RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 TSC2P49815 1807 aa17.05■□□□□ 0.32
IFT20-202ENST00000357896 PCNX2A6NKB5 2137 aa17.05■□□□□ 0.32
IFT20-202ENST00000357896 MYMKA6NI61 221 aa17.05■□□□□ 0.32
IFT20-202ENST00000357896 OPHN1O60890 802 aa17.05■□□□□ 0.32
IFT20-202ENST00000357896 TADA3O75528 432 aa17.05■□□□□ 0.32
IFT20-202ENST00000357896 SEC24BO95487 1268 aa17.05■□□□□ 0.32
IFT20-202ENST00000357896 CFIP05156 583 aa17.05■□□□□ 0.32
IFT20-202ENST00000357896 HDCP19113 662 aa17.05■□□□□ 0.32
IFT20-202ENST00000357896 ABCD1P33897 745 aa17.05■□□□□ 0.32
IFT20-202ENST00000357896 OPRD1P41143 372 aa17.05■□□□□ 0.32
IFT20-202ENST00000357896 GPR15P49685 360 aa17.05■□□□□ 0.32
IFT20-202ENST00000357896 SLC12A3P55017 1021 aa17.05■□□□□ 0.32
IFT20-202ENST00000357896 DDR2Q16832 855 aa17.05■□□□□ 0.32
IFT20-202ENST00000357896 DUOXA1Q1HG43 343 aa17.05■□□□□ 0.32
IFT20-202ENST00000357896 SOWAHCQ53LP3 525 aaPredicted RBP17.05■□□□□ 0.32
IFT20-202ENST00000357896 HYIQ5T013 277 aa17.05■□□□□ 0.32
IFT20-202ENST00000357896 SDHAF4Q5VUM1 108 aa17.05■□□□□ 0.32
IFT20-202ENST00000357896 PEAR1Q5VY43 1037 aaPredicted RBP17.05■□□□□ 0.32
IFT20-202ENST00000357896 TMEM92Q6UXU6 159 aa17.05■□□□□ 0.32
IFT20-202ENST00000357896 RABEPKQ7Z6M1 372 aa17.05■□□□□ 0.32
IFT20-202ENST00000357896 RAB44Q7Z6P3 723 aaPredicted RBP17.05■□□□□ 0.32
IFT20-202ENST00000357896 ACBD6Q9BR61 282 aa17.05■□□□□ 0.32
IFT20-202ENST00000357896 GTPBP2Q9BX10 602 aaKnown RBP17.05■□□□□ 0.32
IFT20-202ENST00000357896 TMLHEQ9NVH6 421 aa17.05■□□□□ 0.32
IFT20-202ENST00000357896 ODF2LQ9ULJ1 636 aa17.05■□□□□ 0.32
IFT20-202ENST00000357896 ARHGAP26Q9UNA1 814 aa17.05■□□□□ 0.32
IFT20-202ENST00000357896 AP5Z1O43299 807 aa17.04■□□□□ 0.32
IFT20-202ENST00000357896 PLA2G4BP0C869 781 aa17.04■□□□□ 0.32
IFT20-202ENST00000357896 PFKLP17858 780 aa17.04■□□□□ 0.32
IFT20-202ENST00000357896 CYP2F1P24903 491 aa17.04■□□□□ 0.32
IFT20-202ENST00000357896 PNPLA4P41247 253 aa17.04■□□□□ 0.32
IFT20-202ENST00000357896 POU5F1Q01860 360 aaKnown RBP17.04■□□□□ 0.32
IFT20-202ENST00000357896 IL17AQ16552 155 aa17.04■□□□□ 0.32
IFT20-202ENST00000357896 EOGTQ5NDL2 527 aa17.04■□□□□ 0.32
IFT20-202ENST00000357896 PDZD3Q86UT5 571 aa17.04■□□□□ 0.32
IFT20-202ENST00000357896 ALLCQ8N6M5 410 aa17.04■□□□□ 0.32
IFT20-202ENST00000357896 KIAA1958Q8N8K9 716 aa17.04■□□□□ 0.32
IFT20-202ENST00000357896 ARL14EPQ8N8R7 260 aaPredicted RBP17.04■□□□□ 0.32
IFT20-202ENST00000357896 TXNDC5Q8NBS9 432 aaKnown RBP17.04■□□□□ 0.32
IFT20-202ENST00000357896 STKLD1Q8NE28 680 aa17.04■□□□□ 0.32
IFT20-202ENST00000357896 COL26A1Q96A83 441 aa17.04■□□□□ 0.32
IFT20-202ENST00000357896 CDK5RAP3Q96JB5 506 aa17.04■□□□□ 0.32
IFT20-202ENST00000357896 ZNF560Q96MR9 790 aa17.04■□□□□ 0.32
IFT20-202ENST00000357896 LLPHQ9BRT6 129 aaKnown RBP17.04■□□□□ 0.32
IFT20-202ENST00000357896 GCNT4Q9P109 453 aa17.04■□□□□ 0.32
IFT20-202ENST00000357896 MBD1Q9UIS9 605 aaPredicted RBP17.04■□□□□ 0.32
IFT20-202ENST00000357896 PCDHB6Q9Y5E3 794 aa17.04■□□□□ 0.32
IFT20-202ENST00000357896 KIAA1549LQ6ZVL6 1849 aa17.03■□□□□ 0.32
IFT20-202ENST00000357896 SERPINF2P08697 491 aa17.03■□□□□ 0.32
IFT20-202ENST00000357896 ITPKAP23677 461 aa17.03■□□□□ 0.32
IFT20-202ENST00000357896 ACOT2P49753 483 aa17.03■□□□□ 0.32
IFT20-202ENST00000357896 TOB1P50616 345 aaPredicted RBP17.03■□□□□ 0.32
IFT20-202ENST00000357896 NEK4P51957 841 aa17.03■□□□□ 0.32
IFT20-202ENST00000357896 SCAPQ12770 1279 aa17.03■□□□□ 0.32
IFT20-202ENST00000357896 MAP7D1Q3KQU3 841 aa17.03■□□□□ 0.32
IFT20-202ENST00000357896 SLFN12LQ6IEE8 588 aa17.03■□□□□ 0.32
IFT20-202ENST00000357896 C19orf48Q6RUI8 117 aa17.03■□□□□ 0.32
IFT20-202ENST00000357896 NT5DC4Q86YG4 428 aa17.03■□□□□ 0.32
IFT20-202ENST00000357896 PGBD3Q8N328 593 aa17.03■□□□□ 0.32
IFT20-202ENST00000357896 MYCT1Q8N699 235 aa17.03■□□□□ 0.32
IFT20-202ENST00000357896 IL17RCQ8NAC3 791 aa17.03■□□□□ 0.32
IFT20-202ENST00000357896 SPATA18Q8TC71 538 aa17.03■□□□□ 0.32
IFT20-202ENST00000357896 LRRC15Q8TF66 581 aa17.03■□□□□ 0.32
IFT20-202ENST00000357896 PNKPQ96T60 521 aa17.03■□□□□ 0.32
IFT20-202ENST00000357896 SMG1Q96Q15 3661 aaKnown RBP17.03■□□□□ 0.32
IFT20-202ENST00000357896 LOC400499M0QZD8 3231 aa17.03■□□□□ 0.32
IFT20-202ENST00000357896 SETXQ7Z333 2677 aaKnown RBP17.02■□□□□ 0.32
IFT20-202ENST00000357896 MYO16Q9Y6X6 1858 aa17.02■□□□□ 0.32
IFT20-202ENST00000357896 NPHP3-ACAD11A0A0J9YXS1 232 aa17.02■□□□□ 0.32
IFT20-202ENST00000357896 C2orf78A6NCI8 922 aa17.02■□□□□ 0.32
IFT20-202ENST00000357896 K7ENM7 598 aa17.02■□□□□ 0.32
IFT20-202ENST00000357896 SLC9A3R1O14745 358 aaPredicted RBP17.02■□□□□ 0.32
IFT20-202ENST00000357896 KLF8O95600 359 aaPredicted RBP17.02■□□□□ 0.32
IFT20-202ENST00000357896 EIF2DP41214 584 aaKnown RBP17.02■□□□□ 0.32
IFT20-202ENST00000357896 MYL7Q01449 175 aa17.02■□□□□ 0.32
IFT20-202ENST00000357896 SLC14A1Q13336 389 aa17.02■□□□□ 0.32
IFT20-202ENST00000357896 CFAP221Q4G0U5 840 aa17.02■□□□□ 0.32
IFT20-202ENST00000357896 ARSHQ5FYA8 562 aa17.02■□□□□ 0.32
IFT20-202ENST00000357896 ADALQ6DHV7 355 aa17.02■□□□□ 0.32
IFT20-202ENST00000357896 TMEM86AQ8N2M4 240 aa17.02■□□□□ 0.32
IFT20-202ENST00000357896 FRMD1Q8N878 549 aa17.02■□□□□ 0.32
IFT20-202ENST00000357896 HMGB4Q8WW32 186 aa17.02■□□□□ 0.32
IFT20-202ENST00000357896 PNMA5Q96PV4 448 aa17.02■□□□□ 0.32
IFT20-202ENST00000357896 PARVGQ9HBI0 331 aa17.02■□□□□ 0.32
IFT20-202ENST00000357896 DDX43Q9NXZ2 648 aaKnown RBP17.02■□□□□ 0.32
IFT20-202ENST00000357896 CACNA1EQ15878 2313 aa17.02■□□□□ 0.31
IFT20-202ENST00000357896 ADAMTS20P59510 1910 aa17.02■□□□□ 0.31
IFT20-202ENST00000357896 OBSL1O75147 1896 aa17.01■□□□□ 0.31
IFT20-202ENST00000357896 ATXN2Q99700 1313 aaKnown RBP17.01■□□□□ 0.31
IFT20-202ENST00000357896 A0A0A0MRY4 1105 aa17.01■□□□□ 0.31
IFT20-202ENST00000357896 SGK1O00141 431 aa17.01■□□□□ 0.31
IFT20-202ENST00000357896 ARHGAP33O14559 1287 aa17.01■□□□□ 0.31
IFT20-202ENST00000357896 TRAK2O60296 914 aa17.01■□□□□ 0.31
IFT20-202ENST00000357896 HUS1O60921 280 aa17.01■□□□□ 0.31
IFT20-202ENST00000357896 KAT7O95251 611 aa17.01■□□□□ 0.31
IFT20-202ENST00000357896 APODP05090 189 aa17.01■□□□□ 0.31
IFT20-202ENST00000357896 SYPP08247 313 aa17.01■□□□□ 0.31
IFT20-202ENST00000357896 HNRNPLP14866 589 aaKnown RBP eCLIP17.01■□□□□ 0.31
IFT20-202ENST00000357896 TIE1P35590 1138 aa17.01■□□□□ 0.31
IFT20-202ENST00000357896 TNFRSF4P43489 277 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms