.14■□□□□ 0.17
TPM1-206ENST00000358278 DMAP1Q9NPF5 467 aaPredicted RBP16.14■□□□□ 0.17
TPM1-206ENST00000358278 MTMR10Q9NXD2 777 aa16.14■□□□□ 0.17
TPM1-206ENST00000358278 NOCTQ9UK39 431 aaKnown RBP16.14■□□□□ 0.17
TPM1-206ENST00000358278 YIPF1Q9Y548 306 aa16.14■□□□□ 0.17
TPM1-206ENST00000358278 CEP83Q9Y592 693 aa16.14■□□□□ 0.17
TPM1-206ENST00000358278 INSL5Q9Y5Q6 135 aa16.14■□□□□ 0.17
TPM1-206ENST00000358278 OBSL1O75147 1896 aa16.14■□□□□ 0.17
TPM1-206ENST00000358278 TRIM66O15016 1216 aa16.14■□□□□ 0.17
TPM1-206ENST00000358278 LRG1P02750 347 aa16.14■□□□□ 0.17
TPM1-206ENST00000358278 ALDH1A3P47895 512 aa16.14■□□□□ 0.17
TPM1-206ENST00000358278 MAP3K7CLP57077 242 aa16.14■□□□□ 0.17
TPM1-206ENST00000358278 RBM10P98175 930 aaKnown RBP16.14■□□□□ 0.17
TPM1-206ENST00000358278 CDR2Q01850 454 aa16.14■□□□□ 0.17
TPM1-206ENST00000358278 BST2Q10589 180 aaKnown RBP16.14■□□□□ 0.17
TPM1-206ENST00000358278 CLEC20AQ6ZU45 233 aa16.14■□□□□ 0.17
TPM1-206ENST00000358278 TTC30AQ86WT1 665 aa16.14■□□□□ 0.17
TPM1-206ENST00000358278 PASD1Q8IV76 773 aa16.14■□□□□ 0.17
TPM1-206ENST00000358278 TC2NQ8N9U0 490 aa16.14■□□□□ 0.17
TPM1-206ENST00000358278 ANKRD52Q8NB46 1076 aa16.14■□□□□ 0.17
TPM1-206ENST00000358278 UBA3Q8TBC4 463 aa16.14■□□□□ 0.17
TPM1-206ENST00000358278 DUSP16Q9BY84 665 aa16.14■□□□□ 0.17
TPM1-206ENST00000358278 HAUS4Q9H6D7 363 aa16.14■□□□□ 0.17
TPM1-206ENST00000358278 SEPT11Q9NVA2 429 aaKnown RBP16.14■□□□□ 0.17
TPM1-206ENST00000358278 COL6A3P12111 3177 aa16.13■□□□□ 0.17
TPM1-206ENST00000358278 F8VP50 259 aa16.13■□□□□ 0.17
TPM1-206ENST00000358278 SERPING1P05155 500 aa16.13■□□□□ 0.17
TPM1-206ENST00000358278 MMEP08473 750 aa16.13■□□□□ 0.17
TPM1-206ENST00000358278 SKILP12757 684 aa16.13■□□□□ 0.17
TPM1-206ENST00000358278 PRKCIP41743 596 aa16.13■□□□□ 0.17
TPM1-206ENST00000358278 CACNA2D1P54289 1103 aa16.13■□□□□ 0.17
TPM1-206ENST00000358278 RPL10AP62906 217 aaKnown RBP16.13■□□□□ 0.17
TPM1-206ENST00000358278 PLD1Q13393 1074 aa16.13■□□□□ 0.17
TPM1-206ENST00000358278 PPM1LQ5SGD2 360 aa16.13■□□□□ 0.17
TPM1-206ENST00000358278 EP400NLQ6ZTU2 488 aa16.13■□□□□ 0.17
TPM1-206ENST00000358278 VN1R2Q8NFZ6 395 aa16.13■□□□□ 0.17
TPM1-206ENST00000358278 HDAC7Q8WUI4 952 aa16.13■□□□□ 0.17
TPM1-206ENST00000358278 DDX1Q92499 740 aaKnown RBP16.13■□□□□ 0.17
TPM1-206ENST00000358278 PCDHGC3Q9UN70 934 aa16.13■□□□□ 0.17
TPM1-206ENST00000358278 BZW2Q9Y6E2 419 aaKnown RBP16.13■□□□□ 0.17
TPM1-206ENST00000358278 LINC01565O15544 149 aa16.12■□□□□ 0.17
TPM1-206ENST00000358278 NCK2O43639 380 aa16.12■□□□□ 0.17
TPM1-206ENST00000358278 CFHP08603 1231 aa16.12■□□□□ 0.17
TPM1-206ENST00000358278 SETSIPP0DME0 302 aa16.12■□□□□ 0.17
TPM1-206ENST00000358278 HNRNPH3P31942 346 aaKnown RBP16.12■□□□□ 0.17
TPM1-206ENST00000358278 TWF1Q12792 350 aa16.12■□□□□ 0.17
TPM1-206ENST00000358278 ARID5BQ14865 1188 aa16.12■□□□□ 0.17
TPM1-206ENST00000358278 MEA1Q16626 185 aa16.12■□□□□ 0.17
TPM1-206ENST00000358278 DDR2Q16832 855 aa16.12■□□□□ 0.17
TPM1-206ENST00000358278 RTL10Q7L3V2 364 aa16.12■□□□□ 0.17
TPM1-206ENST00000358278 SECISBP2LQ93073 1101 aaKnown RBP16.12■□□□□ 0.17
TPM1-206ENST00000358278 KCNK16Q96T55 309 aa16.12■□□□□ 0.17
TPM1-206ENST00000358278 SMOQ99835 787 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms