RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 COBLL1Q53SF7 1204 aa14.3□□□□□ -0.12
SMC6-201ENST00000351948 NYAP1Q6ZVC0 841 aa14.3□□□□□ -0.12
SMC6-201ENST00000351948 GPR20Q99678 358 aa14.3□□□□□ -0.12
SMC6-201ENST00000351948 DDX23Q9BUQ8 820 aaKnown RBP14.3□□□□□ -0.12
SMC6-201ENST00000351948 CATSPERBQ9H7T0 1116 aa14.3□□□□□ -0.12
SMC6-201ENST00000351948 PLA2G6O60733 806 aa14.3□□□□□ -0.12
SMC6-201ENST00000351948 ASMTLO95671 621 aa14.3□□□□□ -0.12
SMC6-201ENST00000351948 MYL4P12829 197 aa14.3□□□□□ -0.12
SMC6-201ENST00000351948 COPS2P61201 443 aa14.3□□□□□ -0.12
SMC6-201ENST00000351948 BST2Q10589 180 aaKnown RBP14.3□□□□□ -0.12
SMC6-201ENST00000351948 SCG3Q8WXD2 468 aaKnown RBP14.3□□□□□ -0.12
SMC6-201ENST00000351948 CYP3A43Q9HB55 503 aa14.3□□□□□ -0.12
SMC6-201ENST00000351948 USP18Q9UMW8 372 aa14.3□□□□□ -0.12
SMC6-201ENST00000351948 WSCD1Q658N2 575 aa14.3□□□□□ -0.12
SMC6-201ENST00000351948 PPP1R36Q96LQ0 422 aa14.3□□□□□ -0.12
SMC6-201ENST00000351948 OLA1Q9NTK5 396 aaKnown RBP14.3□□□□□ -0.12
SMC6-201ENST00000351948 ST3GAL5Q9UNP4 418 aa14.3□□□□□ -0.12
SMC6-201ENST00000351948 SOWAHBA6NEL2 793 aa14.3□□□□□ -0.12
SMC6-201ENST00000351948 GZMAP12544 262 aa14.3□□□□□ -0.12
SMC6-201ENST00000351948 COILP38432 576 aaPredicted RBP14.3□□□□□ -0.12
SMC6-201ENST00000351948 DUSP28Q4G0W2 176 aa14.3□□□□□ -0.12
SMC6-201ENST00000351948 SLC39A12Q504Y0 691 aa14.3□□□□□ -0.12
SMC6-201ENST00000351948 ABHD15Q6UXT9 468 aa14.3□□□□□ -0.12
SMC6-201ENST00000351948 INTUQ9ULD6 942 aa14.3□□□□□ -0.12
SMC6-201ENST00000351948 KIAA1257Q9ULG3 409 aa14.3□□□□□ -0.12
SMC6-201ENST00000351948 A0A0U1RQJ8 604 aa14.29□□□□□ -0.12
SMC6-201ENST00000351948 H7C4K7 107 aa14.29□□□□□ -0.12
SMC6-201ENST00000351948 MICAL2O94851 1124 aa14.29□□□□□ -0.12
SMC6-201ENST00000351948 BEND6Q5SZJ8 279 aaPredicted RBP14.29□□□□□ -0.12
SMC6-201ENST00000351948 SLFN11Q7Z7L1 901 aa14.29□□□□□ -0.12
SMC6-201ENST00000351948 ANKRD23Q86SG2 305 aa14.29□□□□□ -0.12
SMC6-201ENST00000351948 MRPS31Q92665 395 aaKnown RBP14.29□□□□□ -0.12
SMC6-201ENST00000351948 SENP8Q96LD8 212 aa14.29□□□□□ -0.12
SMC6-201ENST00000351948 TMEM121Q9BTD3 319 aa14.29□□□□□ -0.12
SMC6-201ENST00000351948 CARD9Q9H257 536 aa14.29□□□□□ -0.12
SMC6-201ENST00000351948 KLRG2A4D1S0 409 aaPredicted RBP14.29□□□□□ -0.12
SMC6-201ENST00000351948 NVLO15381 856 aaKnown RBP14.29□□□□□ -0.12
SMC6-201ENST00000351948 MRPS6P82932 125 aaKnown RBP14.29□□□□□ -0.12
SMC6-201ENST00000351948 DENND5BQ6ZUT9 1274 aa14.29□□□□□ -0.12
SMC6-201ENST00000351948 PLPPR4Q7Z2D5 763 aa14.29□□□□□ -0.12
SMC6-201ENST00000351948 MCOLN2Q8IZK6 566 aa14.29□□□□□ -0.12
SMC6-201ENST00000351948 ERLEC1Q96DZ1 483 aa14.29□□□□□ -0.12
SMC6-201ENST00000351948 CELF6Q96J87 481 aaKnown RBP14.29□□□□□ -0.12
SMC6-201ENST00000351948 TAS2R14Q9NYV8 317 aa14.29□□□□□ -0.12
SMC6-201ENST00000351948 PPARGC1AQ9UBK2 798 aaKnown RBP14.29□□□□□ -0.12
SMC6-201ENST00000351948 AP4E1Q9UPM8 1137 aa14.29□□□□□ -0.12
SMC6-201ENST00000351948 NT5C1B-RDH14C9J2C7 533 aa14.29□□□□□ -0.12
SMC6-201ENST00000351948 CTIFO43310 598 aaKnown RBP14.29□□□□□ -0.12
SMC6-201ENST00000351948 TAC1P20366 129 aa14.29□□□□□ -0.12
SMC6-201ENST00000351948 OTUD4Q01804 1114 aaKnown RBP14.29□□□□□ -0.12
SMC6-201ENST00000351948 KCTD19Q17RG1 926 aaPredicted RBP14.29□□□□□ -0.12
SMC6-201ENST00000351948 CRLF3Q8IUI8 442 aa14.29□□□□□ -0.12
SMC6-201ENST00000351948 ERP44Q9BS26 406 aa14.29□□□□□ -0.12
SMC6-201ENST00000351948 UBP1Q9NZI7 540 aa14.29□□□□□ -0.12
SMC6-201ENST00000351948 NFIL3Q16649 462 aa14.29□□□□□ -0.12
SMC6-201ENST00000351948 PHLDB3Q6NSJ2 640 aa14.29□□□□□ -0.12
SMC6-201ENST00000351948 CCNI2Q6ZMN8 369 aaPredicted RBP14.29□□□□□ -0.12
SMC6-201ENST00000351948 TFAP2DQ7Z6R9 452 aa14.29□□□□□ -0.12
SMC6-201ENST00000351948 HELQQ8TDG4 1101 aa14.29□□□□□ -0.12
SMC6-201ENST00000351948 IL17RAQ96F46 866 aa14.29□□□□□ -0.12
SMC6-201ENST00000351948 DDX27Q96GQ7 796 aaKnown RBP14.29□□□□□ -0.12
SMC6-201ENST00000351948 ACO2Q99798 780 aaKnown RBP14.29□□□□□ -0.12
SMC6-201ENST00000351948 ZNF214Q9UL59 606 aaPredicted RBP14.29□□□□□ -0.12
SMC6-201ENST00000351948 PCDHB12Q9Y5F1 795 aa14.29□□□□□ -0.12
SMC6-201ENST00000351948 RAB27AP51159 221 aa14.28□□□□□ -0.12
SMC6-201ENST00000351948 ATG16L1Q676U5 607 aa14.28□□□□□ -0.12
SMC6-201ENST00000351948 C3orf62Q6ZUJ4 267 aa14.28□□□□□ -0.12
SMC6-201ENST00000351948 PALB2Q86YC2 1186 aa14.28□□□□□ -0.12
SMC6-201ENST00000351948 PPHLN1Q8NEY8 458 aaKnown RBP14.28□□□□□ -0.12
SMC6-201ENST00000351948 BSNDQ8WZ55 320 aa14.28□□□□□ -0.12
SMC6-201ENST00000351948 NXF3Q9H4D5 531 aaKnown RBP14.28□□□□□ -0.12
SMC6-201ENST00000351948 TRPM5Q9NZQ8 1165 aa14.28□□□□□ -0.12
SMC6-201ENST00000351948 RBPJLQ9UBG7 517 aa14.28□□□□□ -0.12
SMC6-201ENST00000351948 TREHO43280 583 aa14.28□□□□□ -0.12
SMC6-201ENST00000351948 KCNA2P16389 499 aa14.28□□□□□ -0.12
SMC6-201ENST00000351948 ZNF200P98182 395 aaPredicted RBP14.28□□□□□ -0.12
SMC6-201ENST00000351948 FAM237AA0A1B0GTK4 181 aa14.28□□□□□ -0.12
SMC6-201ENST00000351948 E5RJQ4 531 aa14.28□□□□□ -0.12
SMC6-201ENST00000351948 TGFB1I1O43294 461 aa14.28□□□□□ -0.12
SMC6-201ENST00000351948 ARF4P18085 180 aaPredicted RBP14.28□□□□□ -0.12
SMC6-201ENST00000351948 ITIH2P19823 946 aa14.28□□□□□ -0.12
SMC6-201ENST00000351948 GUCY1A3Q02108 690 aa14.28□□□□□ -0.12
SMC6-201ENST00000351948 GCNT1Q02742 428 aa14.28□□□□□ -0.12
SMC6-201ENST00000351948 CNPY3Q9BT09 278 aa14.28□□□□□ -0.12
SMC6-201ENST00000351948 TSPYL2Q9H2G4 693 aaPredicted RBP14.28□□□□□ -0.12
SMC6-201ENST00000351948 GOLGA2P5Q9HBQ8 144 aa14.28□□□□□ -0.12
SMC6-201ENST00000351948 PPME1Q9Y570 386 aa14.28□□□□□ -0.12
SMC6-201ENST00000351948 CICQ96RK0 1608 aaPredicted RBP14.28□□□□□ -0.12
SMC6-201ENST00000351948 PROSCO94903 275 aa14.28□□□□□ -0.12
SMC6-201ENST00000351948 SLC11A2P49281 568 aa14.28□□□□□ -0.12
SMC6-201ENST00000351948 NFE2Q16621 373 aaPredicted RBP14.28□□□□□ -0.12
SMC6-201ENST00000351948 BRI3BPQ8WY22 251 aa14.28□□□□□ -0.12
SMC6-201ENST00000351948 KLHL29Q96CT2 875 aa14.28□□□□□ -0.12
SMC6-201ENST00000351948 AIPL1Q9NZN9 384 aa14.28□□□□□ -0.12
SMC6-201ENST00000351948 TARSL2A2RTX5 802 aaKnown RBP14.28□□□□□ -0.12
SMC6-201ENST00000351948 MMP3P08254 477 aa14.28□□□□□ -0.12
SMC6-201ENST00000351948 AKT1P31749 480 aa14.28□□□□□ -0.12
SMC6-201ENST00000351948 PTENP60484 403 aa14.28□□□□□ -0.12
SMC6-201ENST00000351948 PPP2R2AP63151 447 aa14.28□□□□□ -0.12
SMC6-201ENST00000351948 CARNMT1Q8N4J0 409 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms