RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 STYK1Q6J9G0 422 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 C11orf63Q6NUN7 778 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 TMC3Q7Z5M5 1100 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 ARL10Q8N8L6 244 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 PPHLN1Q8NEY8 458 aaKnown RBP8.39□□□□□ -1.07
UBE4B-202ENST00000343090 LZICQ8WZA0 190 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 PABPC5Q96DU9 382 aaKnown RBP8.39□□□□□ -1.07
UBE4B-202ENST00000343090 GMCL1Q96IK5 515 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 CCDC90BQ9GZT6 254 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 FAM192AQ9GZU8 254 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 KLHL33A6NCF5 533 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 IL18RAPO95256 599 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 KRT16P08779 473 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 PYGMP11217 842 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 PEX5P50542 639 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 ZNF235Q14590 738 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 DENND5BQ6ZUT9 1274 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 PTPRN2Q92932 1015 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 ULK4Q96C45 1275 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 MTBPQ96DY7 904 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 CATSPER2Q96P56 530 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 AGO4Q9HCK5 861 aaKnown RBP8.39□□□□□ -1.07
UBE4B-202ENST00000343090 MAFGO15525 162 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 MGRN1O60291 552 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 GJB6O95452 261 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 GFAPP14136 432 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 RPL21P46778 160 aaKnown RBP8.39□□□□□ -1.07
UBE4B-202ENST00000343090 MYL6P60660 151 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 PPATQ06203 517 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 R3HDM1Q15032 1099 aaKnown RBP8.39□□□□□ -1.07
UBE4B-202ENST00000343090 CNGA3Q16281 694 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 MEA1Q16626 185 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 KYAT1Q16773 422 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 CBWD6Q4V339 395 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 LACTB2Q53H82 288 aaPredicted RBP8.39□□□□□ -1.07
UBE4B-202ENST00000343090 CBWD3Q5JTY5 395 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 CBWD5Q5RIA9 395 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 FASTKD5Q7L8L6 764 aaKnown RBP8.39□□□□□ -1.07
UBE4B-202ENST00000343090 GMCL1P1Q8NEA9 526 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 IPMKQ8NFU5 416 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 SGF29Q96ES7 293 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 MAGEB18Q96M61 343 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 ACP6Q9NPH0 428 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 NDFIP2Q9NV92 336 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 HEY2Q9UBP5 337 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 SIK3Q9Y2K2 1263 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 TMX2Q9Y320 296 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 RIC1Q4ADV7 1423 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 GH1P01241 217 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 ATP6V1C1P21283 382 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 PTENP60484 403 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 USP4Q13107 963 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 ERMARDQ5T6L9 678 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 RNF220Q5VTB9 566 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 WDR59Q6PJI9 974 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 MTHFD1LQ6UB35 978 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 ACOT1Q86TX2 421 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 GALNT4Q8N4A0 578 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 KCTD17Q8N5Z5 321 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 RFWD2Q8NHY2 731 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 RBM46Q8TBY0 533 aaKnown RBP8.38□□□□□ -1.07
UBE4B-202ENST00000343090 ZNF669Q96BR6 464 aaPredicted RBP8.38□□□□□ -1.07
UBE4B-202ENST00000343090 THAP11Q96EK4 314 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 FOXP3Q9BZS1 431 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 MTO1Q9Y2Z2 717 aaKnown RBP8.38□□□□□ -1.07
UBE4B-202ENST00000343090 A0A0A6YYK5 440 aaPredicted RBP8.38□□□□□ -1.07
UBE4B-202ENST00000343090 TPD52L2O43399 206 aaKnown RBP8.38□□□□□ -1.07
UBE4B-202ENST00000343090 CLEC16AQ2KHT3 1053 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 MIIPQ5JXC2 388 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 RARS2Q5T160 578 aaKnown RBP8.38□□□□□ -1.07
UBE4B-202ENST00000343090 RIMS1Q86UR5 1692 aaKnown RBP8.38□□□□□ -1.07
UBE4B-202ENST00000343090 NUP93Q8N1F7 819 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 ATPAF2Q8N5M1 289 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 CPB2Q96IY4 423 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 NEURL4Q96JN8 1562 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 MED15Q96RN5 788 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 DDX18Q9NVP1 670 aaKnown RBP8.38□□□□□ -1.07
UBE4B-202ENST00000343090 BCL9O00512 1426 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 MST1RQ04912 1400 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 KLRC4O43908 158 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 SMNDC1O75940 238 aaKnown RBP eCLIP8.38□□□□□ -1.073e-6■□□□□ 9.1
UBE4B-202ENST00000343090 RTN3O95197 1032 aaPredicted RBP8.38□□□□□ -1.07
UBE4B-202ENST00000343090 PYGLP06737 847 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 KCNA2P16389 499 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 GNL1P36915 607 aaPredicted RBP8.38□□□□□ -1.07
UBE4B-202ENST00000343090 PTDSS1P48651 473 aaKnown RBP8.38□□□□□ -1.07
UBE4B-202ENST00000343090 SLC12A3P55017 1021 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 STILQ15468 1287 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 DCAF4L1Q3SXM0 396 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 MFSD4BQ5TF39 518 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 LAYNQ6UX15 382 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 SZRD1Q7Z422 152 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 SPATA2LQ8IUW3 424 aaPredicted RBP8.38□□□□□ -1.07
UBE4B-202ENST00000343090 RIBC1Q8N443 379 aaPredicted RBP8.38□□□□□ -1.07
UBE4B-202ENST00000343090 MREGQ8N565 214 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 SYTL5Q8TDW5 730 aaPredicted RBP8.38□□□□□ -1.07
UBE4B-202ENST00000343090 MTMR9Q96QG7 549 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 MYLK2Q9H1R3 596 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 OLFML3Q9NRN5 406 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 WHRNQ9P202 907 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms