RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 GPR15P49685 360 aa12.04□□□□□ -0.48
SLC28A1-202ENST00000338602 PFKPQ01813 784 aa12.04□□□□□ -0.48
SLC28A1-202ENST00000338602 KCNH2Q12809 1159 aa12.04□□□□□ -0.48
SLC28A1-202ENST00000338602 GPR158Q5T848 1215 aa12.04□□□□□ -0.48
SLC28A1-202ENST00000338602 SDHAF4Q5VUM1 108 aa12.04□□□□□ -0.48
SLC28A1-202ENST00000338602 DENND5BQ6ZUT9 1274 aa12.04□□□□□ -0.48
SLC28A1-202ENST00000338602 BMP8AQ7Z5Y6 402 aa12.04□□□□□ -0.48
SLC28A1-202ENST00000338602 TRIM59Q8IWR1 403 aa12.04□□□□□ -0.48
SLC28A1-202ENST00000338602 SUGP1Q8IWZ8 645 aaKnown RBP12.04□□□□□ -0.48
SLC28A1-202ENST00000338602 ZSCAN18Q8TBC5 510 aaPredicted RBP12.04□□□□□ -0.48
SLC28A1-202ENST00000338602 SEMA4DQ92854 862 aa12.04□□□□□ -0.48
SLC28A1-202ENST00000338602 FGF14Q92915 247 aa12.04□□□□□ -0.48
SLC28A1-202ENST00000338602 PBXIP1Q96AQ6 731 aa12.04□□□□□ -0.48
SLC28A1-202ENST00000338602 TRMT2BQ96GJ1 504 aaKnown RBP12.04□□□□□ -0.48
SLC28A1-202ENST00000338602 SMARCD1Q96GM5 515 aa12.04□□□□□ -0.48
SLC28A1-202ENST00000338602 C8orf48Q96LL4 319 aa12.04□□□□□ -0.48
SLC28A1-202ENST00000338602 ASB16Q96NS5 453 aa12.04□□□□□ -0.48
SLC28A1-202ENST00000338602 NT5C1BQ96P26 610 aa12.04□□□□□ -0.48
SLC28A1-202ENST00000338602 B3GNT5Q9BYG0 378 aa12.04□□□□□ -0.48
SLC28A1-202ENST00000338602 MFSD1Q9H3U5 465 aa12.04□□□□□ -0.48
SLC28A1-202ENST00000338602 TASP1Q9H6P5 420 aa12.04□□□□□ -0.48
SLC28A1-202ENST00000338602 ZNF334Q9HCZ1 680 aaPredicted RBP12.04□□□□□ -0.48
SLC28A1-202ENST00000338602 DOCK6Q96HP0 2047 aa12.03□□□□□ -0.48
SLC28A1-202ENST00000338602 CILPO75339 1184 aa12.03□□□□□ -0.48
SLC28A1-202ENST00000338602 MOSPD3O75425 235 aa12.03□□□□□ -0.48
SLC28A1-202ENST00000338602 RTN3O95197 1032 aaPredicted RBP12.03□□□□□ -0.48
SLC28A1-202ENST00000338602 PRKCSHP14314 528 aaPredicted RBP12.03□□□□□ -0.48
SLC28A1-202ENST00000338602 HMGA1P17096 107 aaKnown RBP12.03□□□□□ -0.48
SLC28A1-202ENST00000338602 PTMSP20962 102 aa12.03□□□□□ -0.48
SLC28A1-202ENST00000338602 RFX1P22670 979 aa12.03□□□□□ -0.48
SLC28A1-202ENST00000338602 MTIF2P46199 727 aaKnown RBP12.03□□□□□ -0.48
SLC28A1-202ENST00000338602 PPP3CCP48454 512 aa12.03□□□□□ -0.48
SLC28A1-202ENST00000338602 PDE6CP51160 858 aa12.03□□□□□ -0.48
SLC28A1-202ENST00000338602 CUL2Q13617 745 aa12.03□□□□□ -0.48
SLC28A1-202ENST00000338602 CCDC142Q17RM4 750 aa12.03□□□□□ -0.48
SLC28A1-202ENST00000338602 DPCR1Q3MIW9 517 aa12.03□□□□□ -0.48
SLC28A1-202ENST00000338602 FAM78AQ5JUQ0 283 aa12.03□□□□□ -0.48
SLC28A1-202ENST00000338602 CCDC183Q5T5S1 534 aa12.03□□□□□ -0.48
SLC28A1-202ENST00000338602 GAREM2Q75VX8 874 aa12.03□□□□□ -0.48
SLC28A1-202ENST00000338602 FAM35AQ86V20 835 aa12.03□□□□□ -0.48
SLC28A1-202ENST00000338602 YAF2Q8IY57 180 aa12.03□□□□□ -0.48
SLC28A1-202ENST00000338602 DEPDC1BQ8WUY9 529 aa12.03□□□□□ -0.48
SLC28A1-202ENST00000338602 CNOT6LQ96LI5 555 aaKnown RBP12.03□□□□□ -0.48
SLC28A1-202ENST00000338602 MYRFLQ96LU7 910 aa12.03□□□□□ -0.48
SLC28A1-202ENST00000338602 KXD1Q9BQD3 176 aa12.03□□□□□ -0.48
SLC28A1-202ENST00000338602 ZNF518BQ9C0D4 1074 aa12.03□□□□□ -0.48
SLC28A1-202ENST00000338602 THAP9Q9H5L6 903 aa12.03□□□□□ -0.48
SLC28A1-202ENST00000338602 TRPV4Q9HBA0 871 aa12.03□□□□□ -0.48
SLC28A1-202ENST00000338602 DMAP1Q9NPF5 467 aaPredicted RBP12.03□□□□□ -0.48
SLC28A1-202ENST00000338602 CISHQ9NSE2 258 aa12.03□□□□□ -0.48
SLC28A1-202ENST00000338602 WNT16Q9UBV4 365 aa12.03□□□□□ -0.48
SLC28A1-202ENST00000338602 NME7Q9Y5B8 376 aa12.03□□□□□ -0.48
SLC28A1-202ENST00000338602 WDFY4Q6ZS81 3184 aa12.02□□□□□ -0.48
SLC28A1-202ENST00000338602 DOCK8Q8NF50 2099 aa12.02□□□□□ -0.48
SLC28A1-202ENST00000338602 F8VP50 259 aa12.02□□□□□ -0.49
SLC28A1-202ENST00000338602 CLDN5O00501 218 aa12.02□□□□□ -0.49
SLC28A1-202ENST00000338602 AP1G2O75843 785 aa12.02□□□□□ -0.49
SLC28A1-202ENST00000338602 F11P03951 625 aa12.02□□□□□ -0.49
SLC28A1-202ENST00000338602 CFHP08603 1231 aa12.02□□□□□ -0.49
SLC28A1-202ENST00000338602 FAM200BP0CF97 657 aa12.02□□□□□ -0.49
SLC28A1-202ENST00000338602 WEE1P30291 646 aa12.02□□□□□ -0.49
SLC28A1-202ENST00000338602 AVPR1AP37288 418 aa12.02□□□□□ -0.49
SLC28A1-202ENST00000338602 SLC8A3P57103 927 aa12.02□□□□□ -0.49
SLC28A1-202ENST00000338602 LRMPQ12912 555 aa12.02□□□□□ -0.49
SLC28A1-202ENST00000338602 TANGO2Q6ICL3 276 aa12.02□□□□□ -0.49
SLC28A1-202ENST00000338602 NUP93Q8N1F7 819 aa12.02□□□□□ -0.49
SLC28A1-202ENST00000338602 SLC2A14Q8TDB8 520 aa12.02□□□□□ -0.49
SLC28A1-202ENST00000338602 TATDN2Q93075 761 aa12.02□□□□□ -0.49
SLC28A1-202ENST00000338602 CYFIP2Q96F07 1278 aa12.02□□□□□ -0.49
SLC28A1-202ENST00000338602 TMEM176AQ96HP8 235 aa12.02□□□□□ -0.49
SLC28A1-202ENST00000338602 SHDQ96IW2 340 aa12.02□□□□□ -0.49
SLC28A1-202ENST00000338602 FAM81BQ96LP2 452 aa12.02□□□□□ -0.49
SLC28A1-202ENST00000338602 HEXIM2Q96MH2 286 aaKnown RBP12.02□□□□□ -0.49
SLC28A1-202ENST00000338602 SLITRK1Q96PX8 696 aa12.02□□□□□ -0.49
SLC28A1-202ENST00000338602 TRMT61BQ9BVS5 477 aaKnown RBP12.02□□□□□ -0.49
SLC28A1-202ENST00000338602 IL21Q9HBE4 155 aa12.02□□□□□ -0.49
SLC28A1-202ENST00000338602 SLC2A4RGQ9NR83 387 aa12.02□□□□□ -0.49
SLC28A1-202ENST00000338602 ANO10Q9NW15 660 aa12.02□□□□□ -0.49
SLC28A1-202ENST00000338602 COMMD8Q9NX08 183 aa12.02□□□□□ -0.49
SLC28A1-202ENST00000338602 TRPM5Q9NZQ8 1165 aa12.02□□□□□ -0.49
SLC28A1-202ENST00000338602 NOTCH4Q99466 2003 aa12.02□□□□□ -0.49
SLC28A1-202ENST00000338602 STK25O00506 426 aa12.01□□□□□ -0.49
SLC28A1-202ENST00000338602 NARSO43776 548 aaKnown RBP12.01□□□□□ -0.49
SLC28A1-202ENST00000338602 CCDC130P13994 396 aa12.01□□□□□ -0.49
SLC28A1-202ENST00000338602 PSMC3P17980 439 aa12.01□□□□□ -0.49
SLC28A1-202ENST00000338602 YWHAQP27348 245 aa12.01□□□□□ -0.49
SLC28A1-202ENST00000338602 CYP4F8P98187 520 aa12.01□□□□□ -0.49
SLC28A1-202ENST00000338602 ORC1Q13415 861 aa12.01□□□□□ -0.49
SLC28A1-202ENST00000338602 ZNF394Q53GI3 561 aa12.01□□□□□ -0.49
SLC28A1-202ENST00000338602 RBM43Q6ZSC3 357 aaKnown RBP12.01□□□□□ -0.49
SLC28A1-202ENST00000338602 MON1AQ86VX9 555 aa12.01□□□□□ -0.49
SLC28A1-202ENST00000338602 ARID3BQ8IVW6 561 aaPredicted RBP12.01□□□□□ -0.49
SLC28A1-202ENST00000338602 MFSD6LQ8IWD5 586 aa12.01□□□□□ -0.49
SLC28A1-202ENST00000338602 FUKQ8N0W3 1084 aa12.01□□□□□ -0.49
SLC28A1-202ENST00000338602 PPM1KQ8N3J5 372 aa12.01□□□□□ -0.49
SLC28A1-202ENST00000338602 C12orf29Q8N999 325 aa12.01□□□□□ -0.49
SLC28A1-202ENST00000338602 EHBP1Q8NDI1 1231 aa12.01□□□□□ -0.49
SLC28A1-202ENST00000338602 PDZD8Q8NEN9 1154 aa12.01□□□□□ -0.49
SLC28A1-202ENST00000338602 ST13P5Q8NFI4 369 aaPredicted RBP12.01□□□□□ -0.49
SLC28A1-202ENST00000338602 IRF7Q92985 503 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms