RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 DR1Q01658 176 aa18.13■□□□□ 0.49
VPS13B-201ENST00000355155 ORC1Q13415 861 aa18.13■□□□□ 0.49
VPS13B-201ENST00000355155 OR6B3Q8NGW1 331 aa18.13■□□□□ 0.49
VPS13B-201ENST00000355155 FAM71BQ8TC56 605 aa18.13■□□□□ 0.49
VPS13B-201ENST00000355155 ZFP42Q96MM3 310 aa18.13■□□□□ 0.49
VPS13B-201ENST00000355155 GAD1Q99259 594 aa18.13■□□□□ 0.49
VPS13B-201ENST00000355155 ERP44Q9BS26 406 aa18.13■□□□□ 0.49
VPS13B-201ENST00000355155 AMACRQ9UHK6 382 aa18.13■□□□□ 0.49
VPS13B-201ENST00000355155 HPCAL4Q9UM19 191 aa18.13■□□□□ 0.49
VPS13B-201ENST00000355155 MEIS3P2A8K0S8 358 aa18.13■□□□□ 0.49
VPS13B-201ENST00000355155 TMEM189-UBE2V1I3L0A0 370 aa18.13■□□□□ 0.49
VPS13B-201ENST00000355155 M0QZQ0 153 aa18.13■□□□□ 0.49
VPS13B-201ENST00000355155 GJB6O95452 261 aa18.13■□□□□ 0.49
VPS13B-201ENST00000355155 KRT7P08729 469 aa18.13■□□□□ 0.49
VPS13B-201ENST00000355155 GHRP10912 638 aa18.13■□□□□ 0.49
VPS13B-201ENST00000355155 CARSP49589 748 aaKnown RBP18.13■□□□□ 0.49
VPS13B-201ENST00000355155 PLCB3Q01970 1234 aa18.13■□□□□ 0.49
VPS13B-201ENST00000355155 CCNG2Q16589 344 aa18.13■□□□□ 0.49
VPS13B-201ENST00000355155 TTC27Q6P3X3 843 aa18.13■□□□□ 0.49
VPS13B-201ENST00000355155 C12orf29Q8N999 325 aa18.13■□□□□ 0.49
VPS13B-201ENST00000355155 CNPY3Q9BT09 278 aa18.13■□□□□ 0.49
VPS13B-201ENST00000355155 DPEP3Q9H4B8 488 aa18.13■□□□□ 0.49
VPS13B-201ENST00000355155 ELAC1Q9H777 363 aaKnown RBP18.13■□□□□ 0.49
VPS13B-201ENST00000355155 GOLGA2P5Q9HBQ8 144 aa18.13■□□□□ 0.49
VPS13B-201ENST00000355155 ASNSD1Q9NWL6 643 aa18.13■□□□□ 0.49
VPS13B-201ENST00000355155 HESX1Q9UBX0 185 aa18.13■□□□□ 0.49
VPS13B-201ENST00000355155 NEU2Q9Y3R4 380 aa18.13■□□□□ 0.49
VPS13B-201ENST00000355155 XPO1O14980 1071 aaKnown RBP18.13■□□□□ 0.49
VPS13B-201ENST00000355155 LRCH4O75427 683 aa18.13■□□□□ 0.49
VPS13B-201ENST00000355155 SLC6A3Q01959 620 aa18.13■□□□□ 0.49
VPS13B-201ENST00000355155 NFX1Q12986 1120 aaKnown RBP18.13■□□□□ 0.49
VPS13B-201ENST00000355155 PMF1Q6P1K2 205 aa18.13■□□□□ 0.49
VPS13B-201ENST00000355155 FAM183BPQ6ZVS7 135 aa18.13■□□□□ 0.49
VPS13B-201ENST00000355155 CMASQ8NFW8 434 aaPredicted RBP18.13■□□□□ 0.49
VPS13B-201ENST00000355155 RSPH1Q8WYR4 309 aa18.13■□□□□ 0.49
VPS13B-201ENST00000355155 FTHL17Q9BXU8 183 aa18.13■□□□□ 0.49
VPS13B-201ENST00000355155 DCLK3Q9C098 648 aa18.13■□□□□ 0.49
VPS13B-201ENST00000355155 METTL5Q9NRN9 209 aaKnown RBP18.13■□□□□ 0.49
VPS13B-201ENST00000355155 RASAL2Q9UJF2 1139 aa18.13■□□□□ 0.49
VPS13B-201ENST00000355155 TCRBV7S2A1N4TA0A589 114 aa18.12■□□□□ 0.49
VPS13B-201ENST00000355155 F8VP50 259 aa18.12■□□□□ 0.49
VPS13B-201ENST00000355155 CYB561D2O14569 222 aa18.12■□□□□ 0.49
VPS13B-201ENST00000355155 HSPA9P38646 679 aaKnown RBP18.12■□□□□ 0.49
VPS13B-201ENST00000355155 PHLDB2Q86SQ0 1253 aa18.12■□□□□ 0.49
VPS13B-201ENST00000355155 JAMLQ86YT9 394 aa18.12■□□□□ 0.49
VPS13B-201ENST00000355155 UBA3Q8TBC4 463 aa18.12■□□□□ 0.49
VPS13B-201ENST00000355155 ACBD3Q9H3P7 528 aa18.12■□□□□ 0.49
VPS13B-201ENST00000355155 UTP11Q9Y3A2 253 aaKnown RBP18.12■□□□□ 0.49
VPS13B-201ENST00000355155 PTCH2Q9Y6C5 1203 aa18.12■□□□□ 0.49
VPS13B-201ENST00000355155 TTI1O43156 1089 aa18.12■□□□□ 0.49
VPS13B-201ENST00000355155 ZMYND10O75800 440 aa18.12■□□□□ 0.49
VPS13B-201ENST00000355155 PSMA2P25787 234 aa18.12■□□□□ 0.49
VPS13B-201ENST00000355155 ARSEP51690 589 aa18.12■□□□□ 0.49
VPS13B-201ENST00000355155 MBTPS1Q14703 1052 aa18.12■□□□□ 0.49
VPS13B-201ENST00000355155 SLC26A9Q7LBE3 791 aa18.12■□□□□ 0.49
VPS13B-201ENST00000355155 B3GALNT2Q8NCR0 500 aa18.12■□□□□ 0.49
VPS13B-201ENST00000355155 CENPIQ92674 756 aaPredicted RBP18.12■□□□□ 0.49
VPS13B-201ENST00000355155 HERPUD2Q9BSE4 406 aa18.12■□□□□ 0.49
VPS13B-201ENST00000355155 TXLNGYQ9BZA5 131 aa18.12■□□□□ 0.49
VPS13B-201ENST00000355155 OSBPL8Q9BZF1 889 aa18.12■□□□□ 0.49
VPS13B-201ENST00000355155 STARD7Q9NQZ5 370 aa18.12■□□□□ 0.49
VPS13B-201ENST00000355155 OGDHLQ9ULD0 1010 aa18.12■□□□□ 0.49
VPS13B-201ENST00000355155 PTPRDP23468 1912 aa18.12■□□□□ 0.49
VPS13B-201ENST00000355155 NLRC5Q86WI3 1866 aa18.11■□□□□ 0.49
VPS13B-201ENST00000355155 E5RJQ4 531 aa18.11■□□□□ 0.49
VPS13B-201ENST00000355155 GPD1P21695 349 aa18.11■□□□□ 0.49
VPS13B-201ENST00000355155 LMO2P25791 158 aa18.11■□□□□ 0.49
VPS13B-201ENST00000355155 CETN2P41208 172 aa18.11■□□□□ 0.49
VPS13B-201ENST00000355155 PTPN9P43378 593 aa18.11■□□□□ 0.49
VPS13B-201ENST00000355155 ALS2CLQ60I27 953 aa18.11■□□□□ 0.49
VPS13B-201ENST00000355155 BNIPLQ7Z465 357 aa18.11■□□□□ 0.49
VPS13B-201ENST00000355155 MAGOHBQ96A72 148 aaKnown RBP18.11■□□□□ 0.49
VPS13B-201ENST00000355155 SENP8Q96LD8 212 aa18.11■□□□□ 0.49
VPS13B-201ENST00000355155 ADAM2Q99965 735 aa18.11■□□□□ 0.49
VPS13B-201ENST00000355155 PDE4CQ08493 712 aa18.11■□□□□ 0.49
VPS13B-201ENST00000355155 TUSC3Q13454 348 aa18.11■□□□□ 0.49
VPS13B-201ENST00000355155 HADHQ16836 314 aaKnown RBP18.11■□□□□ 0.49
VPS13B-201ENST00000355155 TRNP1Q6NT89 227 aa18.11■□□□□ 0.49
VPS13B-201ENST00000355155 CCDC137Q6PK04 289 aaKnown RBP18.11■□□□□ 0.49
VPS13B-201ENST00000355155 CYP4V2Q6ZWL3 525 aaPredicted RBP18.11■□□□□ 0.49
VPS13B-201ENST00000355155 RTN4RL1Q86UN2 441 aaPredicted RBP18.11■□□□□ 0.49
VPS13B-201ENST00000355155 FAM126BQ8IXS8 530 aa18.11■□□□□ 0.49
VPS13B-201ENST00000355155 SCML4Q8N228 414 aa18.11■□□□□ 0.49
VPS13B-201ENST00000355155 TEKT4Q8WW24 435 aa18.11■□□□□ 0.49
VPS13B-201ENST00000355155 DUSP16Q9BY84 665 aa18.11■□□□□ 0.49
VPS13B-201ENST00000355155 ZDHHC18Q9NUE0 388 aa18.11■□□□□ 0.49
VPS13B-201ENST00000355155 FEZ2Q9UHY8 353 aaPredicted RBP18.11■□□□□ 0.49
VPS13B-201ENST00000355155 DSEQ9UL01 958 aa18.11■□□□□ 0.49
VPS13B-201ENST00000355155 CDH9Q9ULB4 789 aa18.11■□□□□ 0.49
VPS13B-201ENST00000355155 hCG_1818297A0A087WSY0 165 aa18.1■□□□□ 0.49
VPS13B-201ENST00000355155 FAM170AA1A519 330 aa18.1■□□□□ 0.49
VPS13B-201ENST00000355155 CDKN2BP42772 138 aa18.1■□□□□ 0.49
VPS13B-201ENST00000355155 SPOCD1Q6ZMY3 1216 aa18.1■□□□□ 0.49
VPS13B-201ENST00000355155 PAQR9Q6ZVX9 377 aa18.1■□□□□ 0.49
VPS13B-201ENST00000355155 LINC01599Q8WXQ3 324 aa18.1■□□□□ 0.49
VPS13B-201ENST00000355155 PKMYT1Q99640 499 aa18.1■□□□□ 0.49
VPS13B-201ENST00000355155 ZSCAN5CA6NGD5 496 aaPredicted RBP18.1■□□□□ 0.49
VPS13B-201ENST00000355155 PITPNM1O00562 1244 aa18.1■□□□□ 0.49
VPS13B-201ENST00000355155 PAPSS1O43252 624 aaPredicted RBP18.1■□□□□ 0.49
VPS13B-201ENST00000355155 PTPN1P18031 435 aaKnown RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms