RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 SCG3Q8WXD2 468 aaKnown RBP12.96□□□□□ -0.33
SNRNP48-201ENST00000342415 MKL1Q969V6 931 aa12.96□□□□□ -0.33
SNRNP48-201ENST00000342415 DCPSQ96C86 337 aaKnown RBP12.96□□□□□ -0.33
SNRNP48-201ENST00000342415 FOXP3Q9BZS1 431 aa12.96□□□□□ -0.33
SNRNP48-201ENST00000342415 PAPOLBQ9NRJ5 636 aaKnown RBP12.96□□□□□ -0.33
SNRNP48-201ENST00000342415 ZDHHC18Q9NUE0 388 aa12.96□□□□□ -0.33
SNRNP48-201ENST00000342415 AFG3L2Q9Y4W6 797 aa12.96□□□□□ -0.33
SNRNP48-201ENST00000342415 H0YGN5 161 aa12.96□□□□□ -0.34
SNRNP48-201ENST00000342415 PDE5AO76074 875 aa12.96□□□□□ -0.34
SNRNP48-201ENST00000342415 PTGIRP43119 386 aa12.96□□□□□ -0.34
SNRNP48-201ENST00000342415 ABCG1P45844 678 aa12.96□□□□□ -0.34
SNRNP48-201ENST00000342415 PGM5Q15124 567 aa12.96□□□□□ -0.34
SNRNP48-201ENST00000342415 AFAP1L2Q8N4X5 818 aa12.96□□□□□ -0.34
SNRNP48-201ENST00000342415 TMEM161BQ8NDZ6 487 aa12.96□□□□□ -0.34
SNRNP48-201ENST00000342415 USP33Q8TEY7 942 aa12.96□□□□□ -0.34
SNRNP48-201ENST00000342415 NFS1Q9Y697 457 aa12.96□□□□□ -0.34
SNRNP48-201ENST00000342415 LRRC37A3O60309 1634 aa12.96□□□□□ -0.34
SNRNP48-201ENST00000342415 SPDYE2BA6NHP3 402 aa12.95□□□□□ -0.34
SNRNP48-201ENST00000342415 SPDYE6P0CI01 402 aa12.95□□□□□ -0.34
SNRNP48-201ENST00000342415 TAC1P20366 129 aa12.95□□□□□ -0.34
SNRNP48-201ENST00000342415 KCNA4P22459 653 aa12.95□□□□□ -0.34
SNRNP48-201ENST00000342415 CEP120Q8N960 986 aa12.95□□□□□ -0.34
SNRNP48-201ENST00000342415 MECRQ9BV79 373 aa12.95□□□□□ -0.34
SNRNP48-201ENST00000342415 TIPINQ9BVW5 301 aa12.95□□□□□ -0.34
SNRNP48-201ENST00000342415 IRAK4Q9NWZ3 460 aa12.95□□□□□ -0.34
SNRNP48-201ENST00000342415 HOXC10Q9NYD6 342 aa12.95□□□□□ -0.34
SNRNP48-201ENST00000342415 SLC17A7Q9P2U7 560 aa12.95□□□□□ -0.34
SNRNP48-201ENST00000342415 TMEM59LQ9UK28 342 aa12.95□□□□□ -0.34
SNRNP48-201ENST00000342415 NOD1Q9Y239 953 aa12.95□□□□□ -0.34
SNRNP48-201ENST00000342415 CYP1A2P05177 515 aa12.95□□□□□ -0.34
SNRNP48-201ENST00000342415 LAYNQ6UX15 382 aa12.95□□□□□ -0.34
SNRNP48-201ENST00000342415 PDZD4Q76G19 769 aaPredicted RBP12.95□□□□□ -0.34
SNRNP48-201ENST00000342415 TRAPPC12Q8WVT3 735 aa12.95□□□□□ -0.34
SNRNP48-201ENST00000342415 AKT1S1Q96B36 256 aa12.95□□□□□ -0.34
SNRNP48-201ENST00000342415 EPS15L1Q9UBC2 864 aa12.95□□□□□ -0.34
SNRNP48-201ENST00000342415 POLIQ9UNA4 740 aa12.95□□□□□ -0.34
SNRNP48-201ENST00000342415 LMO7Q8WWI1 1683 aa12.95□□□□□ -0.34
SNRNP48-201ENST00000342415 KCPQ6ZWJ8 1503 aa12.95□□□□□ -0.34
SNRNP48-201ENST00000342415 MYH13Q9UKX3 1938 aa12.95□□□□□ -0.34
SNRNP48-201ENST00000342415 SEC24DO94855 1032 aaPredicted RBP12.95□□□□□ -0.34
SNRNP48-201ENST00000342415 HIRAP54198 1017 aaPredicted RBP12.95□□□□□ -0.34
SNRNP48-201ENST00000342415 CRADDP78560 199 aa12.95□□□□□ -0.34
SNRNP48-201ENST00000342415 CNGA3Q16281 694 aa12.95□□□□□ -0.34
SNRNP48-201ENST00000342415 JADE1Q6IE81 842 aa12.95□□□□□ -0.34
SNRNP48-201ENST00000342415 OTOAQ7RTW8 1153 aa12.95□□□□□ -0.34
SNRNP48-201ENST00000342415 SCUBE1Q8IWY4 988 aa12.95□□□□□ -0.34
SNRNP48-201ENST00000342415 ZCCHC9Q8N567 271 aaKnown RBP12.95□□□□□ -0.34
SNRNP48-201ENST00000342415 TRPV6Q9H1D0 765 aa12.95□□□□□ -0.34
SNRNP48-201ENST00000342415 SUDS3Q9H7L9 328 aaPredicted RBP12.95□□□□□ -0.34
SNRNP48-201ENST00000342415 PIM2Q9P1W9 311 aa12.95□□□□□ -0.34
SNRNP48-201ENST00000342415 STXBP5LQ9Y2K9 1186 aa12.95□□□□□ -0.34
SNRNP48-201ENST00000342415 CHD2O14647 1828 aaKnown RBP12.95□□□□□ -0.34
SNRNP48-201ENST00000342415 DCCP43146 1447 aa12.95□□□□□ -0.34
SNRNP48-201ENST00000342415 GMNNO75496 209 aa12.95□□□□□ -0.34
SNRNP48-201ENST00000342415 CYP3A4P08684 503 aa12.95□□□□□ -0.34
SNRNP48-201ENST00000342415 NRLP54845 237 aa12.95□□□□□ -0.34
SNRNP48-201ENST00000342415 PRAMEP78395 509 aa12.95□□□□□ -0.34
SNRNP48-201ENST00000342415 GCNT1Q02742 428 aa12.95□□□□□ -0.34
SNRNP48-201ENST00000342415 CCDC60Q8IWA6 550 aaPredicted RBP12.95□□□□□ -0.34
SNRNP48-201ENST00000342415 PDZD8Q8NEN9 1154 aa12.95□□□□□ -0.34
SNRNP48-201ENST00000342415 RSAD1Q9HA92 442 aa12.95□□□□□ -0.34
SNRNP48-201ENST00000342415 USP18Q9UMW8 372 aa12.95□□□□□ -0.34
SNRNP48-201ENST00000342415 E9PBE3 544 aa12.94□□□□□ -0.34
SNRNP48-201ENST00000342415 KIF3CO14782 793 aa12.94□□□□□ -0.34
SNRNP48-201ENST00000342415 KLHL41O60662 606 aa12.94□□□□□ -0.34
SNRNP48-201ENST00000342415 GARTP22102 1010 aa12.94□□□□□ -0.34
SNRNP48-201ENST00000342415 CACNA2D1P54289 1103 aa12.94□□□□□ -0.34
SNRNP48-201ENST00000342415 TAP1Q03518 808 aa12.94□□□□□ -0.34
SNRNP48-201ENST00000342415 MMRN1Q13201 1228 aa12.94□□□□□ -0.34
SNRNP48-201ENST00000342415 FASTKD1Q53R41 847 aaKnown RBP12.94□□□□□ -0.34
SNRNP48-201ENST00000342415 ATF7IP2Q5U623 682 aa12.94□□□□□ -0.34
SNRNP48-201ENST00000342415 DENND5BQ6ZUT9 1274 aa12.94□□□□□ -0.34
SNRNP48-201ENST00000342415 DPP9Q86TI2 863 aa12.94□□□□□ -0.34
SNRNP48-201ENST00000342415 PXMP2Q9NR77 195 aa12.94□□□□□ -0.34
SNRNP48-201ENST00000342415 BFARQ9NZS9 450 aa12.94□□□□□ -0.34
SNRNP48-201ENST00000342415 DNAJC16Q9Y2G8 782 aa12.94□□□□□ -0.34
SNRNP48-201ENST00000342415 OATP04181 439 aa12.94□□□□□ -0.34
SNRNP48-201ENST00000342415 EEF1B2P24534 225 aaKnown RBP12.94□□□□□ -0.34
SNRNP48-201ENST00000342415 MYBPC2Q14324 1141 aa12.94□□□□□ -0.34
SNRNP48-201ENST00000342415 PRPSAP1Q14558 356 aa12.94□□□□□ -0.34
SNRNP48-201ENST00000342415 TCHHL1Q5QJ38 904 aaPredicted RBP12.94□□□□□ -0.34
SNRNP48-201ENST00000342415 TTC39BQ5VTQ0 682 aaPredicted RBP12.94□□□□□ -0.34
SNRNP48-201ENST00000342415 TDRD10Q5VZ19 366 aaKnown RBP12.94□□□□□ -0.34
SNRNP48-201ENST00000342415 POLNQ7Z5Q5 900 aa12.94□□□□□ -0.34
SNRNP48-201ENST00000342415 MAP4K3Q8IVH8 894 aa12.94□□□□□ -0.34
SNRNP48-201ENST00000342415 KCTD17Q8N5Z5 321 aa12.94□□□□□ -0.34
SNRNP48-201ENST00000342415 LPAR1Q92633 364 aa12.94□□□□□ -0.34
SNRNP48-201ENST00000342415 LENG9Q96B70 501 aa12.94□□□□□ -0.34
SNRNP48-201ENST00000342415 OTUD5Q96G74 571 aa12.94□□□□□ -0.34
SNRNP48-201ENST00000342415 SRPK1Q96SB4 655 aaKnown RBP12.94□□□□□ -0.34
SNRNP48-201ENST00000342415 SERPINI1Q99574 410 aa12.94□□□□□ -0.34
SNRNP48-201ENST00000342415 DEFB129Q9H1M3 183 aa12.94□□□□□ -0.34
SNRNP48-201ENST00000342415 SRRM3A6NNA2 597 aaPredicted RBP12.94□□□□□ -0.34
SNRNP48-201ENST00000342415 CXCL8P10145 99 aa12.94□□□□□ -0.34
SNRNP48-201ENST00000342415 CHRNB2P17787 502 aa12.94□□□□□ -0.34
SNRNP48-201ENST00000342415 GLRBP48167 497 aa12.94□□□□□ -0.34
SNRNP48-201ENST00000342415 DEUP1Q05D60 604 aa12.94□□□□□ -0.34
SNRNP48-201ENST00000342415 HSP90AA5PQ58FG0 334 aa12.94□□□□□ -0.34
SNRNP48-201ENST00000342415 SH3BP5LQ7L8J4 393 aa12.94□□□□□ -0.34
SNRNP48-201ENST00000342415 MYLK4Q86YV6 388 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms