RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 TBC1D4O60343 1298 aa11.04□□□□□ -0.64
TPM3-207ENST00000341372 KIF20AO95235 890 aa11.04□□□□□ -0.64
TPM3-207ENST00000341372 CELA3AP09093 270 aa11.04□□□□□ -0.64
TPM3-207ENST00000341372 IL9P15248 144 aa11.04□□□□□ -0.64
TPM3-207ENST00000341372 KLRC2P26717 231 aa11.04□□□□□ -0.64
TPM3-207ENST00000341372 SOX5P35711 763 aa11.04□□□□□ -0.64
TPM3-207ENST00000341372 UBE2HP62256 183 aa11.04□□□□□ -0.64
TPM3-207ENST00000341372 LMNB2Q03252 620 aa11.04□□□□□ -0.64
TPM3-207ENST00000341372 SURF1Q15526 300 aa11.04□□□□□ -0.64
TPM3-207ENST00000341372 ZRSR2Q15696 482 aaKnown RBP11.04□□□□□ -0.64
TPM3-207ENST00000341372 SNRNP35Q16560 246 aaKnown RBP11.04□□□□□ -0.64
TPM3-207ENST00000341372 LILRA6Q6PI73 481 aa11.04□□□□□ -0.64
TPM3-207ENST00000341372 FERD3LQ96RJ6 166 aa11.04□□□□□ -0.64
TPM3-207ENST00000341372 RHOBTB2Q9BYZ6 727 aa11.04□□□□□ -0.64
TPM3-207ENST00000341372 PDE11AQ9HCR9 933 aa11.04□□□□□ -0.64
TPM3-207ENST00000341372 RMND1Q9NWS8 449 aa11.04□□□□□ -0.64
TPM3-207ENST00000341372 TRAF3IP3Q9Y228 551 aa11.04□□□□□ -0.64
TPM3-207ENST00000341372 NUB1Q9Y5A7 615 aa11.04□□□□□ -0.64
TPM3-207ENST00000341372 BDP1A6H8Y1 2624 aa11.04□□□□□ -0.64
TPM3-207ENST00000341372 C2orf16Q68DN1 1984 aa11.04□□□□□ -0.64
TPM3-207ENST00000341372 I3L4J1 428 aa11.04□□□□□ -0.64
TPM3-207ENST00000341372 CLIC2O15247 247 aa11.04□□□□□ -0.64
TPM3-207ENST00000341372 GLUD1P00367 558 aa11.04□□□□□ -0.64
TPM3-207ENST00000341372 CD53P19397 219 aa11.04□□□□□ -0.64
TPM3-207ENST00000341372 NEK2P51955 445 aa11.04□□□□□ -0.64
TPM3-207ENST00000341372 ITIH3Q06033 890 aa11.04□□□□□ -0.64
TPM3-207ENST00000341372 ZCWPW2Q504Y3 356 aa11.04□□□□□ -0.64
TPM3-207ENST00000341372 VARS2Q5ST30 1063 aaKnown RBP11.04□□□□□ -0.64
TPM3-207ENST00000341372 MRM1Q6IN84 353 aaKnown RBP11.04□□□□□ -0.64
TPM3-207ENST00000341372 CEP57Q86XR8 500 aa11.04□□□□□ -0.64
TPM3-207ENST00000341372 C1orf127Q8N9H9 656 aa11.04□□□□□ -0.64
TPM3-207ENST00000341372 CMASQ8NFW8 434 aaPredicted RBP11.04□□□□□ -0.64
TPM3-207ENST00000341372 GPT2Q8TD30 523 aa11.04□□□□□ -0.64
TPM3-207ENST00000341372 COL25A1Q9BXS0 654 aaPredicted RBP11.04□□□□□ -0.64
TPM3-207ENST00000341372 SFXN1Q9H9B4 322 aa11.04□□□□□ -0.64
TPM3-207ENST00000341372 LATS2Q9NRM7 1088 aa11.04□□□□□ -0.64
TPM3-207ENST00000341372 DPP3Q9NY33 737 aa11.04□□□□□ -0.64
TPM3-207ENST00000341372 HOOK1Q9UJC3 728 aaKnown RBP11.04□□□□□ -0.64
TPM3-207ENST00000341372 USP15Q9Y4E8 981 aaPredicted RBP11.04□□□□□ -0.64
TPM3-207ENST00000341372 PTPRJQ12913 1337 aa11.03□□□□□ -0.64
TPM3-207ENST00000341372 TGM5O43548 720 aa11.03□□□□□ -0.64
TPM3-207ENST00000341372 KINO60870 393 aaKnown RBP11.03□□□□□ -0.64
TPM3-207ENST00000341372 SMC2O95347 1197 aa11.03□□□□□ -0.64
TPM3-207ENST00000341372 FAM153BP0C7A2 387 aa11.03□□□□□ -0.64
TPM3-207ENST00000341372 RPL17P18621 184 aaKnown RBP11.03□□□□□ -0.64
TPM3-207ENST00000341372 TYMPP19971 482 aa11.03□□□□□ -0.64
TPM3-207ENST00000341372 LILRA4P59901 499 aa11.03□□□□□ -0.64
TPM3-207ENST00000341372 CYP24A1Q07973 514 aa11.03□□□□□ -0.64
TPM3-207ENST00000341372 PSMD6Q15008 389 aa11.03□□□□□ -0.64
TPM3-207ENST00000341372 CLUL1Q15846 466 aa11.03□□□□□ -0.64
TPM3-207ENST00000341372 SLC8B1Q6J4K2 584 aa11.03□□□□□ -0.64
TPM3-207ENST00000341372 WDR49Q8IV35 697 aa11.03□□□□□ -0.64
TPM3-207ENST00000341372 MFSD14AQ96MC6 490 aa11.03□□□□□ -0.64
TPM3-207ENST00000341372 GTPBP4Q9BZE4 634 aaKnown RBP11.03□□□□□ -0.64
TPM3-207ENST00000341372 ADAM7Q9H2U9 754 aa11.03□□□□□ -0.64
TPM3-207ENST00000341372 INTS13Q9NVM9 706 aa11.03□□□□□ -0.64
TPM3-207ENST00000341372 DPP7Q9UHL4 492 aa11.03□□□□□ -0.64
TPM3-207ENST00000341372 FBXW11Q9UKB1 542 aa11.03□□□□□ -0.64
TPM3-207ENST00000341372 ITGA11Q9UKX5 1188 aa11.03□□□□□ -0.64
TPM3-207ENST00000341372 PCDHA5Q9Y5H7 936 aa11.03□□□□□ -0.64
TPM3-207ENST00000341372 ADAM12O43184 909 aa11.02□□□□□ -0.64
TPM3-207ENST00000341372 CYP11A1P05108 521 aa11.02□□□□□ -0.64
TPM3-207ENST00000341372 TFE3P19532 575 aaPredicted RBP11.02□□□□□ -0.64
TPM3-207ENST00000341372 CYP2J2P51589 502 aa11.02□□□□□ -0.64
TPM3-207ENST00000341372 ZNF658Q5TYW1 1059 aaPredicted RBP11.02□□□□□ -0.64
TPM3-207ENST00000341372 RSPO2Q6UXX9 243 aaPredicted RBP11.02□□□□□ -0.64
TPM3-207ENST00000341372 APPL2Q8NEU8 664 aa11.02□□□□□ -0.64
TPM3-207ENST00000341372 ATL2Q8NHH9 583 aa11.02□□□□□ -0.64
TPM3-207ENST00000341372 CACTINQ8WUQ7 758 aaKnown RBP11.02□□□□□ -0.64
TPM3-207ENST00000341372 SMARCE1Q969G3 411 aa11.02□□□□□ -0.64
TPM3-207ENST00000341372 BORCS6Q96GS4 357 aa11.02□□□□□ -0.64
TPM3-207ENST00000341372 CGRRF1Q99675 332 aa11.02□□□□□ -0.64
TPM3-207ENST00000341372 SMAD5Q99717 465 aaKnown RBP11.02□□□□□ -0.64
TPM3-207ENST00000341372 OXCT2Q9BYC2 517 aaPredicted RBP11.02□□□□□ -0.64
TPM3-207ENST00000341372 PLEKHA4Q9H4M7 779 aa11.02□□□□□ -0.64
TPM3-207ENST00000341372 MAN1C1Q9NR34 630 aa11.02□□□□□ -0.64
TPM3-207ENST00000341372 SIX4Q9UIU6 781 aa11.02□□□□□ -0.64
TPM3-207ENST00000341372 FCF1Q9Y324 198 aaKnown RBP11.02□□□□□ -0.64
TPM3-207ENST00000341372 H7C4K7 107 aa11.02□□□□□ -0.65
TPM3-207ENST00000341372 MAPK13O15264 365 aa11.02□□□□□ -0.65
TPM3-207ENST00000341372 CALUO43852 315 aaPredicted RBP11.02□□□□□ -0.65
TPM3-207ENST00000341372 OAZ2O95190 189 aa11.02□□□□□ -0.65
TPM3-207ENST00000341372 NR3C1P04150 777 aa11.02□□□□□ -0.65
TPM3-207ENST00000341372 PNPLA4P41247 253 aa11.02□□□□□ -0.65
TPM3-207ENST00000341372 TAF6P49848 677 aa11.02□□□□□ -0.65
TPM3-207ENST00000341372 TFAMQ00059 246 aaKnown RBP11.02□□□□□ -0.65
TPM3-207ENST00000341372 ZNF280DQ6N043 979 aa11.02□□□□□ -0.65
TPM3-207ENST00000341372 ELMSAN1Q6PJG2 1045 aa11.02□□□□□ -0.65
TPM3-207ENST00000341372 CYP26C1Q6V0L0 522 aa11.02□□□□□ -0.65
TPM3-207ENST00000341372 C15orf39Q6ZRI6 1047 aa11.02□□□□□ -0.65
TPM3-207ENST00000341372 LRRC52Q8N7C0 313 aa11.02□□□□□ -0.65
TPM3-207ENST00000341372 SENP8Q96LD8 212 aa11.02□□□□□ -0.65
TPM3-207ENST00000341372 ZNF560Q96MR9 790 aa11.02□□□□□ -0.65
TPM3-207ENST00000341372 UHRF1Q96T88 793 aaPredicted RBP11.02□□□□□ -0.65
TPM3-207ENST00000341372 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.02□□□□□ -0.65
TPM3-207ENST00000341372 MTMR12Q9C0I1 747 aa11.02□□□□□ -0.65
TPM3-207ENST00000341372 PPM1HQ9ULR3 514 aa11.02□□□□□ -0.65
TPM3-207ENST00000341372 KCNMB2Q9Y691 235 aa11.02□□□□□ -0.65
TPM3-207ENST00000341372 ARHGEF37A1IGU5 675 aa11.01□□□□□ -0.65
TPM3-207ENST00000341372 TGFBR3LH3BV60 316 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms