RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 UNC45AQ9H3U1 944 aa13.8□□□□□ -0.2
COL2A1-201ENST00000337299 DNPEPQ9ULA0 475 aa13.8□□□□□ -0.2
COL2A1-201ENST00000337299 R3HDM2Q9Y2K5 976 aaKnown RBP13.8□□□□□ -0.2
COL2A1-201ENST00000337299 MRPL11Q9Y3B7 192 aaKnown RBP13.8□□□□□ -0.2
COL2A1-201ENST00000337299 NFS1Q9Y697 457 aa13.8□□□□□ -0.2
COL2A1-201ENST00000337299 C2CD2LO14523 706 aa13.8□□□□□ -0.2
COL2A1-201ENST00000337299 CYP11B1P15538 503 aa13.8□□□□□ -0.2
COL2A1-201ENST00000337299 CDK7P50613 346 aa13.8□□□□□ -0.2
COL2A1-201ENST00000337299 C21orf59P57076 290 aa13.8□□□□□ -0.2
COL2A1-201ENST00000337299 NAA20P61599 178 aa13.8□□□□□ -0.2
COL2A1-201ENST00000337299 FAAP100Q0VG06 881 aa13.8□□□□□ -0.2
COL2A1-201ENST00000337299 UBAP2LQ14157 1087 aaKnown RBP13.8□□□□□ -0.2
COL2A1-201ENST00000337299 DGCR14Q96DF8 476 aaKnown RBP13.8□□□□□ -0.2
COL2A1-201ENST00000337299 PCYOX1Q9UHG3 505 aa13.8□□□□□ -0.2
COL2A1-201ENST00000337299 SH3GLB1Q9Y371 365 aa13.8□□□□□ -0.2
COL2A1-201ENST00000337299 ESRRBO95718 433 aa13.8□□□□□ -0.2
COL2A1-201ENST00000337299 EIF2AK2P19525 551 aaKnown RBP13.8□□□□□ -0.2
COL2A1-201ENST00000337299 SYDE2Q5VT97 1194 aa13.8□□□□□ -0.2
COL2A1-201ENST00000337299 TTC7BQ86TV6 843 aa13.8□□□□□ -0.2
COL2A1-201ENST00000337299 CDR2LQ86X02 465 aaPredicted RBP13.8□□□□□ -0.2
COL2A1-201ENST00000337299 C7orf31Q8N865 590 aa13.8□□□□□ -0.2
COL2A1-201ENST00000337299 SPATA16Q9BXB7 569 aa13.8□□□□□ -0.2
COL2A1-201ENST00000337299 SEL1LQ9UBV2 794 aa13.8□□□□□ -0.2
COL2A1-201ENST00000337299 IGSF9BQ9UPX0 1349 aa13.8□□□□□ -0.2
COL2A1-201ENST00000337299 C15orf38-AP3S2A0A0A6YYH1 394 aa13.79□□□□□ -0.2
COL2A1-201ENST00000337299 ADAMTS3O15072 1205 aa13.79□□□□□ -0.2
COL2A1-201ENST00000337299 LCA5LO95447 670 aa13.79□□□□□ -0.2
COL2A1-201ENST00000337299 TFE3P19532 575 aaPredicted RBP13.79□□□□□ -0.2
COL2A1-201ENST00000337299 TUBP50607 506 aa13.79□□□□□ -0.2
COL2A1-201ENST00000337299 MTTPP55157 894 aa13.79□□□□□ -0.2
COL2A1-201ENST00000337299 TFDP2Q14188 446 aa13.79□□□□□ -0.2
COL2A1-201ENST00000337299 ACAD10Q6JQN1 1059 aa13.79□□□□□ -0.2
COL2A1-201ENST00000337299 ZNF572Q7Z3I7 529 aaPredicted RBP13.79□□□□□ -0.2
COL2A1-201ENST00000337299 ARPINQ7Z6K5 226 aa13.79□□□□□ -0.2
COL2A1-201ENST00000337299 ARHGEF19Q8IW93 802 aa13.79□□□□□ -0.2
COL2A1-201ENST00000337299 DAGLBQ8NCG7 672 aa13.79□□□□□ -0.2
COL2A1-201ENST00000337299 COA1Q9GZY4 146 aa13.79□□□□□ -0.2
COL2A1-201ENST00000337299 SELENONQ9NZV5 590 aa13.79□□□□□ -0.2
COL2A1-201ENST00000337299 SLC17A7Q9P2U7 560 aa13.79□□□□□ -0.2
COL2A1-201ENST00000337299 SLC24A2Q9UI40 661 aa13.79□□□□□ -0.2
COL2A1-201ENST00000337299 CCPG1Q9ULG6 757 aa13.79□□□□□ -0.2
COL2A1-201ENST00000337299 TNNC2P02585 160 aa13.79□□□□□ -0.2
COL2A1-201ENST00000337299 VIL1P09327 827 aaKnown RBP13.79□□□□□ -0.2
COL2A1-201ENST00000337299 RPA1P27694 616 aa13.79□□□□□ -0.2
COL2A1-201ENST00000337299 SMARCA1P28370 1054 aa13.79□□□□□ -0.2
COL2A1-201ENST00000337299 FOLH1Q04609 750 aa13.79□□□□□ -0.2
COL2A1-201ENST00000337299 ITGADQ13349 1161 aa13.79□□□□□ -0.2
COL2A1-201ENST00000337299 AP3B2Q13367 1082 aa13.79□□□□□ -0.2
COL2A1-201ENST00000337299 NEDD8Q15843 81 aa13.79□□□□□ -0.2
COL2A1-201ENST00000337299 SNRNP35Q16560 246 aaKnown RBP13.79□□□□□ -0.2
COL2A1-201ENST00000337299 TTC39BQ5VTQ0 682 aaPredicted RBP13.79□□□□□ -0.2
COL2A1-201ENST00000337299 ITPRIPL1Q6GPH6 555 aa13.79□□□□□ -0.2
COL2A1-201ENST00000337299 C3orf67Q6ZVT6 689 aa13.79□□□□□ -0.2
COL2A1-201ENST00000337299 CCDC80Q76M96 950 aa13.79□□□□□ -0.2
COL2A1-201ENST00000337299 POLNQ7Z5Q5 900 aa13.79□□□□□ -0.2
COL2A1-201ENST00000337299 TRABD2AQ86V40 505 aa13.79□□□□□ -0.2
COL2A1-201ENST00000337299 PALB2Q86YC2 1186 aa13.79□□□□□ -0.2
COL2A1-201ENST00000337299 NUP93Q8N1F7 819 aa13.79□□□□□ -0.2
COL2A1-201ENST00000337299 LRRC57Q8N9N7 239 aa13.79□□□□□ -0.2
COL2A1-201ENST00000337299 MASTLQ96GX5 879 aa13.79□□□□□ -0.2
COL2A1-201ENST00000337299 SRPK1Q96SB4 655 aaKnown RBP13.79□□□□□ -0.2
COL2A1-201ENST00000337299 EBF3Q9H4W6 596 aa13.79□□□□□ -0.2
COL2A1-201ENST00000337299 PCDHA3Q9Y5H8 950 aa13.79□□□□□ -0.2
COL2A1-201ENST00000337299 PALM3A6NDB9 673 aaPredicted RBP13.79□□□□□ -0.2
COL2A1-201ENST00000337299 KRT8P05787 483 aa13.79□□□□□ -0.2
COL2A1-201ENST00000337299 ITGA2BP08514 1039 aa13.79□□□□□ -0.2
COL2A1-201ENST00000337299 KCNA4P22459 653 aa13.79□□□□□ -0.2
COL2A1-201ENST00000337299 PRKCIP41743 596 aa13.79□□□□□ -0.2
COL2A1-201ENST00000337299 GABPAQ06546 454 aa13.79□□□□□ -0.2
COL2A1-201ENST00000337299 CDCA2Q69YH5 1023 aaPredicted RBP13.79□□□□□ -0.2
COL2A1-201ENST00000337299 PPP1R2P3Q6NXS1 205 aa13.79□□□□□ -0.2
COL2A1-201ENST00000337299 RBM15BQ8NDT2 890 aaKnown RBP13.79□□□□□ -0.2
COL2A1-201ENST00000337299 ADPGKQ9BRR6 497 aa13.79□□□□□ -0.2
COL2A1-201ENST00000337299 DHX35Q9H5Z1 703 aaKnown RBP13.79□□□□□ -0.2
COL2A1-201ENST00000337299 PKD2L2Q9NZM6 624 aa13.79□□□□□ -0.2
COL2A1-201ENST00000337299 PRKAG3Q9UGI9 489 aa13.79□□□□□ -0.2
COL2A1-201ENST00000337299 DAPK2Q9UIK4 370 aa13.79□□□□□ -0.2
COL2A1-201ENST00000337299 UBE4BO95155 1302 aa13.79□□□□□ -0.2
COL2A1-201ENST00000337299 RICTORQ6R327 1708 aa13.79□□□□□ -0.2
COL2A1-201ENST00000337299 KRT7P08729 469 aa13.78□□□□□ -0.2
COL2A1-201ENST00000337299 C6orf222P0C671 652 aaPredicted RBP13.78□□□□□ -0.2
COL2A1-201ENST00000337299 ACOT2P49753 483 aa13.78□□□□□ -0.2
COL2A1-201ENST00000337299 NUP107P57740 925 aa13.78□□□□□ -0.2
COL2A1-201ENST00000337299 ZBTB41Q5SVQ8 909 aa13.78□□□□□ -0.2
COL2A1-201ENST00000337299 VSTM1Q6UX27 236 aa13.78□□□□□ -0.2
COL2A1-201ENST00000337299 ETNPPLQ8TBG4 499 aa13.78□□□□□ -0.2
COL2A1-201ENST00000337299 CHURC1Q8WUH1 139 aa13.78□□□□□ -0.2
COL2A1-201ENST00000337299 MMTAG2Q9BU76 263 aaKnown RBP13.78□□□□□ -0.2
COL2A1-201ENST00000337299 MECRQ9BV79 373 aa13.78□□□□□ -0.2
COL2A1-201ENST00000337299 GIMAP4Q9NUV9 329 aa13.78□□□□□ -0.2
COL2A1-201ENST00000337299 SAE1Q9UBE0 346 aaPredicted RBP13.78□□□□□ -0.2
COL2A1-201ENST00000337299 RBAK-RBAKDNI3L0D1 243 aa13.78□□□□□ -0.2
COL2A1-201ENST00000337299 GH2P01242 217 aa13.78□□□□□ -0.2
COL2A1-201ENST00000337299 SERPINB1P30740 379 aa13.78□□□□□ -0.2
COL2A1-201ENST00000337299 IFRD2Q12894 506 aaPredicted RBP13.78□□□□□ -0.2
COL2A1-201ENST00000337299 CCNG2Q16589 344 aa13.78□□□□□ -0.2
COL2A1-201ENST00000337299 C16orf89Q6UX73 402 aa13.78□□□□□ -0.2
COL2A1-201ENST00000337299 RINLQ6ZS11 566 aa13.78□□□□□ -0.2
COL2A1-201ENST00000337299 PTAR1Q7Z6K3 402 aaPredicted RBP13.78□□□□□ -0.2
COL2A1-201ENST00000337299 CERKQ8TCT0 537 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms