RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 C8orf48Q96LL4 319 aa16.78■□□□□ 0.28
TSPAN4-201ENST00000346501 ZSWIM3Q96MP5 696 aa16.78■□□□□ 0.28
TSPAN4-201ENST00000346501 RAB20Q9NX57 234 aa16.78■□□□□ 0.28
TSPAN4-201ENST00000346501 OBP2AQ9NY56 170 aa16.78■□□□□ 0.28
TSPAN4-201ENST00000346501 CTNND2Q9UQB3 1225 aa16.78■□□□□ 0.28
TSPAN4-201ENST00000346501 NCAM2O15394 837 aa16.77■□□□□ 0.28
TSPAN4-201ENST00000346501 HMGA1P17096 107 aaKnown RBP16.77■□□□□ 0.28
TSPAN4-201ENST00000346501 WEE1P30291 646 aa16.77■□□□□ 0.28
TSPAN4-201ENST00000346501 GDI1P31150 447 aa16.77■□□□□ 0.28
TSPAN4-201ENST00000346501 VIPR2P41587 438 aa16.77■□□□□ 0.28
TSPAN4-201ENST00000346501 PPP3CCP48454 512 aa16.77■□□□□ 0.28
TSPAN4-201ENST00000346501 NDST1P52848 882 aa16.77■□□□□ 0.28
TSPAN4-201ENST00000346501 YWHAEP62258 255 aaKnown RBP16.77■□□□□ 0.28
TSPAN4-201ENST00000346501 GRM2Q14416 872 aa16.77■□□□□ 0.28
TSPAN4-201ENST00000346501 MLF2Q15773 248 aaPredicted RBP16.77■□□□□ 0.28
TSPAN4-201ENST00000346501 PHLDB3Q6NSJ2 640 aa16.77■□□□□ 0.28
TSPAN4-201ENST00000346501 ACOT1Q86TX2 421 aa16.77■□□□□ 0.28
TSPAN4-201ENST00000346501 ZC3H3Q8IXZ2 948 aaKnown RBP16.77■□□□□ 0.28
TSPAN4-201ENST00000346501 CELF5Q8N6W0 485 aaKnown RBP16.77■□□□□ 0.28
TSPAN4-201ENST00000346501 SMARCD1Q96GM5 515 aa16.77■□□□□ 0.28
TSPAN4-201ENST00000346501 MYRFLQ96LU7 910 aa16.77■□□□□ 0.28
TSPAN4-201ENST00000346501 SLITRK1Q96PX8 696 aa16.77■□□□□ 0.28
TSPAN4-201ENST00000346501 NELL2Q99435 816 aa16.77■□□□□ 0.28
TSPAN4-201ENST00000346501 NT5C1AQ9BXI3 368 aa16.77■□□□□ 0.28
TSPAN4-201ENST00000346501 DPEP3Q9H4B8 488 aa16.77■□□□□ 0.28
TSPAN4-201ENST00000346501 FAM124BQ9H5Z6 455 aaPredicted RBP16.77■□□□□ 0.28
TSPAN4-201ENST00000346501 TBC1D17Q9HA65 648 aa16.77■□□□□ 0.28
TSPAN4-201ENST00000346501 KIF9Q9HAQ2 790 aa16.77■□□□□ 0.28
TSPAN4-201ENST00000346501 IL21Q9HBE4 155 aa16.77■□□□□ 0.28
TSPAN4-201ENST00000346501 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.77■□□□□ 0.285e-7■■■■■ 86.5
TSPAN4-201ENST00000346501 TRPM5Q9NZQ8 1165 aa16.77■□□□□ 0.28
TSPAN4-201ENST00000346501 F8VP50 259 aa16.76■□□□□ 0.27
TSPAN4-201ENST00000346501 RTN3O95197 1032 aaPredicted RBP16.76■□□□□ 0.27
TSPAN4-201ENST00000346501 F11P03951 625 aa16.76■□□□□ 0.27
TSPAN4-201ENST00000346501 CCDC192P0DO97 292 aa16.76■□□□□ 0.27
TSPAN4-201ENST00000346501 AOC1P19801 751 aa16.76■□□□□ 0.27
TSPAN4-201ENST00000346501 FCARP24071 287 aa16.76■□□□□ 0.27
TSPAN4-201ENST00000346501 PMS1P54277 932 aaKnown RBP16.76■□□□□ 0.27
TSPAN4-201ENST00000346501 PLCB2Q00722 1185 aa16.76■□□□□ 0.27
TSPAN4-201ENST00000346501 TPD52L1Q16890 204 aaPredicted RBP16.76■□□□□ 0.27
TSPAN4-201ENST00000346501 ARHGAP29Q52LW3 1261 aa16.76■□□□□ 0.27
TSPAN4-201ENST00000346501 STXBP5Q5T5C0 1151 aa16.76■□□□□ 0.27
TSPAN4-201ENST00000346501 SPOPLQ6IQ16 392 aa16.76■□□□□ 0.27
TSPAN4-201ENST00000346501 CC2D1AQ6P1N0 951 aaPredicted RBP16.76■□□□□ 0.27
TSPAN4-201ENST00000346501 VITQ6UXI7 678 aa16.76■□□□□ 0.27
TSPAN4-201ENST00000346501 MON1AQ86VX9 555 aa16.76■□□□□ 0.27
TSPAN4-201ENST00000346501 CMTM8Q8IZV2 173 aa16.76■□□□□ 0.27
TSPAN4-201ENST00000346501 CRYBG2Q8N1P7 616 aa16.76■□□□□ 0.27
TSPAN4-201ENST00000346501 MAB21L3Q8N8X9 362 aa16.76■□□□□ 0.27
TSPAN4-201ENST00000346501 BPIFB1Q8TDL5 484 aa16.76■□□□□ 0.27
TSPAN4-201ENST00000346501 FAM122AQ96E09 287 aa16.76■□□□□ 0.27
TSPAN4-201ENST00000346501 IPO9Q96P70 1041 aaKnown RBP16.76■□□□□ 0.27
TSPAN4-201ENST00000346501 BCO2Q9BYV7 579 aa16.76■□□□□ 0.27
TSPAN4-201ENST00000346501 PLA2G2FQ9BZM2 168 aa16.76■□□□□ 0.27
TSPAN4-201ENST00000346501 NUP62CLQ9H1M0 184 aa16.76■□□□□ 0.27
TSPAN4-201ENST00000346501 TRPC7Q9HCX4 862 aa16.76■□□□□ 0.27
TSPAN4-201ENST00000346501 DMAP1Q9NPF5 467 aaPredicted RBP16.76■□□□□ 0.27
TSPAN4-201ENST00000346501 DACH1Q9UI36 760 aa16.76■□□□□ 0.27
TSPAN4-201ENST00000346501 TRAV19A0A0A6YYK7 116 aa16.75■□□□□ 0.27
TSPAN4-201ENST00000346501 KRBA1A5PL33 1030 aa16.75■□□□□ 0.27
TSPAN4-201ENST00000346501 PPP1R3GB7ZBB8 358 aa16.75■□□□□ 0.27
TSPAN4-201ENST00000346501 MAN2B1O00754 1011 aa16.75■□□□□ 0.27
TSPAN4-201ENST00000346501 CHADO15335 359 aa16.75■□□□□ 0.27
TSPAN4-201ENST00000346501 USP17L7P0C7H9 530 aa16.75■□□□□ 0.27
TSPAN4-201ENST00000346501 CD44P16070 742 aaKnown RBP16.75■□□□□ 0.27
TSPAN4-201ENST00000346501 CD58P19256 250 aa16.75■□□□□ 0.27
TSPAN4-201ENST00000346501 ASPAP45381 313 aa16.75■□□□□ 0.27
TSPAN4-201ENST00000346501 PTPN5P54829 565 aa16.75■□□□□ 0.27
TSPAN4-201ENST00000346501 VCPP55072 806 aaKnown RBP16.75■□□□□ 0.27
TSPAN4-201ENST00000346501 MCCD1P59942 119 aaPredicted RBP16.75■□□□□ 0.27
TSPAN4-201ENST00000346501 CCDC142Q17RM4 750 aa16.75■□□□□ 0.27
TSPAN4-201ENST00000346501 TTI2Q6NXR4 508 aa16.75■□□□□ 0.27
TSPAN4-201ENST00000346501 C1orf228Q6PIY5 440 aa16.75■□□□□ 0.27
TSPAN4-201ENST00000346501 ZNF852Q6ZMS4 543 aa16.75■□□□□ 0.27
TSPAN4-201ENST00000346501 CLEC17AQ6ZS10 378 aa16.75■□□□□ 0.27
TSPAN4-201ENST00000346501 FAM35AQ86V20 835 aa16.75■□□□□ 0.27
TSPAN4-201ENST00000346501 MLKLQ8NB16 471 aa16.75■□□□□ 0.27
TSPAN4-201ENST00000346501 B3GNT5Q9BYG0 378 aa16.75■□□□□ 0.27
TSPAN4-201ENST00000346501 ZNF518BQ9C0D4 1074 aa16.75■□□□□ 0.27
TSPAN4-201ENST00000346501 CLSTN2Q9H4D0 955 aa16.75■□□□□ 0.27
TSPAN4-201ENST00000346501 TRPV5Q9NQA5 729 aa16.75■□□□□ 0.27
TSPAN4-201ENST00000346501 TDP1Q9NUW8 608 aa16.75■□□□□ 0.27
TSPAN4-201ENST00000346501 SIT1Q9Y3P8 196 aa16.75■□□□□ 0.27
TSPAN4-201ENST00000346501 ZDBF2Q9HCK1 2354 aa16.75■□□□□ 0.27
TSPAN4-201ENST00000346501 KANSL1LA0AUZ9 987 aa16.74■□□□□ 0.27
TSPAN4-201ENST00000346501 AP1G2O75843 785 aa16.74■□□□□ 0.27
TSPAN4-201ENST00000346501 ABL1P00519 1130 aa16.74■□□□□ 0.27
TSPAN4-201ENST00000346501 CKMP06732 381 aa16.74■□□□□ 0.27
TSPAN4-201ENST00000346501 GLULP15104 373 aa16.74■□□□□ 0.27
TSPAN4-201ENST00000346501 PFKLP17858 780 aa16.74■□□□□ 0.27
TSPAN4-201ENST00000346501 YWHAQP27348 245 aa16.74■□□□□ 0.27
TSPAN4-201ENST00000346501 STX17P56962 302 aa16.74■□□□□ 0.27
TSPAN4-201ENST00000346501 SLC8A3P57103 927 aa16.74■□□□□ 0.27
TSPAN4-201ENST00000346501 STARD6P59095 220 aa16.74■□□□□ 0.27
TSPAN4-201ENST00000346501 INCA1Q0VD86 236 aa16.74■□□□□ 0.27
TSPAN4-201ENST00000346501 UBXN2BQ14CS0 331 aa16.74■□□□□ 0.27
TSPAN4-201ENST00000346501 TPRG1Q6ZUI0 275 aa16.74■□□□□ 0.27
TSPAN4-201ENST00000346501 NUP93Q8N1F7 819 aa16.74■□□□□ 0.27
TSPAN4-201ENST00000346501 STKLD1Q8NE28 680 aa16.74■□□□□ 0.27
TSPAN4-201ENST00000346501 PDZD8Q8NEN9 1154 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms