RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 COL16A1Q07092 1604 aaPredicted RBP13.13□□□□□ -0.31
LMX1A-202ENST00000342310 A0A087WZ62 844 aa13.13□□□□□ -0.31
LMX1A-202ENST00000342310 KBTBD13C9JR72 458 aa13.13□□□□□ -0.31
LMX1A-202ENST00000342310 H3BRJ5 948 aa13.13□□□□□ -0.31
LMX1A-202ENST00000342310 DNALI1O14645 258 aaPredicted RBP13.13□□□□□ -0.31
LMX1A-202ENST00000342310 LDHAP00338 332 aaKnown RBP13.13□□□□□ -0.31
LMX1A-202ENST00000342310 GARTP22102 1010 aa13.13□□□□□ -0.31
LMX1A-202ENST00000342310 MIPP30301 263 aa13.13□□□□□ -0.31
LMX1A-202ENST00000342310 GMPRP36959 345 aa13.13□□□□□ -0.31
LMX1A-202ENST00000342310 FAAP100Q0VG06 881 aa13.13□□□□□ -0.31
LMX1A-202ENST00000342310 LAMTOR4Q0VGL1 99 aa13.13□□□□□ -0.31
LMX1A-202ENST00000342310 ZC3H12AQ5D1E8 599 aaKnown RBP13.13□□□□□ -0.31
LMX1A-202ENST00000342310 YTHDF3Q7Z739 585 aaKnown RBP13.13□□□□□ -0.31
LMX1A-202ENST00000342310 TTC7BQ86TV6 843 aa13.13□□□□□ -0.31
LMX1A-202ENST00000342310 ATP11CQ8NB49 1132 aa13.13□□□□□ -0.31
LMX1A-202ENST00000342310 NDRG1Q92597 394 aaKnown RBP13.13□□□□□ -0.31
LMX1A-202ENST00000342310 CD101Q93033 1021 aa13.13□□□□□ -0.31
LMX1A-202ENST00000342310 FDXACB1Q9BRP7 624 aaPredicted RBP13.13□□□□□ -0.31
LMX1A-202ENST00000342310 TRIM55Q9BYV6 548 aa13.13□□□□□ -0.31
LMX1A-202ENST00000342310 PDGFCQ9NRA1 345 aa13.13□□□□□ -0.31
LMX1A-202ENST00000342310 PSMC3IPQ9P2W1 217 aaPredicted RBP13.13□□□□□ -0.31
LMX1A-202ENST00000342310 CYB561D2O14569 222 aa13.13□□□□□ -0.31
LMX1A-202ENST00000342310 C4BPAP04003 597 aaKnown RBP13.13□□□□□ -0.31
LMX1A-202ENST00000342310 ZNF286BP0CG31 522 aa13.13□□□□□ -0.31
LMX1A-202ENST00000342310 NCF2P19878 526 aaPredicted RBP13.13□□□□□ -0.31
LMX1A-202ENST00000342310 NME3Q13232 169 aa13.13□□□□□ -0.31
LMX1A-202ENST00000342310 C16orf46Q6P387 395 aa13.13□□□□□ -0.31
LMX1A-202ENST00000342310 MON1BQ7L1V2 547 aa13.13□□□□□ -0.31
LMX1A-202ENST00000342310 EXD1Q8NHP7 514 aa13.13□□□□□ -0.31
LMX1A-202ENST00000342310 OLIG1Q8TAK6 271 aa13.13□□□□□ -0.31
LMX1A-202ENST00000342310 TRPM4Q8TD43 1214 aa13.13□□□□□ -0.31
LMX1A-202ENST00000342310 KIF12Q96FN5 646 aa13.13□□□□□ -0.31
LMX1A-202ENST00000342310 TSSK1BQ9BXA7 367 aa13.13□□□□□ -0.31
LMX1A-202ENST00000342310 TXLNGQ9NUQ3 528 aa13.13□□□□□ -0.31
LMX1A-202ENST00000342310 DONSONQ9NYP3 566 aa13.13□□□□□ -0.31
LMX1A-202ENST00000342310 SLC17A6Q9P2U8 582 aa13.13□□□□□ -0.31
LMX1A-202ENST00000342310 AFG3L2Q9Y4W6 797 aa13.13□□□□□ -0.31
LMX1A-202ENST00000342310 GOLGA8TH3BQL2 631 aa13.13□□□□□ -0.31
LMX1A-202ENST00000342310 GRIN3BO60391 1043 aa13.13□□□□□ -0.31
LMX1A-202ENST00000342310 USP12O75317 370 aa13.13□□□□□ -0.31
LMX1A-202ENST00000342310 HAUS5O94927 633 aa13.13□□□□□ -0.31
LMX1A-202ENST00000342310 IL1R2P27930 398 aa13.13□□□□□ -0.31
LMX1A-202ENST00000342310 ATXN1P54253 815 aaKnown RBP13.13□□□□□ -0.31
LMX1A-202ENST00000342310 ROR1Q01973 937 aa13.13□□□□□ -0.31
LMX1A-202ENST00000342310 KIZQ2M2Z5 673 aa13.13□□□□□ -0.31
LMX1A-202ENST00000342310 POU5F2Q8N7G0 328 aa13.13□□□□□ -0.31
LMX1A-202ENST00000342310 RFWD2Q8NHY2 731 aa13.13□□□□□ -0.31
LMX1A-202ENST00000342310 SEPT1Q8WYJ6 367 aa13.13□□□□□ -0.31
LMX1A-202ENST00000342310 H0YCG3 227 aa13.12□□□□□ -0.31
LMX1A-202ENST00000342310 SLC26A4O43511 780 aa13.12□□□□□ -0.31
LMX1A-202ENST00000342310 HCRTO43612 131 aa13.12□□□□□ -0.31
LMX1A-202ENST00000342310 RPL22P35268 128 aaKnown RBP13.12□□□□□ -0.31
LMX1A-202ENST00000342310 VCPP55072 806 aaKnown RBP13.12□□□□□ -0.31
LMX1A-202ENST00000342310 PSMD6Q15008 389 aa13.12□□□□□ -0.31
LMX1A-202ENST00000342310 GPRASP2Q96D09 838 aa13.12□□□□□ -0.31
LMX1A-202ENST00000342310 HESX1Q9UBX0 185 aa13.12□□□□□ -0.31
LMX1A-202ENST00000342310 ZC3H7BQ9UGR2 993 aaKnown RBP13.12□□□□□ -0.31
LMX1A-202ENST00000342310 USH1CQ9Y6N9 552 aa13.12□□□□□ -0.31
LMX1A-202ENST00000342310 FAM237BA0A1B0GVD1 139 aa13.12□□□□□ -0.31
LMX1A-202ENST00000342310 ZBTB48P10074 688 aaPredicted RBP13.12□□□□□ -0.31
LMX1A-202ENST00000342310 CENPCQ03188 943 aa13.12□□□□□ -0.31
LMX1A-202ENST00000342310 ADAM32Q8TC27 787 aa13.12□□□□□ -0.31
LMX1A-202ENST00000342310 RXFP2Q8WXD0 754 aa13.12□□□□□ -0.31
LMX1A-202ENST00000342310 ZNF75CPQ92670 426 aaPredicted RBP13.12□□□□□ -0.31
LMX1A-202ENST00000342310 RAB3IPQ96QF0 476 aaPredicted RBP13.12□□□□□ -0.31
LMX1A-202ENST00000342310 VPS11Q9H270 941 aa13.12□□□□□ -0.31
LMX1A-202ENST00000342310 STRCQ7RTU9 1775 aa13.12□□□□□ -0.31
LMX1A-202ENST00000342310 CITO14578 2027 aa13.12□□□□□ -0.31
LMX1A-202ENST00000342310 MEI4A8MW99 385 aa13.12□□□□□ -0.31
LMX1A-202ENST00000342310 ITIH4Q14624 930 aa13.12□□□□□ -0.31
LMX1A-202ENST00000342310 POLNQ7Z5Q5 900 aa13.12□□□□□ -0.31
LMX1A-202ENST00000342310 PIWIL1Q96J94 861 aaKnown RBP13.12□□□□□ -0.31
LMX1A-202ENST00000342310 MAGEB18Q96M61 343 aa13.12□□□□□ -0.31
LMX1A-202ENST00000342310 CGRRF1Q99675 332 aa13.12□□□□□ -0.31
LMX1A-202ENST00000342310 MCM8Q9UJA3 840 aa13.12□□□□□ -0.31
LMX1A-202ENST00000342310 ZMYND8Q9ULU4 1186 aaPredicted RBP13.12□□□□□ -0.31
LMX1A-202ENST00000342310 USP18Q9UMW8 372 aa13.12□□□□□ -0.31
LMX1A-202ENST00000342310 E5RJQ4 531 aa13.11□□□□□ -0.31
LMX1A-202ENST00000342310 MYL2P10916 166 aa13.11□□□□□ -0.31
LMX1A-202ENST00000342310 DESP17661 470 aa13.11□□□□□ -0.31
LMX1A-202ENST00000342310 GEMIN4P57678 1058 aaKnown RBP13.11□□□□□ -0.31
LMX1A-202ENST00000342310 CAV1Q03135 178 aa13.11□□□□□ -0.31
LMX1A-202ENST00000342310 THEMIS2Q5TEJ8 643 aa13.11□□□□□ -0.31
LMX1A-202ENST00000342310 PIGWQ7Z7B1 504 aa13.11□□□□□ -0.31
LMX1A-202ENST00000342310 FAM131BQ86XD5 332 aa13.11□□□□□ -0.31
LMX1A-202ENST00000342310 EIF1ADQ8N9N8 165 aaKnown RBP13.11□□□□□ -0.31
LMX1A-202ENST00000342310 RNF34Q969K3 372 aa13.11□□□□□ -0.31
LMX1A-202ENST00000342310 TWNKQ96RR1 684 aa13.11□□□□□ -0.31
LMX1A-202ENST00000342310 MANSC1Q9H8J5 431 aa13.11□□□□□ -0.31
LMX1A-202ENST00000342310 RXFP1Q9HBX9 757 aa13.11□□□□□ -0.31
LMX1A-202ENST00000342310 NENFQ9UMX5 172 aa13.11□□□□□ -0.31
LMX1A-202ENST00000342310 ARAP2Q8WZ64 1704 aa13.11□□□□□ -0.31
LMX1A-202ENST00000342310 ADAMTSL1Q8N6G6 1762 aa13.11□□□□□ -0.31
LMX1A-202ENST00000342310 A6NJR5 290 aa13.11□□□□□ -0.31
LMX1A-202ENST00000342310 PSTPIP1O43586 416 aa13.11□□□□□ -0.31
LMX1A-202ENST00000342310 UGT1A9O60656 530 aa13.11□□□□□ -0.31
LMX1A-202ENST00000342310 ATP4AP20648 1035 aa13.11□□□□□ -0.31
LMX1A-202ENST00000342310 AP1B1Q10567 949 aa13.11□□□□□ -0.31
LMX1A-202ENST00000342310 MYBPC2Q14324 1141 aa13.11□□□□□ -0.31
LMX1A-202ENST00000342310 CFAP157Q5JU67 520 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms