RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 UBE3AQ05086 875 aa18.72■□□□□ 0.59
COL18A1-202ENST00000355480 CHI3L2Q15782 390 aa18.72■□□□□ 0.59
COL18A1-202ENST00000355480 ZNF473Q8WTR7 871 aaKnown RBP18.72■□□□□ 0.59
COL18A1-202ENST00000355480 INPP5DQ92835 1189 aa18.72■□□□□ 0.59
COL18A1-202ENST00000355480 ARP10275 920 aa18.72■□□□□ 0.59
COL18A1-202ENST00000355480 VDRP11473 427 aa18.72■□□□□ 0.59
COL18A1-202ENST00000355480 CTCFP49711 727 aaPredicted RBP18.72■□□□□ 0.59
COL18A1-202ENST00000355480 LAYNQ6UX15 382 aa18.72■□□□□ 0.59
COL18A1-202ENST00000355480 CLEC17AQ6ZS10 378 aa18.72■□□□□ 0.59
COL18A1-202ENST00000355480 ARRDC4Q8NCT1 418 aa18.72■□□□□ 0.59
COL18A1-202ENST00000355480 E2F7Q96AV8 911 aa18.72■□□□□ 0.59
COL18A1-202ENST00000355480 CYFIP2Q96F07 1278 aa18.72■□□□□ 0.59
COL18A1-202ENST00000355480 ROPN1BQ9BZX4 212 aaPredicted RBP18.72■□□□□ 0.59
COL18A1-202ENST00000355480 ROPN1Q9HAT0 212 aaPredicted RBP18.72■□□□□ 0.59
COL18A1-202ENST00000355480 LRRIQ3A6PVS8 624 aaPredicted RBP18.72■□□□□ 0.59
COL18A1-202ENST00000355480 MED24O75448 989 aa18.72■□□□□ 0.59
COL18A1-202ENST00000355480 EPHX2P34913 555 aa18.72■□□□□ 0.59
COL18A1-202ENST00000355480 ATN1P54259 1190 aaPredicted RBP18.72■□□□□ 0.59
COL18A1-202ENST00000355480 SKOR1P84550 965 aa18.72■□□□□ 0.59
COL18A1-202ENST00000355480 BTKQ06187 659 aa18.72■□□□□ 0.59
COL18A1-202ENST00000355480 MRNIPQ6NTE8 343 aa18.72■□□□□ 0.59
COL18A1-202ENST00000355480 DDX42Q86XP3 938 aaKnown RBP eCLIP18.72■□□□□ 0.59
COL18A1-202ENST00000355480 THTPAQ9BU02 230 aa18.72■□□□□ 0.59
COL18A1-202ENST00000355480 C16orf96A6NNT2 1141 aa18.71■□□□□ 0.59
COL18A1-202ENST00000355480 SERPINB10P48595 397 aa18.71■□□□□ 0.59
COL18A1-202ENST00000355480 NFIAQ12857 509 aa18.71■□□□□ 0.59
COL18A1-202ENST00000355480 GRB10Q13322 594 aa18.71■□□□□ 0.59
COL18A1-202ENST00000355480 ERAP2Q6P179 960 aa18.71■□□□□ 0.59
COL18A1-202ENST00000355480 TRIM65Q6PJ69 517 aa18.71■□□□□ 0.59
COL18A1-202ENST00000355480 PCSK9Q8NBP7 692 aaKnown RBP18.71■□□□□ 0.59
COL18A1-202ENST00000355480 XPO6Q96QU8 1125 aaKnown RBP18.71■□□□□ 0.59
COL18A1-202ENST00000355480 CHST12Q9NRB3 414 aa18.71■□□□□ 0.59
COL18A1-202ENST00000355480 PNMA8BQ9ULN7 279 aaPredicted RBP18.71■□□□□ 0.59
COL18A1-202ENST00000355480 PXDNLA1KZ92 1463 aa18.71■□□□□ 0.59
COL18A1-202ENST00000355480 PPP1R3GB7ZBB8 358 aa18.71■□□□□ 0.59
COL18A1-202ENST00000355480 SGPL1O95470 568 aa18.71■□□□□ 0.59
COL18A1-202ENST00000355480 APOA1P02647 267 aa18.71■□□□□ 0.59
COL18A1-202ENST00000355480 CENPAP49450 140 aa18.71■□□□□ 0.59
COL18A1-202ENST00000355480 GEMIN4P57678 1058 aaKnown RBP18.71■□□□□ 0.59
COL18A1-202ENST00000355480 MFSD4BQ5TF39 518 aa18.71■□□□□ 0.59
COL18A1-202ENST00000355480 ERP27Q96DN0 273 aa18.71■□□□□ 0.59
COL18A1-202ENST00000355480 PDLIM2Q96JY6 352 aa18.71■□□□□ 0.59
COL18A1-202ENST00000355480 KCTD10Q9H3F6 313 aa18.71■□□□□ 0.59
COL18A1-202ENST00000355480 MTO1Q9Y2Z2 717 aaKnown RBP18.71■□□□□ 0.59
COL18A1-202ENST00000355480 NPM3O75607 178 aaKnown RBP18.71■□□□□ 0.59
COL18A1-202ENST00000355480 CTDNEP1O95476 244 aa18.71■□□□□ 0.59
COL18A1-202ENST00000355480 AGBL2Q5U5Z8 902 aa18.71■□□□□ 0.59
COL18A1-202ENST00000355480 HASPINQ8TF76 798 aa18.71■□□□□ 0.59
COL18A1-202ENST00000355480 STN1Q9H668 368 aaKnown RBP18.71■□□□□ 0.59
COL18A1-202ENST00000355480 IMPDH2P12268 514 aa18.71■□□□□ 0.59
COL18A1-202ENST00000355480 CCDC157Q569K6 752 aa18.71■□□□□ 0.59
COL18A1-202ENST00000355480 POTEAQ6S8J7 498 aa18.71■□□□□ 0.59
COL18A1-202ENST00000355480 FRMD8Q9BZ67 464 aaPredicted RBP18.71■□□□□ 0.59
COL18A1-202ENST00000355480 MANSC1Q9H8J5 431 aa18.71■□□□□ 0.59
COL18A1-202ENST00000355480 STIP1P31948 543 aaKnown RBP18.7■□□□□ 0.58
COL18A1-202ENST00000355480 TROAPQ12815 778 aa18.7■□□□□ 0.58
COL18A1-202ENST00000355480 DDX39BQ13838 428 aaKnown RBP18.7■□□□□ 0.58
COL18A1-202ENST00000355480 PAWRQ96IZ0 340 aaKnown RBP18.7■□□□□ 0.58
COL18A1-202ENST00000355480 ZDHHC15Q96MV8 337 aa18.7■□□□□ 0.58
COL18A1-202ENST00000355480 PNKPQ96T60 521 aa18.7■□□□□ 0.58
COL18A1-202ENST00000355480 PSTPIP1O43586 416 aa18.7■□□□□ 0.58
COL18A1-202ENST00000355480 AVPR1AP37288 418 aa18.7■□□□□ 0.58
COL18A1-202ENST00000355480 NPTX2P47972 431 aa18.7■□□□□ 0.58
COL18A1-202ENST00000355480 OXCT1P55809 520 aa18.7■□□□□ 0.58
COL18A1-202ENST00000355480 PLEKHM3Q6ZWE6 761 aa18.7■□□□□ 0.58
COL18A1-202ENST00000355480 VIPAS39Q9H9C1 493 aa18.7■□□□□ 0.58
COL18A1-202ENST00000355480 GBA2Q9HCG7 927 aaPredicted RBP18.7■□□□□ 0.58
COL18A1-202ENST00000355480 SCUBE2Q9NQ36 999 aa18.7■□□□□ 0.58
COL18A1-202ENST00000355480 TRPM5Q9NZQ8 1165 aa18.7■□□□□ 0.58
COL18A1-202ENST00000355480 CPA4Q9UI42 421 aa18.7■□□□□ 0.58
COL18A1-202ENST00000355480 HPS5Q9UPZ3 1129 aa18.7■□□□□ 0.58
COL18A1-202ENST00000355480 HNRNPRO43390 633 aaKnown RBP18.7■□□□□ 0.58
COL18A1-202ENST00000355480 ENDOD1O94919 500 aa18.7■□□□□ 0.58
COL18A1-202ENST00000355480 MAP3K6O95382 1288 aa18.7■□□□□ 0.58
COL18A1-202ENST00000355480 KRT8P05787 483 aa18.7■□□□□ 0.58
COL18A1-202ENST00000355480 CASP4P49662 377 aa18.7■□□□□ 0.58
COL18A1-202ENST00000355480 NEK2P51955 445 aa18.7■□□□□ 0.58
COL18A1-202ENST00000355480 RPL10AP62906 217 aaKnown RBP18.7■□□□□ 0.58
COL18A1-202ENST00000355480 DEPDC1Q5TB30 811 aa18.7■□□□□ 0.58
COL18A1-202ENST00000355480 BBS7Q8IWZ6 715 aa18.7■□□□□ 0.58
COL18A1-202ENST00000355480 RIBC1Q8N443 379 aaPredicted RBP18.7■□□□□ 0.58
COL18A1-202ENST00000355480 CCT8L2Q96SF2 557 aa18.7■□□□□ 0.58
COL18A1-202ENST00000355480 TAF6LQ9Y6J9 622 aa18.7■□□□□ 0.58
COL18A1-202ENST00000355480 GUCA1CO95843 209 aa18.7■□□□□ 0.58
COL18A1-202ENST00000355480 AASDHQ4L235 1098 aaPredicted RBP18.7■□□□□ 0.58
COL18A1-202ENST00000355480 ARMC2Q8NEN0 867 aa18.7■□□□□ 0.58
COL18A1-202ENST00000355480 ERGIC2Q96RQ1 377 aa18.7■□□□□ 0.58
COL18A1-202ENST00000355480 RBBP8Q99708 897 aa18.7■□□□□ 0.58
COL18A1-202ENST00000355480 KLC4Q9NSK0 619 aa18.7■□□□□ 0.58
COL18A1-202ENST00000355480 KIAA1257Q9ULG3 409 aa18.7■□□□□ 0.58
COL18A1-202ENST00000355480 V9GYQ6 96 aa18.7■□□□□ 0.58
COL18A1-202ENST00000355480 TRIM49D1C9J1S8 452 aa18.7■□□□□ 0.58
COL18A1-202ENST00000355480 F9P00740 461 aa18.7■□□□□ 0.58
COL18A1-202ENST00000355480 THP07101 528 aa18.7■□□□□ 0.58
COL18A1-202ENST00000355480 NUMBP49757 651 aa18.7■□□□□ 0.58
COL18A1-202ENST00000355480 SFSWAPQ12872 951 aaKnown RBP18.7■□□□□ 0.58
COL18A1-202ENST00000355480 AGGF1Q8N302 714 aaeCLIP18.7■□□□□ 0.583e-8■■■■■ 82
COL18A1-202ENST00000355480 JADE3Q92613 823 aa18.7■□□□□ 0.58
COL18A1-202ENST00000355480 AAR2Q9Y312 384 aaKnown RBP18.7■□□□□ 0.58
COL18A1-202ENST00000355480 RPS6KL1Q9Y6S9 549 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms