RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 CXCL10P02778 98 aa22.34■■□□□ 1.17
VRK2-201ENST00000340157 CYP2C18P33260 490 aa22.34■■□□□ 1.17
VRK2-201ENST00000340157 CLCN6P51797 869 aa22.34■■□□□ 1.17
VRK2-201ENST00000340157 CDR1P51861 262 aa22.34■■□□□ 1.17
VRK2-201ENST00000340157 VSNL1P62760 191 aa22.34■■□□□ 1.17
VRK2-201ENST00000340157 COLGALT2Q8IYK4 626 aa22.34■■□□□ 1.17
VRK2-201ENST00000340157 ZDHHC14Q8IZN3 488 aa22.34■■□□□ 1.17
VRK2-201ENST00000340157 STK32AQ8WU08 396 aa22.34■■□□□ 1.17
VRK2-201ENST00000340157 ELAC1Q9H777 363 aaKnown RBP22.34■■□□□ 1.17
VRK2-201ENST00000340157 FNDC1Q4ZHG4 1894 aaPredicted RBP22.34■■□□□ 1.17
VRK2-201ENST00000340157 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.34■■□□□ 1.17
VRK2-201ENST00000340157 DCDC2CA8MYV0 355 aa22.34■■□□□ 1.17
VRK2-201ENST00000340157 LHX1P48742 406 aa22.34■■□□□ 1.17
VRK2-201ENST00000340157 RPL34P49207 117 aaKnown RBP22.34■■□□□ 1.17
VRK2-201ENST00000340157 DCLRE1AQ6PJP8 1040 aa22.34■■□□□ 1.17
VRK2-201ENST00000340157 OLFML1Q6UWY5 402 aa22.34■■□□□ 1.17
VRK2-201ENST00000340157 ARFGAP1Q8N6T3 406 aa22.34■■□□□ 1.17
VRK2-201ENST00000340157 FNIP1Q8TF40 1166 aa22.34■■□□□ 1.17
VRK2-201ENST00000340157 RSPH1Q8WYR4 309 aa22.34■■□□□ 1.17
VRK2-201ENST00000340157 DMGDHQ9UI17 866 aaKnown RBP22.34■■□□□ 1.17
VRK2-201ENST00000340157 KRIT1O00522 736 aa22.33■■□□□ 1.17
VRK2-201ENST00000340157 PAPSS1O43252 624 aaPredicted RBP22.33■■□□□ 1.17
VRK2-201ENST00000340157 PSTPIP1O43586 416 aa22.33■■□□□ 1.17
VRK2-201ENST00000340157 CYP11A1P05108 521 aa22.33■■□□□ 1.17
VRK2-201ENST00000340157 ODC1P11926 461 aa22.33■■□□□ 1.17
VRK2-201ENST00000340157 GATMP50440 423 aa22.33■■□□□ 1.17
VRK2-201ENST00000340157 PIGHQ14442 188 aaPredicted RBP22.33■■□□□ 1.17
VRK2-201ENST00000340157 LONRF2Q1L5Z9 754 aa22.33■■□□□ 1.17
VRK2-201ENST00000340157 MDH1BQ5I0G3 518 aa22.33■■□□□ 1.17
VRK2-201ENST00000340157 FAM102AQ5T9C2 384 aaPredicted RBP22.33■■□□□ 1.17
VRK2-201ENST00000340157 OR6B2Q6IFH4 312 aa22.33■■□□□ 1.17
VRK2-201ENST00000340157 ADAT2Q7Z6V5 191 aaKnown RBP22.33■■□□□ 1.17
VRK2-201ENST00000340157 APBB2Q92870 758 aa22.33■■□□□ 1.17
VRK2-201ENST00000340157 KHSRPQ92945 711 aaKnown RBP eCLIP22.33■■□□□ 1.171e-6■■■□□ 18
VRK2-201ENST00000340157 VWCEQ96DN2 955 aa22.33■■□□□ 1.17
VRK2-201ENST00000340157 KRT12Q99456 494 aa22.33■■□□□ 1.17
VRK2-201ENST00000340157 SYT15Q9BQS2 421 aa22.33■■□□□ 1.17
VRK2-201ENST00000340157 B3GNT5Q9BYG0 378 aa22.33■■□□□ 1.17
VRK2-201ENST00000340157 DNAJB4Q9UDY4 337 aa22.33■■□□□ 1.17
VRK2-201ENST00000340157 TBX21Q9UL17 535 aa22.33■■□□□ 1.17
VRK2-201ENST00000340157 VWA8A3KMH1 1905 aa22.33■■□□□ 1.17
VRK2-201ENST00000340157 PTPRDP23468 1912 aa22.33■■□□□ 1.17
VRK2-201ENST00000340157 NLRC5Q86WI3 1866 aa22.33■■□□□ 1.17
VRK2-201ENST00000340157 TCRBV7S2A1N4TA0A589 114 aa22.32■■□□□ 1.16
VRK2-201ENST00000340157 TARSL2A2RTX5 802 aaKnown RBP22.32■■□□□ 1.16
VRK2-201ENST00000340157 MYBPHLA2RUH7 354 aa22.32■■□□□ 1.16
VRK2-201ENST00000340157 BEST1O76090 585 aa22.32■■□□□ 1.16
VRK2-201ENST00000340157 GJA8P48165 433 aa22.32■■□□□ 1.16
VRK2-201ENST00000340157 CC2D1AQ6P1N0 951 aaPredicted RBP22.32■■□□□ 1.16
VRK2-201ENST00000340157 RHOT1Q8IXI2 618 aa22.32■■□□□ 1.16
VRK2-201ENST00000340157 URGCPQ8TCY9 931 aa22.32■■□□□ 1.16
VRK2-201ENST00000340157 SUSD3Q96L08 255 aa22.32■■□□□ 1.16
VRK2-201ENST00000340157 PSMA2P25787 234 aa22.32■■□□□ 1.16
VRK2-201ENST00000340157 SLC7A5Q01650 507 aa22.32■■□□□ 1.16
VRK2-201ENST00000340157 TAF5Q15542 800 aa22.32■■□□□ 1.16
VRK2-201ENST00000340157 SEL1L2Q5TEA6 688 aa22.32■■□□□ 1.16
VRK2-201ENST00000340157 TXNRD3NBQ6F5E7 133 aa22.32■■□□□ 1.16
VRK2-201ENST00000340157 SCUBE3Q8IX30 993 aa22.32■■□□□ 1.16
VRK2-201ENST00000340157 KLHL7Q8IXQ5 586 aa22.32■■□□□ 1.16
VRK2-201ENST00000340157 CASD1Q96PB1 797 aa22.32■■□□□ 1.16
VRK2-201ENST00000340157 HERPUD2Q9BSE4 406 aa22.32■■□□□ 1.16
VRK2-201ENST00000340157 DDX47Q9H0S4 455 aaKnown RBP22.32■■□□□ 1.16
VRK2-201ENST00000340157 LCMT1Q9UIC8 334 aa22.32■■□□□ 1.16
VRK2-201ENST00000340157 ZMYND10O75800 440 aa22.31■■□□□ 1.16
VRK2-201ENST00000340157 PLA2G4AP47712 749 aa22.31■■□□□ 1.16
VRK2-201ENST00000340157 LBX1P52954 281 aa22.31■■□□□ 1.16
VRK2-201ENST00000340157 ATP13A4Q4VNC1 1196 aa22.31■■□□□ 1.16
VRK2-201ENST00000340157 WDR93Q6P2C0 686 aa22.31■■□□□ 1.16
VRK2-201ENST00000340157 ANKS1BQ7Z6G8 1248 aa22.31■■□□□ 1.16
VRK2-201ENST00000340157 SLC13A5Q86YT5 568 aaPredicted RBP22.31■■□□□ 1.16
VRK2-201ENST00000340157 HINFPQ9BQA5 517 aa22.31■■□□□ 1.16
VRK2-201ENST00000340157 DUSP16Q9BY84 665 aa22.31■■□□□ 1.16
VRK2-201ENST00000340157 DNAI2Q9GZS0 605 aa22.31■■□□□ 1.16
VRK2-201ENST00000340157 CDH9Q9ULB4 789 aa22.31■■□□□ 1.16
VRK2-201ENST00000340157 PCDHB7Q9Y5E2 793 aa22.31■■□□□ 1.16
VRK2-201ENST00000340157 FLT3P36888 993 aa22.3■■□□□ 1.16
VRK2-201ENST00000340157 PLCB3Q01970 1234 aa22.3■■□□□ 1.16
VRK2-201ENST00000340157 LLGL1Q15334 1064 aa22.3■■□□□ 1.16
VRK2-201ENST00000340157 SIX1Q15475 284 aaPredicted RBP22.3■■□□□ 1.16
VRK2-201ENST00000340157 C8orf74Q6P047 294 aa22.3■■□□□ 1.16
VRK2-201ENST00000340157 KATNAL2Q8IYT4 538 aa22.3■■□□□ 1.16
VRK2-201ENST00000340157 CLEC4CQ8WTT0 213 aa22.3■■□□□ 1.16
VRK2-201ENST00000340157 PCED1BQ96HM7 432 aa22.3■■□□□ 1.16
VRK2-201ENST00000340157 MIS12Q9H081 205 aa22.3■■□□□ 1.16
VRK2-201ENST00000340157 TMEM30AQ9NV96 361 aa22.3■■□□□ 1.16
VRK2-201ENST00000340157 ZNF446Q9NWS9 450 aa22.3■■□□□ 1.16
VRK2-201ENST00000340157 KANSL3Q9P2N6 904 aa22.3■■□□□ 1.16
VRK2-201ENST00000340157 ATP11BQ9Y2G3 1177 aa22.3■■□□□ 1.16
VRK2-201ENST00000340157 C2CD4BA6NLJ0 364 aa22.3■■□□□ 1.16
VRK2-201ENST00000340157 CCDC188H7C350 402 aa22.3■■□□□ 1.16
VRK2-201ENST00000340157 XPO1O14980 1071 aaKnown RBP22.3■■□□□ 1.16
VRK2-201ENST00000340157 RAD51CO43502 376 aa22.3■■□□□ 1.16
VRK2-201ENST00000340157 LRCH4O75427 683 aa22.3■■□□□ 1.16
VRK2-201ENST00000340157 GRAP2O75791 330 aa22.3■■□□□ 1.16
VRK2-201ENST00000340157 SLC6A3Q01959 620 aa22.3■■□□□ 1.16
VRK2-201ENST00000340157 CLEC20AQ6ZU45 233 aa22.3■■□□□ 1.16
VRK2-201ENST00000340157 DEFB128Q7Z7B8 93 aa22.3■■□□□ 1.16
VRK2-201ENST00000340157 PIGZQ86VD9 579 aa22.3■■□□□ 1.16
VRK2-201ENST00000340157 OR10T2Q8NGX3 314 aa22.3■■□□□ 1.16
VRK2-201ENST00000340157 SPATA18Q8TC71 538 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms