RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 USP1O94782 785 aa13.18□□□□□ -0.3
DFFB-202ENST00000339350 FBXO21O94952 628 aa13.18□□□□□ -0.3
DFFB-202ENST00000339350 BAG2O95816 211 aa13.18□□□□□ -0.3
DFFB-202ENST00000339350 BMP3P12645 472 aa13.18□□□□□ -0.3
DFFB-202ENST00000339350 KPNA1P52294 538 aaPredicted RBP13.18□□□□□ -0.3
DFFB-202ENST00000339350 YARSP54577 528 aaKnown RBP13.18□□□□□ -0.3
DFFB-202ENST00000339350 KRT17Q04695 432 aa13.18□□□□□ -0.3
DFFB-202ENST00000339350 LRRC36Q1X8D7 754 aa13.18□□□□□ -0.3
DFFB-202ENST00000339350 ABCB5Q2M3G0 1257 aa13.18□□□□□ -0.3
DFFB-202ENST00000339350 ACAD11Q709F0 780 aa13.18□□□□□ -0.3
DFFB-202ENST00000339350 RHOT2Q8IXI1 618 aa13.18□□□□□ -0.3
DFFB-202ENST00000339350 SCYL3Q8IZE3 742 aa13.18□□□□□ -0.3
DFFB-202ENST00000339350 ZNF564Q8TBZ8 553 aaPredicted RBP13.18□□□□□ -0.3
DFFB-202ENST00000339350 MRRFQ96E11 262 aaKnown RBP13.18□□□□□ -0.3
DFFB-202ENST00000339350 PRICKLE1Q96MT3 831 aaPredicted RBP13.18□□□□□ -0.3
DFFB-202ENST00000339350 HEMGNQ9BXL5 484 aa13.18□□□□□ -0.3
DFFB-202ENST00000339350 CHST7Q9NS84 486 aa13.18□□□□□ -0.3
DFFB-202ENST00000339350 PRR12Q9ULL5 1215 aa13.18□□□□□ -0.3
DFFB-202ENST00000339350 H0YIN7 160 aa13.17□□□□□ -0.3
DFFB-202ENST00000339350 EIF3DO15371 548 aaKnown RBP eCLIP13.17□□□□□ -0.3
DFFB-202ENST00000339350 CYP3A4P08684 503 aa13.17□□□□□ -0.3
DFFB-202ENST00000339350 CHRNB2P17787 502 aa13.17□□□□□ -0.3
DFFB-202ENST00000339350 AMPD1P23109 780 aa13.17□□□□□ -0.3
DFFB-202ENST00000339350 ANXA13P27216 316 aa13.17□□□□□ -0.3
DFFB-202ENST00000339350 CALCOCO2Q13137 446 aa13.17□□□□□ -0.3
DFFB-202ENST00000339350 C16orf72Q14CZ0 275 aa13.17□□□□□ -0.3
DFFB-202ENST00000339350 ANKDD1AQ495B1 522 aa13.17□□□□□ -0.3
DFFB-202ENST00000339350 MOXD1Q6UVY6 613 aa13.17□□□□□ -0.3
DFFB-202ENST00000339350 SLC13A5Q86YT5 568 aaPredicted RBP13.17□□□□□ -0.3
DFFB-202ENST00000339350 DAW1Q8N136 415 aa13.17□□□□□ -0.3
DFFB-202ENST00000339350 ZFP28Q8NHY6 868 aa13.17□□□□□ -0.3
DFFB-202ENST00000339350 TTC1Q99614 292 aa13.17□□□□□ -0.3
DFFB-202ENST00000339350 TLE6Q9H808 572 aa13.17□□□□□ -0.3
DFFB-202ENST00000339350 GPRC5CQ9NQ84 441 aa13.17□□□□□ -0.3
DFFB-202ENST00000339350 COQ6Q9Y2Z9 468 aa13.17□□□□□ -0.3
DFFB-202ENST00000339350 ARHGEF35A5YM69 484 aa13.17□□□□□ -0.3
DFFB-202ENST00000339350 CTNNA2P26232 953 aa13.17□□□□□ -0.3
DFFB-202ENST00000339350 TUBA1BP68363 451 aa13.17□□□□□ -0.3
DFFB-202ENST00000339350 NADK2Q4G0N4 442 aa13.17□□□□□ -0.3
DFFB-202ENST00000339350 TUBA1AQ71U36 451 aa13.17□□□□□ -0.3
DFFB-202ENST00000339350 VPS37AQ8NEZ2 397 aa13.17□□□□□ -0.3
DFFB-202ENST00000339350 GFM2Q969S9 779 aaKnown RBP13.17□□□□□ -0.3
DFFB-202ENST00000339350 HERPUD2Q9BSE4 406 aa13.17□□□□□ -0.3
DFFB-202ENST00000339350 ZNF577Q9BSK1 485 aa13.17□□□□□ -0.3
DFFB-202ENST00000339350 FHDC1Q9C0D6 1143 aaPredicted RBP13.17□□□□□ -0.3
DFFB-202ENST00000339350 EPB41L1Q9H4G0 881 aa13.17□□□□□ -0.3
DFFB-202ENST00000339350 TOPORSQ9NS56 1045 aaPredicted RBP13.17□□□□□ -0.3
DFFB-202ENST00000339350 TELO2Q9Y4R8 837 aa13.17□□□□□ -0.3
DFFB-202ENST00000339350 SCN9AQ15858 1988 aa13.16□□□□□ -0.3
DFFB-202ENST00000339350 TRAFD1O14545 582 aaPredicted RBP13.16□□□□□ -0.3
DFFB-202ENST00000339350 PSMD10O75832 226 aa13.16□□□□□ -0.3
DFFB-202ENST00000339350 CYP1A2P05177 515 aa13.16□□□□□ -0.3
DFFB-202ENST00000339350 FOSL1P15407 271 aa13.16□□□□□ -0.3
DFFB-202ENST00000339350 SLC5A2P31639 672 aa13.16□□□□□ -0.3
DFFB-202ENST00000339350 STT3AP46977 705 aa13.16□□□□□ -0.3
DFFB-202ENST00000339350 VAMP7P51809 220 aa13.16□□□□□ -0.3
DFFB-202ENST00000339350 CRY1Q16526 586 aa13.16□□□□□ -0.3
DFFB-202ENST00000339350 PPP2R2DQ66LE6 453 aa13.16□□□□□ -0.3
DFFB-202ENST00000339350 SNRNP48Q6IEG0 339 aaKnown RBP13.16□□□□□ -0.3
DFFB-202ENST00000339350 ZNF280CQ8ND82 737 aa13.16□□□□□ -0.3
DFFB-202ENST00000339350 CFAP61Q8NHU2 1237 aa13.16□□□□□ -0.3
DFFB-202ENST00000339350 CCDC17Q96LX7 622 aa13.16□□□□□ -0.3
DFFB-202ENST00000339350 NEURL2Q9BR09 285 aa13.16□□□□□ -0.3
DFFB-202ENST00000339350 KIFC3Q9BVG8 833 aa13.16□□□□□ -0.3
DFFB-202ENST00000339350 STMN4Q9H169 189 aaPredicted RBP13.16□□□□□ -0.3
DFFB-202ENST00000339350 AAASQ9NRG9 546 aa13.16□□□□□ -0.3
DFFB-202ENST00000339350 TRNAU1APQ9NX07 287 aaKnown RBP13.16□□□□□ -0.3
DFFB-202ENST00000339350 PPP1R1BQ9UD71 204 aaPredicted RBP13.16□□□□□ -0.3
DFFB-202ENST00000339350 ARIH1Q9Y4X5 557 aaPredicted RBP13.16□□□□□ -0.3
DFFB-202ENST00000339350 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.16□□□□□ -0.3
DFFB-202ENST00000339350 ANKRD31Q8N7Z5 1873 aa13.16□□□□□ -0.3
DFFB-202ENST00000339350 CFAP69A5D8W1 941 aa13.16□□□□□ -0.3
DFFB-202ENST00000339350 TRMUO75648 421 aaKnown RBP13.16□□□□□ -0.3
DFFB-202ENST00000339350 ACADVLP49748 655 aa13.16□□□□□ -0.3
DFFB-202ENST00000339350 PRELPP51888 382 aa13.16□□□□□ -0.3
DFFB-202ENST00000339350 MED21Q13503 144 aa13.16□□□□□ -0.3
DFFB-202ENST00000339350 ADRM1Q16186 407 aa13.16□□□□□ -0.3
DFFB-202ENST00000339350 GRAMD2AQ8IUY3 354 aa13.16□□□□□ -0.3
DFFB-202ENST00000339350 ACER1Q8TDN7 264 aa13.16□□□□□ -0.3
DFFB-202ENST00000339350 EPS8L1Q8TE68 723 aa13.16□□□□□ -0.3
DFFB-202ENST00000339350 MCUR1Q96AQ8 359 aa13.16□□□□□ -0.3
DFFB-202ENST00000339350 VMP1Q96GC9 406 aa13.16□□□□□ -0.3
DFFB-202ENST00000339350 GRIP2Q9C0E4 1043 aa13.16□□□□□ -0.3
DFFB-202ENST00000339350 DMAC2Q9NW81 257 aa13.16□□□□□ -0.3
DFFB-202ENST00000339350 NYAP2Q9P242 653 aa13.16□□□□□ -0.3
DFFB-202ENST00000339350 PCYOX1Q9UHG3 505 aa13.16□□□□□ -0.3
DFFB-202ENST00000339350 ANGPTL2Q9UKU9 493 aa13.16□□□□□ -0.3
DFFB-202ENST00000339350 CLEC11AQ9Y240 323 aa13.16□□□□□ -0.3
DFFB-202ENST00000339350 GOLGA8TH3BQL2 631 aa13.15□□□□□ -0.3
DFFB-202ENST00000339350 FOSP01100 380 aaPredicted RBP13.15□□□□□ -0.3
DFFB-202ENST00000339350 CETPP11597 493 aa13.15□□□□□ -0.3
DFFB-202ENST00000339350 RARGP13631 454 aa13.15□□□□□ -0.3
DFFB-202ENST00000339350 FOXN2P32314 431 aa13.15□□□□□ -0.3
DFFB-202ENST00000339350 SPIDRQ14159 915 aa13.15□□□□□ -0.3
DFFB-202ENST00000339350 MYLK3Q32MK0 819 aa13.15□□□□□ -0.3
DFFB-202ENST00000339350 SGO2Q562F6 1265 aa13.15□□□□□ -0.3
DFFB-202ENST00000339350 DACT2Q5SW24 774 aa13.15□□□□□ -0.3
DFFB-202ENST00000339350 SRRM1Q8IYB3 904 aaKnown RBP13.15□□□□□ -0.3
DFFB-202ENST00000339350 ESX1Q8N693 406 aa13.15□□□□□ -0.3
DFFB-202ENST00000339350 METTL25Q8N6Q8 603 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms