RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 NLRP12P59046 1061 aa16.27■□□□□ 0.2
PRKN-201ENST00000338468 CYP27A1Q02318 531 aa16.27■□□□□ 0.2
PRKN-201ENST00000338468 MAPRE1Q15691 268 aaKnown RBP16.27■□□□□ 0.2
PRKN-201ENST00000338468 KLHL10Q6JEL2 608 aa16.27■□□□□ 0.2
PRKN-201ENST00000338468 VITQ6UXI7 678 aa16.27■□□□□ 0.2
PRKN-201ENST00000338468 SCN4BQ8IWT1 228 aa16.27■□□□□ 0.2
PRKN-201ENST00000338468 DTWD2Q8NBA8 298 aa16.27■□□□□ 0.2
PRKN-201ENST00000338468 MYRFLQ96LU7 910 aa16.27■□□□□ 0.2
PRKN-201ENST00000338468 B3GNT5Q9BYG0 378 aa16.27■□□□□ 0.2
PRKN-201ENST00000338468 ZNF518BQ9C0D4 1074 aa16.27■□□□□ 0.2
PRKN-201ENST00000338468 GPR88Q9GZN0 384 aa16.27■□□□□ 0.2
PRKN-201ENST00000338468 ZFP14Q9HCL3 533 aa16.27■□□□□ 0.2
PRKN-201ENST00000338468 KIAA1468Q9P260 1216 aa16.27■□□□□ 0.2
PRKN-201ENST00000338468 DENND4CQ5VZ89 1909 aa16.27■□□□□ 0.19
PRKN-201ENST00000338468 OBSL1O75147 1896 aa16.27■□□□□ 0.19
PRKN-201ENST00000338468 GREB1Q4ZG55 1949 aa16.26■□□□□ 0.19
PRKN-201ENST00000338468 CLDN5O00501 218 aa16.26■□□□□ 0.19
PRKN-201ENST00000338468 PI15O43692 258 aa16.26■□□□□ 0.19
PRKN-201ENST00000338468 CSH1P0DML2 217 aa16.26■□□□□ 0.19
PRKN-201ENST00000338468 CSH2P0DML3 217 aa16.26■□□□□ 0.19
PRKN-201ENST00000338468 CDC25CP30307 473 aa16.26■□□□□ 0.19
PRKN-201ENST00000338468 PPP1R2P41236 205 aa16.26■□□□□ 0.19
PRKN-201ENST00000338468 NOP14P78316 857 aaKnown RBP16.26■□□□□ 0.19
PRKN-201ENST00000338468 ORC1Q13415 861 aa16.26■□□□□ 0.19
PRKN-201ENST00000338468 STIM1Q13586 685 aa16.26■□□□□ 0.19
PRKN-201ENST00000338468 CBWD6Q4V339 395 aa16.26■□□□□ 0.19
PRKN-201ENST00000338468 CBWD3Q5JTY5 395 aa16.26■□□□□ 0.19
PRKN-201ENST00000338468 CBWD5Q5RIA9 395 aa16.26■□□□□ 0.19
PRKN-201ENST00000338468 GPR158Q5T848 1215 aa16.26■□□□□ 0.19
PRKN-201ENST00000338468 KRT39Q6A163 491 aa16.26■□□□□ 0.19
PRKN-201ENST00000338468 FOXR2Q6PJQ5 311 aa16.26■□□□□ 0.19
PRKN-201ENST00000338468 VSTM1Q6UX27 236 aa16.26■□□□□ 0.19
PRKN-201ENST00000338468 PAQR9Q6ZVX9 377 aa16.26■□□□□ 0.19
PRKN-201ENST00000338468 GPIHBP1Q8IV16 184 aa16.26■□□□□ 0.19
PRKN-201ENST00000338468 ARID3BQ8IVW6 561 aaPredicted RBP16.26■□□□□ 0.19
PRKN-201ENST00000338468 NELFBQ8WX92 580 aa16.26■□□□□ 0.19
PRKN-201ENST00000338468 SLC35C1Q96A29 364 aa16.26■□□□□ 0.19
PRKN-201ENST00000338468 TRMT2BQ96GJ1 504 aaKnown RBP16.26■□□□□ 0.19
PRKN-201ENST00000338468 SPATA17Q96L03 361 aa16.26■□□□□ 0.19
PRKN-201ENST00000338468 LRRC3BQ96PB8 259 aa16.26■□□□□ 0.19
PRKN-201ENST00000338468 SLC46A2Q9BY10 475 aa16.26■□□□□ 0.19
PRKN-201ENST00000338468 SLITRK6Q9H5Y7 841 aa16.26■□□□□ 0.19
PRKN-201ENST00000338468 TASP1Q9H6P5 420 aa16.26■□□□□ 0.19
PRKN-201ENST00000338468 MAGED2Q9UNF1 606 aaPredicted RBP16.26■□□□□ 0.19
PRKN-201ENST00000338468 CTNND2Q9UQB3 1225 aa16.26■□□□□ 0.19
PRKN-201ENST00000338468 COL4A2P08572 1712 aa16.25■□□□□ 0.19
PRKN-201ENST00000338468 NUP210Q8TEM1 1887 aaPredicted RBP16.25■□□□□ 0.19
PRKN-201ENST00000338468 CLSTN1O94985 981 aa16.25■□□□□ 0.19
PRKN-201ENST00000338468 P4HA1P13674 534 aa16.25■□□□□ 0.19
PRKN-201ENST00000338468 WEE1P30291 646 aa16.25■□□□□ 0.19
PRKN-201ENST00000338468 MXI1P50539 228 aa16.25■□□□□ 0.19
PRKN-201ENST00000338468 NDST1P52848 882 aa16.25■□□□□ 0.19
PRKN-201ENST00000338468 STX17P56962 302 aa16.25■□□□□ 0.19
PRKN-201ENST00000338468 INCA1Q0VD86 236 aa16.25■□□□□ 0.19
PRKN-201ENST00000338468 GRM2Q14416 872 aa16.25■□□□□ 0.19
PRKN-201ENST00000338468 TAF12Q16514 161 aa16.25■□□□□ 0.19
PRKN-201ENST00000338468 FILIP1Q7Z7B0 1213 aa16.25■□□□□ 0.19
PRKN-201ENST00000338468 TRIML1Q8N9V2 468 aa16.25■□□□□ 0.19
PRKN-201ENST00000338468 CEP63Q96MT8 703 aa16.25■□□□□ 0.19
PRKN-201ENST00000338468 MED15Q96RN5 788 aa16.25■□□□□ 0.19
PRKN-201ENST00000338468 TWNKQ96RR1 684 aa16.25■□□□□ 0.19
PRKN-201ENST00000338468 NIF3L1Q9GZT8 377 aa16.25■□□□□ 0.19
PRKN-201ENST00000338468 CLSTN2Q9H4D0 955 aa16.25■□□□□ 0.19
PRKN-201ENST00000338468 ARHGEF3Q9NR81 526 aa16.25■□□□□ 0.19
PRKN-201ENST00000338468 LMBRD1Q9NUN5 540 aa16.25■□□□□ 0.19
PRKN-201ENST00000338468 ARMCX3Q9UH62 379 aaPredicted RBP16.25■□□□□ 0.19
PRKN-201ENST00000338468 COQ4Q9Y3A0 265 aa16.25■□□□□ 0.19
PRKN-201ENST00000338468 EP300Q09472 2414 aaPredicted RBP16.25■□□□□ 0.19
PRKN-201ENST00000338468 DMXL1Q9Y485 3027 aa16.24■□□□□ 0.19
PRKN-201ENST00000338468 SHISA7A6NL88 538 aa16.24■□□□□ 0.19
PRKN-201ENST00000338468 HEPACAM2A8MVW5 462 aa16.24■□□□□ 0.19
PRKN-201ENST00000338468 F8VP50 259 aa16.24■□□□□ 0.19
PRKN-201ENST00000338468 PRAMEF12O95522 483 aa16.24■□□□□ 0.19
PRKN-201ENST00000338468 RFX1P22670 979 aa16.24■□□□□ 0.19
PRKN-201ENST00000338468 GRIK1P39086 918 aa16.24■□□□□ 0.19
PRKN-201ENST00000338468 USP46P62068 366 aa16.24■□□□□ 0.19
PRKN-201ENST00000338468 DCAF17Q5H9S7 520 aaPredicted RBP16.24■□□□□ 0.19
PRKN-201ENST00000338468 ACOT1Q86TX2 421 aa16.24■□□□□ 0.19
PRKN-201ENST00000338468 FUKQ8N0W3 1084 aa16.24■□□□□ 0.19
PRKN-201ENST00000338468 CRYBG2Q8N1P7 616 aa16.24■□□□□ 0.19
PRKN-201ENST00000338468 FBXL13Q8NEE6 735 aa16.24■□□□□ 0.19
PRKN-201ENST00000338468 WHAMMQ8TF30 809 aa16.24■□□□□ 0.19
PRKN-201ENST00000338468 C8orf48Q96LL4 319 aa16.24■□□□□ 0.19
PRKN-201ENST00000338468 ELOVL4Q9GZR5 314 aa16.24■□□□□ 0.19
PRKN-201ENST00000338468 SEMA4AQ9H3S1 761 aa16.24■□□□□ 0.19
PRKN-201ENST00000338468 RAB20Q9NX57 234 aa16.24■□□□□ 0.19
PRKN-201ENST00000338468 ARNTLO00327 626 aa16.23■□□□□ 0.19
PRKN-201ENST00000338468 STX10O60499 249 aa16.23■□□□□ 0.19
PRKN-201ENST00000338468 LMNAP02545 664 aaKnown RBP16.23■□□□□ 0.19
PRKN-201ENST00000338468 PSMC3P17980 439 aa16.23■□□□□ 0.19
PRKN-201ENST00000338468 PAK1Q13153 545 aa16.23■□□□□ 0.19
PRKN-201ENST00000338468 SLC44A4Q53GD3 710 aa16.23■□□□□ 0.19
PRKN-201ENST00000338468 ARHGAP15Q53QZ3 475 aa16.23■□□□□ 0.19
PRKN-201ENST00000338468 TCERG1LQ5VWI1 586 aa16.23■□□□□ 0.19
PRKN-201ENST00000338468 TXNDC8Q6A555 127 aa16.23■□□□□ 0.19
PRKN-201ENST00000338468 FAM35AQ86V20 835 aa16.23■□□□□ 0.19
PRKN-201ENST00000338468 UNC93AQ86WB7 457 aa16.23■□□□□ 0.19
PRKN-201ENST00000338468 MFSD6LQ8IWD5 586 aa16.23■□□□□ 0.19
PRKN-201ENST00000338468 C12orf29Q8N999 325 aa16.23■□□□□ 0.19
PRKN-201ENST00000338468 TATDN2Q93075 761 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms