RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 SCFD2Q8WU76 684 aa16.21■□□□□ 0.19
TRAPPC11-202ENST00000357207 HPDLQ96IR7 371 aa16.21■□□□□ 0.19
TRAPPC11-202ENST00000357207 RHBDL2Q9NX52 303 aa16.21■□□□□ 0.19
TRAPPC11-202ENST00000357207 OGTO15294 1046 aa16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 TPST1O60507 370 aa16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 ZNF235Q14590 738 aa16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 LBRQ14739 615 aaKnown RBP16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 CCDC92Q53HC0 331 aaPredicted RBP16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 DCAF6Q58WW2 860 aa16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 WLSQ5T9L3 541 aa16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 ZNF75CPQ92670 426 aaPredicted RBP16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 PRCCQ92733 491 aaPredicted RBP16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 RMDN1Q96DB5 314 aa16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 SGF29Q96ES7 293 aa16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 MYLK2Q9H1R3 596 aa16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 RNPEPL1Q9HAU8 725 aa16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 ZNF70Q9UC06 446 aaPredicted RBP16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 TRPC5OSA6NMA1 111 aa16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 SSTR1P30872 391 aa16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 ACADSBP45954 432 aa16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 C1QBPQ07021 282 aaKnown RBP16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 CYP24A1Q07973 514 aa16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 AUHQ13825 339 aaKnown RBP16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 SLC44A4Q53GD3 710 aa16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 IYDQ6PHW0 289 aa16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 ABRAQ8N0Z2 381 aa16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 OR9Q1Q8NGQ5 310 aa16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 MTMR9Q96QG7 549 aa16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 KLHL4Q9C0H6 718 aa16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 SMARCAD1Q9H4L7 1026 aa16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 SAR1AQ9NR31 198 aa16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 PRMT7Q9NVM4 692 aaPredicted RBP16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 SLC13A4Q9UKG4 626 aa16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 PXDNQ92626 1479 aa16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 SDR42E2A6NKP2 422 aa16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 TLR2O60603 784 aa16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 DAB1O75553 588 aa16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 SHBGP04278 402 aa16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 RALBP11234 206 aa16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 DRG2P55039 364 aaKnown RBP16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 LRRC71Q8N4P6 559 aa16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 APPL2Q8NEU8 664 aa16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 ACER1Q8TDN7 264 aa16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 TFB1MQ8WVM0 346 aaKnown RBP16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 SLC10A4Q96EP9 437 aa16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 NEURL4Q96JN8 1562 aa16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 TULP2O00295 520 aa16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 TMED10P49755 219 aaKnown RBP16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 MTFR1Q15390 333 aa16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 AASDHQ4L235 1098 aaPredicted RBP16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 NAPEPLDQ6IQ20 393 aa16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 LRRC8BQ6P9F7 803 aa16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 ARHGEF19Q8IW93 802 aa16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 CALML6Q8TD86 181 aa16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 PPP2R3CQ969Q6 453 aa16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 GPRASP2Q96D09 838 aa16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 DDX28Q9NUL7 540 aaKnown RBP16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 LRFN2Q9ULH4 789 aa16.2■□□□□ 0.18
TRAPPC11-202ENST00000357207 KIDINS220Q9ULH0 1771 aa16.19■□□□□ 0.18
TRAPPC11-202ENST00000357207 ESRRBO95718 433 aa16.19■□□□□ 0.18
TRAPPC11-202ENST00000357207 PSMC3P17980 439 aa16.19■□□□□ 0.18
TRAPPC11-202ENST00000357207 DRD4P21917 467 aa16.19■□□□□ 0.18
TRAPPC11-202ENST00000357207 TGM2P21980 687 aa16.19■□□□□ 0.18
TRAPPC11-202ENST00000357207 SERPINB5P36952 375 aa16.19■□□□□ 0.18
TRAPPC11-202ENST00000357207 RRP1BQ14684 758 aaKnown RBP16.19■□□□□ 0.18
TRAPPC11-202ENST00000357207 RBBP7Q16576 425 aa16.19■□□□□ 0.18
TRAPPC11-202ENST00000357207 BNC2Q6ZN30 1099 aaPredicted RBP16.19■□□□□ 0.18
TRAPPC11-202ENST00000357207 IRF2BP1Q8IU81 584 aa16.19■□□□□ 0.18
TRAPPC11-202ENST00000357207 CYP2W1Q8TAV3 490 aa16.19■□□□□ 0.18
TRAPPC11-202ENST00000357207 INPP5DQ92835 1189 aa16.19■□□□□ 0.18
TRAPPC11-202ENST00000357207 MIEF2Q96C03 454 aa16.19■□□□□ 0.18
TRAPPC11-202ENST00000357207 NMD3Q96D46 503 aaKnown RBP16.19■□□□□ 0.18
TRAPPC11-202ENST00000357207 IL1RL2Q9HB29 575 aa16.19■□□□□ 0.18
TRAPPC11-202ENST00000357207 CHST7Q9NS84 486 aa16.19■□□□□ 0.18
TRAPPC11-202ENST00000357207 MEGF6O75095 1541 aa16.19■□□□□ 0.18
TRAPPC11-202ENST00000357207 STRNO43815 780 aa16.19■□□□□ 0.18
TRAPPC11-202ENST00000357207 SOX11P35716 441 aa16.19■□□□□ 0.18
TRAPPC11-202ENST00000357207 BMPR2Q13873 1038 aa16.19■□□□□ 0.18
TRAPPC11-202ENST00000357207 IRGCQ6NXR0 463 aa16.19■□□□□ 0.18
TRAPPC11-202ENST00000357207 ATPAF2Q8N5M1 289 aa16.19■□□□□ 0.18
TRAPPC11-202ENST00000357207 GMCL1Q96IK5 515 aa16.19■□□□□ 0.18
TRAPPC11-202ENST00000357207 PIM2Q9P1W9 311 aa16.19■□□□□ 0.18
TRAPPC11-202ENST00000357207 CLTCQ00610 1675 aaKnown RBP16.19■□□□□ 0.18
TRAPPC11-202ENST00000357207 DIP2BQ9P265 1576 aa16.19■□□□□ 0.18
TRAPPC11-202ENST00000357207 TMEM247A6NEH6 219 aa16.19■□□□□ 0.18
TRAPPC11-202ENST00000357207 PDAP1Q13442 181 aaKnown RBP16.19■□□□□ 0.18
TRAPPC11-202ENST00000357207 PDK2Q15119 407 aa16.19■□□□□ 0.18
TRAPPC11-202ENST00000357207 KIAA2013Q8IYS2 634 aa16.19■□□□□ 0.18
TRAPPC11-202ENST00000357207 BEGAINQ9BUH8 593 aa16.19■□□□□ 0.18
TRAPPC11-202ENST00000357207 SOX13Q9UN79 622 aa16.19■□□□□ 0.18
TRAPPC11-202ENST00000357207 M0R3G1 203 aa16.18■□□□□ 0.18
TRAPPC11-202ENST00000357207 ICAM1P05362 532 aa16.18■□□□□ 0.18
TRAPPC11-202ENST00000357207 HMOX2P30519 316 aa16.18■□□□□ 0.18
TRAPPC11-202ENST00000357207 ELK3P41970 407 aa16.18■□□□□ 0.18
TRAPPC11-202ENST00000357207 LRRC74BQ6ZQY2 392 aa16.18■□□□□ 0.18
TRAPPC11-202ENST00000357207 ZNF786Q8N393 782 aa16.18■□□□□ 0.18
TRAPPC11-202ENST00000357207 VGLL2Q8N8G2 317 aa16.18■□□□□ 0.18
TRAPPC11-202ENST00000357207 WNK4Q96J92 1243 aa16.18■□□□□ 0.18
TRAPPC11-202ENST00000357207 PRPF18Q99633 342 aaKnown RBP16.18■□□□□ 0.18
TRAPPC11-202ENST00000357207 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms