RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 AGPAT3Q9NRZ7 376 aa12.33□□□□□ -0.44
CDRT1-202ENST00000354433 TAB2Q9NYJ8 693 aa12.33□□□□□ -0.44
CDRT1-202ENST00000354433 HSFX1Q9UBD0 423 aa12.33□□□□□ -0.44
CDRT1-202ENST00000354433 PCDHB5Q9Y5E4 795 aa12.33□□□□□ -0.44
CDRT1-202ENST00000354433 ANK1P16157 1881 aa12.33□□□□□ -0.44
CDRT1-202ENST00000354433 PTPRJQ12913 1337 aa12.32□□□□□ -0.44
CDRT1-202ENST00000354433 HEPACAM2A8MVW5 462 aa12.32□□□□□ -0.44
CDRT1-202ENST00000354433 PDXKO00764 312 aa12.32□□□□□ -0.44
CDRT1-202ENST00000354433 ZNF263O14978 683 aa12.32□□□□□ -0.44
CDRT1-202ENST00000354433 FGF19O95750 216 aa12.32□□□□□ -0.44
CDRT1-202ENST00000354433 TPM1P09493 284 aa12.32□□□□□ -0.44
CDRT1-202ENST00000354433 ATF6P18850 670 aa12.32□□□□□ -0.44
CDRT1-202ENST00000354433 MARSP56192 900 aaKnown RBP12.32□□□□□ -0.44
CDRT1-202ENST00000354433 CYP4F8P98187 520 aa12.32□□□□□ -0.44
CDRT1-202ENST00000354433 ARID5BQ14865 1188 aa12.32□□□□□ -0.44
CDRT1-202ENST00000354433 SNRNP35Q16560 246 aaKnown RBP12.32□□□□□ -0.44
CDRT1-202ENST00000354433 NFE2Q16621 373 aaPredicted RBP12.32□□□□□ -0.44
CDRT1-202ENST00000354433 DUOXA2Q1HG44 320 aa12.32□□□□□ -0.44
CDRT1-202ENST00000354433 GPR158Q5T848 1215 aa12.32□□□□□ -0.44
CDRT1-202ENST00000354433 ZNF852Q6ZMS4 543 aa12.32□□□□□ -0.44
CDRT1-202ENST00000354433 LRRTM3Q86VH5 581 aa12.32□□□□□ -0.44
CDRT1-202ENST00000354433 WDR49Q8IV35 697 aa12.32□□□□□ -0.44
CDRT1-202ENST00000354433 TMEM86AQ8N2M4 240 aa12.32□□□□□ -0.44
CDRT1-202ENST00000354433 OR5B17Q8NGF7 314 aa12.32□□□□□ -0.44
CDRT1-202ENST00000354433 CCDC127Q96BQ5 260 aa12.32□□□□□ -0.44
CDRT1-202ENST00000354433 TUBGCP2Q9BSJ2 902 aa12.32□□□□□ -0.44
CDRT1-202ENST00000354433 PI4K2AQ9BTU6 479 aa12.32□□□□□ -0.44
CDRT1-202ENST00000354433 VPS16Q9H269 839 aa12.32□□□□□ -0.44
CDRT1-202ENST00000354433 ZNF334Q9HCZ1 680 aaPredicted RBP12.32□□□□□ -0.44
CDRT1-202ENST00000354433 LTB4R2Q9NPC1 389 aa12.32□□□□□ -0.44
CDRT1-202ENST00000354433 MAGED2Q9UNF1 606 aaPredicted RBP12.32□□□□□ -0.44
CDRT1-202ENST00000354433 TRAF3IP3Q9Y228 551 aa12.32□□□□□ -0.44
CDRT1-202ENST00000354433 MRPS17Q9Y2R5 130 aaKnown RBP12.32□□□□□ -0.44
CDRT1-202ENST00000354433 NOTCH4Q99466 2003 aa12.32□□□□□ -0.44
CDRT1-202ENST00000354433 USP34Q70CQ2 3546 aa12.32□□□□□ -0.44
CDRT1-202ENST00000354433 COL4A3Q01955 1670 aa12.32□□□□□ -0.44
CDRT1-202ENST00000354433 FAM170BA6NMN3 283 aa12.31□□□□□ -0.44
CDRT1-202ENST00000354433 CDC25CP30307 473 aa12.31□□□□□ -0.44
CDRT1-202ENST00000354433 HOXD13P35453 343 aa12.31□□□□□ -0.44
CDRT1-202ENST00000354433 NBL1P41271 181 aa12.31□□□□□ -0.44
CDRT1-202ENST00000354433 MTIF2P46199 727 aaKnown RBP12.31□□□□□ -0.44
CDRT1-202ENST00000354433 UBXN1Q04323 297 aa12.31□□□□□ -0.44
CDRT1-202ENST00000354433 NFIL3Q16649 462 aa12.31□□□□□ -0.44
CDRT1-202ENST00000354433 KNOP1Q1ED39 458 aaKnown RBP12.31□□□□□ -0.44
CDRT1-202ENST00000354433 INTS6LQ5JSJ4 861 aaKnown RBP12.31□□□□□ -0.44
CDRT1-202ENST00000354433 GPIHBP1Q8IV16 184 aa12.31□□□□□ -0.44
CDRT1-202ENST00000354433 CNGA4Q8IV77 575 aa12.31□□□□□ -0.44
CDRT1-202ENST00000354433 C1orf210Q8IVY1 113 aa12.31□□□□□ -0.44
CDRT1-202ENST00000354433 TOP6BLQ8N6T0 577 aa12.31□□□□□ -0.44
CDRT1-202ENST00000354433 TC2NQ8N9U0 490 aa12.31□□□□□ -0.44
CDRT1-202ENST00000354433 XXYLT1Q8NBI6 393 aa12.31□□□□□ -0.44
CDRT1-202ENST00000354433 CSGALNACT1Q8TDX6 532 aa12.31□□□□□ -0.44
CDRT1-202ENST00000354433 NKD2Q969F2 451 aaPredicted RBP12.31□□□□□ -0.44
CDRT1-202ENST00000354433 E2F7Q96AV8 911 aa12.31□□□□□ -0.44
CDRT1-202ENST00000354433 HPDLQ96IR7 371 aa12.31□□□□□ -0.44
CDRT1-202ENST00000354433 PANX2Q96RD6 677 aa12.31□□□□□ -0.44
CDRT1-202ENST00000354433 LRRC3Q9BY71 257 aa12.31□□□□□ -0.44
CDRT1-202ENST00000354433 SPATA6Q9NWH7 488 aaPredicted RBP12.31□□□□□ -0.44
CDRT1-202ENST00000354433 SIX4Q9UIU6 781 aa12.31□□□□□ -0.44
CDRT1-202ENST00000354433 NDRG2Q9UN36 371 aaKnown RBP12.31□□□□□ -0.44
CDRT1-202ENST00000354433 SCN1AP35498 2009 aa12.31□□□□□ -0.44
CDRT1-202ENST00000354433 AKR1B15C9JRZ8 316 aaPredicted RBP12.3□□□□□ -0.44
CDRT1-202ENST00000354433 NCAM2O15394 837 aa12.3□□□□□ -0.44
CDRT1-202ENST00000354433 TGFB1I1O43294 461 aa12.3□□□□□ -0.44
CDRT1-202ENST00000354433 CCP110O43303 1012 aa12.3□□□□□ -0.44
CDRT1-202ENST00000354433 CALUO43852 315 aaPredicted RBP12.3□□□□□ -0.44
CDRT1-202ENST00000354433 STX10O60499 249 aa12.3□□□□□ -0.44
CDRT1-202ENST00000354433 EXOC3O60645 756 aa12.3□□□□□ -0.44
CDRT1-202ENST00000354433 HAPLN1P10915 354 aaPredicted RBP12.3□□□□□ -0.44
CDRT1-202ENST00000354433 PRKCSHP14314 528 aaPredicted RBP12.3□□□□□ -0.44
CDRT1-202ENST00000354433 GLULP15104 373 aa12.3□□□□□ -0.44
CDRT1-202ENST00000354433 TARSP26639 723 aaKnown RBP12.3□□□□□ -0.44
CDRT1-202ENST00000354433 PCSK1P29120 753 aa12.3□□□□□ -0.44
CDRT1-202ENST00000354433 LHX1P48742 406 aa12.3□□□□□ -0.44
CDRT1-202ENST00000354433 MAN2A1Q16706 1144 aa12.3□□□□□ -0.44
CDRT1-202ENST00000354433 GAREM2Q75VX8 874 aa12.3□□□□□ -0.44
CDRT1-202ENST00000354433 SPATA2LQ8IUW3 424 aaPredicted RBP12.3□□□□□ -0.44
CDRT1-202ENST00000354433 ARID3BQ8IVW6 561 aaPredicted RBP12.3□□□□□ -0.44
CDRT1-202ENST00000354433 MFSD6LQ8IWD5 586 aa12.3□□□□□ -0.44
CDRT1-202ENST00000354433 STKLD1Q8NE28 680 aa12.3□□□□□ -0.44
CDRT1-202ENST00000354433 MMS19Q96T76 1030 aa12.3□□□□□ -0.44
CDRT1-202ENST00000354433 ACBD6Q9BR61 282 aa12.3□□□□□ -0.44
CDRT1-202ENST00000354433 DDX23Q9BUQ8 820 aaKnown RBP12.3□□□□□ -0.44
CDRT1-202ENST00000354433 NUP58Q9BVL2 599 aa12.3□□□□□ -0.44
CDRT1-202ENST00000354433 NAA15Q9BXJ9 866 aaKnown RBP12.3□□□□□ -0.44
CDRT1-202ENST00000354433 TMLHEQ9NVH6 421 aa12.3□□□□□ -0.44
CDRT1-202ENST00000354433 GDAP2Q9NXN4 497 aa12.3□□□□□ -0.44
CDRT1-202ENST00000354433 MTF2Q9Y483 593 aaPredicted RBP12.3□□□□□ -0.44
CDRT1-202ENST00000354433 PIAS3Q9Y6X2 628 aa12.3□□□□□ -0.44
CDRT1-202ENST00000354433 CETN3O15182 167 aa12.3□□□□□ -0.44
CDRT1-202ENST00000354433 ARHGAP6O43182 974 aa12.3□□□□□ -0.44
CDRT1-202ENST00000354433 LAMTOR5O43504 91 aa12.3□□□□□ -0.44
CDRT1-202ENST00000354433 HCRTO43612 131 aa12.3□□□□□ -0.44
CDRT1-202ENST00000354433 RPL13P26373 211 aaKnown RBP12.3□□□□□ -0.44
CDRT1-202ENST00000354433 GPR15P49685 360 aa12.3□□□□□ -0.44
CDRT1-202ENST00000354433 PSMC1P62191 440 aaKnown RBP12.3□□□□□ -0.44
CDRT1-202ENST00000354433 SNRPFP62306 86 aaKnown RBP12.3□□□□□ -0.44
CDRT1-202ENST00000354433 TRPC3Q13507 836 aa12.3□□□□□ -0.44
CDRT1-202ENST00000354433 FKBP15Q5T1M5 1219 aa12.3□□□□□ -0.44
CDRT1-202ENST00000354433 SDHAF4Q5VUM1 108 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms