RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 KIRREL3Q8IZU9 778 aa9.07□□□□□ -0.96
TRIM55-204ENST00000353317 CYP4X1Q8N118 509 aa9.07□□□□□ -0.96
TRIM55-204ENST00000353317 FITM2Q8N6M3 262 aa9.07□□□□□ -0.96
TRIM55-204ENST00000353317 ANKRD42Q8N9B4 389 aa9.07□□□□□ -0.96
TRIM55-204ENST00000353317 GDAP1Q8TB36 358 aa9.07□□□□□ -0.96
TRIM55-204ENST00000353317 AGAP11Q8TF27 550 aa9.07□□□□□ -0.96
TRIM55-204ENST00000353317 MIEF2Q96C03 454 aa9.07□□□□□ -0.96
TRIM55-204ENST00000353317 PWWP2AQ96N64 755 aa9.07□□□□□ -0.96
TRIM55-204ENST00000353317 ZMAT2Q96NC0 199 aaKnown RBP9.07□□□□□ -0.96
TRIM55-204ENST00000353317 HERPUD2Q9BSE4 406 aa9.07□□□□□ -0.96
TRIM55-204ENST00000353317 XYLT2Q9H1B5 865 aa9.07□□□□□ -0.96
TRIM55-204ENST00000353317 ECT2Q9H8V3 914 aa9.07□□□□□ -0.96
TRIM55-204ENST00000353317 TRMT13Q9NUP7 481 aaKnown RBP9.07□□□□□ -0.96
TRIM55-204ENST00000353317 UVRAGQ9P2Y5 699 aa9.07□□□□□ -0.96
TRIM55-204ENST00000353317 ASIC3Q9UHC3 531 aa9.07□□□□□ -0.96
TRIM55-204ENST00000353317 MEIS3P2A8K0S8 358 aa9.06□□□□□ -0.96
TRIM55-204ENST00000353317 SUN1O94901 812 aa9.06□□□□□ -0.96
TRIM55-204ENST00000353317 NPTXRO95502 500 aa9.06□□□□□ -0.96
TRIM55-204ENST00000353317 TTC4O95801 387 aa9.06□□□□□ -0.96
TRIM55-204ENST00000353317 CTSHP09668 335 aa9.06□□□□□ -0.96
TRIM55-204ENST00000353317 TFAMQ00059 246 aaKnown RBP9.06□□□□□ -0.96
TRIM55-204ENST00000353317 MYO1EQ12965 1108 aa9.06□□□□□ -0.96
TRIM55-204ENST00000353317 NCOA4Q13772 614 aa9.06□□□□□ -0.96
TRIM55-204ENST00000353317 FAM47CQ5HY64 1035 aa9.06□□□□□ -0.96
TRIM55-204ENST00000353317 UBXN11Q5T124 520 aa9.06□□□□□ -0.96
TRIM55-204ENST00000353317 KIF2BQ8N4N8 673 aa9.06□□□□□ -0.96
TRIM55-204ENST00000353317 C1orf127Q8N9H9 656 aa9.06□□□□□ -0.96
TRIM55-204ENST00000353317 CKAP2Q8WWK9 683 aa9.06□□□□□ -0.96
TRIM55-204ENST00000353317 TRIM7Q9C029 511 aa9.06□□□□□ -0.96
TRIM55-204ENST00000353317 NXF3Q9H4D5 531 aaKnown RBP9.06□□□□□ -0.96
TRIM55-204ENST00000353317 KCNK9Q9NPC2 374 aa9.06□□□□□ -0.96
TRIM55-204ENST00000353317 SNTG2Q9NY99 539 aa9.06□□□□□ -0.96
TRIM55-204ENST00000353317 TET1Q8NFU7 2136 aa9.06□□□□□ -0.96
TRIM55-204ENST00000353317 B4GALT4O60513 344 aa9.06□□□□□ -0.96
TRIM55-204ENST00000353317 FKTNO75072 461 aa9.06□□□□□ -0.96
TRIM55-204ENST00000353317 GJB6O95452 261 aa9.06□□□□□ -0.96
TRIM55-204ENST00000353317 ANP32DO95626 131 aa9.06□□□□□ -0.96
TRIM55-204ENST00000353317 MCF2P10911 925 aa9.06□□□□□ -0.96
TRIM55-204ENST00000353317 ALADP13716 330 aa9.06□□□□□ -0.96
TRIM55-204ENST00000353317 BRAFP15056 766 aa9.06□□□□□ -0.96
TRIM55-204ENST00000353317 ITIH2P19823 946 aa9.06□□□□□ -0.96
TRIM55-204ENST00000353317 AKAP5P24588 427 aa9.06□□□□□ -0.96
TRIM55-204ENST00000353317 IGFBP6P24592 240 aaPredicted RBP9.06□□□□□ -0.96
TRIM55-204ENST00000353317 SSTR3P32745 418 aaPredicted RBP9.06□□□□□ -0.96
TRIM55-204ENST00000353317 PIK3CAP42336 1068 aa9.06□□□□□ -0.96
TRIM55-204ENST00000353317 ITGA8P53708 1063 aa9.06□□□□□ -0.96
TRIM55-204ENST00000353317 COPS2P61201 443 aa9.06□□□□□ -0.96
TRIM55-204ENST00000353317 CDR2Q01850 454 aa9.06□□□□□ -0.96
TRIM55-204ENST00000353317 ENPEPQ07075 957 aa9.06□□□□□ -0.96
TRIM55-204ENST00000353317 ZKSCAN8Q15776 578 aaPredicted RBP9.06□□□□□ -0.96
TRIM55-204ENST00000353317 CATSPER4Q7RTX7 472 aa9.06□□□□□ -0.96
TRIM55-204ENST00000353317 SERINC5Q86VE9 423 aa9.06□□□□□ -0.96
TRIM55-204ENST00000353317 WDR49Q8IV35 697 aa9.06□□□□□ -0.96
TRIM55-204ENST00000353317 ARRDC4Q8NCT1 418 aa9.06□□□□□ -0.96
TRIM55-204ENST00000353317 PXYLP1Q8TE99 480 aa9.06□□□□□ -0.96
TRIM55-204ENST00000353317 NSMCE1Q8WV22 266 aa9.06□□□□□ -0.96
TRIM55-204ENST00000353317 DDX1Q92499 740 aaKnown RBP9.06□□□□□ -0.96
TRIM55-204ENST00000353317 PRCCQ92733 491 aaPredicted RBP9.06□□□□□ -0.96
TRIM55-204ENST00000353317 SNF8Q96H20 258 aa9.06□□□□□ -0.96
TRIM55-204ENST00000353317 NT5C1BQ96P26 610 aa9.06□□□□□ -0.96
TRIM55-204ENST00000353317 KATNAL1Q9BW62 490 aa9.06□□□□□ -0.96
TRIM55-204ENST00000353317 GCOM2Q9BZD3 368 aaPredicted RBP9.06□□□□□ -0.96
TRIM55-204ENST00000353317 AGO3Q9H9G7 860 aaKnown RBP9.06□□□□□ -0.96
TRIM55-204ENST00000353317 TBK1Q9UHD2 729 aa9.06□□□□□ -0.96
TRIM55-204ENST00000353317 A8MUI8 341 aa9.05□□□□□ -0.96
TRIM55-204ENST00000353317 PPEF2O14830 753 aa9.05□□□□□ -0.96
TRIM55-204ENST00000353317 KRT16P08779 473 aa9.05□□□□□ -0.96
TRIM55-204ENST00000353317 CST5P28325 142 aaPredicted RBP9.05□□□□□ -0.96
TRIM55-204ENST00000353317 GBP2P32456 591 aaPredicted RBP9.05□□□□□ -0.96
TRIM55-204ENST00000353317 AFF1P51825 1210 aaKnown RBP9.05□□□□□ -0.96
TRIM55-204ENST00000353317 ACLYP53396 1101 aa9.05□□□□□ -0.96
TRIM55-204ENST00000353317 MFAP3P55082 362 aa9.05□□□□□ -0.96
TRIM55-204ENST00000353317 ADCY1Q08828 1119 aa9.05□□□□□ -0.96
TRIM55-204ENST00000353317 MGAT5Q09328 741 aa9.05□□□□□ -0.96
TRIM55-204ENST00000353317 CGB2Q6NT52 195 aa9.05□□□□□ -0.96
TRIM55-204ENST00000353317 SPATA21Q7Z572 469 aa9.05□□□□□ -0.96
TRIM55-204ENST00000353317 GBP7Q8N8V2 638 aaPredicted RBP9.05□□□□□ -0.96
TRIM55-204ENST00000353317 KLHL29Q96CT2 875 aa9.05□□□□□ -0.96
TRIM55-204ENST00000353317 THOC1Q96FV9 657 aaKnown RBP9.05□□□□□ -0.96
TRIM55-204ENST00000353317 RMDN2Q96LZ7 410 aa9.05□□□□□ -0.96
TRIM55-204ENST00000353317 RPF1Q9H9Y2 349 aaKnown RBP9.05□□□□□ -0.96
TRIM55-204ENST00000353317 PRKAG3Q9UGI9 489 aa9.05□□□□□ -0.96
TRIM55-204ENST00000353317 ANAPC7Q9UJX3 599 aa9.05□□□□□ -0.96
TRIM55-204ENST00000353317 POLIQ9UNA4 740 aa9.05□□□□□ -0.96
TRIM55-204ENST00000353317 CDY2AQ9Y6F7 541 aa9.05□□□□□ -0.96
TRIM55-204ENST00000353317 HGSO14964 777 aaPredicted RBP9.05□□□□□ -0.96
TRIM55-204ENST00000353317 THAP12O43422 761 aa9.05□□□□□ -0.96
TRIM55-204ENST00000353317 KIF1CO43896 1103 aaKnown RBP9.05□□□□□ -0.96
TRIM55-204ENST00000353317 ASS1P00966 412 aaKnown RBP9.05□□□□□ -0.96
TRIM55-204ENST00000353317 ATP5DP30049 168 aa9.05□□□□□ -0.96
TRIM55-204ENST00000353317 VPS41P49754 854 aa9.05□□□□□ -0.96
TRIM55-204ENST00000353317 CLNS1AP54105 237 aaKnown RBP9.05□□□□□ -0.96
TRIM55-204ENST00000353317 NOP14P78316 857 aaKnown RBP9.05□□□□□ -0.96
TRIM55-204ENST00000353317 MTFR1Q15390 333 aa9.05□□□□□ -0.96
TRIM55-204ENST00000353317 GLRA4Q5JXX5 417 aa9.05□□□□□ -0.96
TRIM55-204ENST00000353317 DAB2IPQ5VWQ8 1189 aa9.05□□□□□ -0.96
TRIM55-204ENST00000353317 ANKLE1Q8NAG6 615 aa9.05□□□□□ -0.96
TRIM55-204ENST00000353317 TGS1Q96RS0 853 aaKnown RBP9.05□□□□□ -0.96
TRIM55-204ENST00000353317 ARHGEF3Q9NR81 526 aa9.05□□□□□ -0.96
TRIM55-204ENST00000353317 TRIM33Q9UPN9 1127 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms