RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 TFDP3Q5H9I0 405 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 FAM183BPQ6ZVS7 135 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 CCDC125Q86Z20 511 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 C3orf20Q8ND61 904 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 TMEM40Q8WWA1 233 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 TMEM176AQ96HP8 235 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 FAM81BQ96LP2 452 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 PTPN18Q99952 460 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 OSBPL7Q9BZF2 842 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 WHRNQ9P202 907 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 NAALADL1Q9UQQ1 740 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 TNFSF13BQ9Y275 285 aa9.31□□□□□ -0.92
SNCA-201ENST00000336904 GOLGA6L7A0A1B0GV03 622 aa9.3□□□□□ -0.92
SNCA-201ENST00000336904 DNM1LO00429 736 aa9.3□□□□□ -0.92
SNCA-201ENST00000336904 B4GALT4O60513 344 aa9.3□□□□□ -0.92
SNCA-201ENST00000336904 MMP13P45452 471 aa9.3□□□□□ -0.92
SNCA-201ENST00000336904 MCCD1P59942 119 aaPredicted RBP9.3□□□□□ -0.92
SNCA-201ENST00000336904 SLC25A11Q02978 314 aaKnown RBP9.3□□□□□ -0.92
SNCA-201ENST00000336904 CA9Q16790 459 aa9.3□□□□□ -0.92
SNCA-201ENST00000336904 GOLGA7BQ2TAP0 167 aa9.3□□□□□ -0.92
SNCA-201ENST00000336904 PPP1R15BQ5SWA1 713 aa9.3□□□□□ -0.92
SNCA-201ENST00000336904 ERMARDQ5T6L9 678 aa9.3□□□□□ -0.92
SNCA-201ENST00000336904 VSTM1Q6UX27 236 aa9.3□□□□□ -0.92
SNCA-201ENST00000336904 CATSPER4Q7RTX7 472 aa9.3□□□□□ -0.92
SNCA-201ENST00000336904 GPR142Q7Z601 462 aa9.3□□□□□ -0.92
SNCA-201ENST00000336904 CHMP6Q96FZ7 201 aa9.3□□□□□ -0.92
SNCA-201ENST00000336904 FAM129AQ9BZQ8 928 aa9.3□□□□□ -0.92
SNCA-201ENST00000336904 MROH8Q9H579 483 aa9.3□□□□□ -0.92
SNCA-201ENST00000336904 TRIP12Q14669 1992 aaPredicted RBP9.3□□□□□ -0.92
SNCA-201ENST00000336904 EXOC1LA0A1B0GW35 172 aa9.3□□□□□ -0.92
SNCA-201ENST00000336904 A0A1W2PPM1 405 aa9.3□□□□□ -0.92
SNCA-201ENST00000336904 MEIS3P2A8K0S8 358 aa9.3□□□□□ -0.92
SNCA-201ENST00000336904 CILPO75339 1184 aa9.3□□□□□ -0.92
SNCA-201ENST00000336904 TJP3O95049 919 aa9.3□□□□□ -0.92
SNCA-201ENST00000336904 MAGEA9P43362 315 aa9.3□□□□□ -0.92
SNCA-201ENST00000336904 YARSP54577 528 aaKnown RBP9.3□□□□□ -0.92
SNCA-201ENST00000336904 CDH6P55285 790 aa9.3□□□□□ -0.92
SNCA-201ENST00000336904 CNGA2Q16280 664 aa9.3□□□□□ -0.92
SNCA-201ENST00000336904 ZNF792Q3KQV3 632 aa9.3□□□□□ -0.92
SNCA-201ENST00000336904 BBS9Q3SYG4 887 aa9.3□□□□□ -0.92
SNCA-201ENST00000336904 FNBP1LQ5T0N5 605 aa9.3□□□□□ -0.92
SNCA-201ENST00000336904 C6orf118Q5T5N4 469 aa9.3□□□□□ -0.92
SNCA-201ENST00000336904 PMF1Q6P1K2 205 aa9.3□□□□□ -0.92
SNCA-201ENST00000336904 OR6B3Q8NGW1 331 aa9.3□□□□□ -0.92
SNCA-201ENST00000336904 GRK7Q8WTQ7 553 aa9.3□□□□□ -0.92
SNCA-201ENST00000336904 DNAJB3Q8WWF6 145 aa9.3□□□□□ -0.92
SNCA-201ENST00000336904 RXFP2Q8WXD0 754 aa9.3□□□□□ -0.92
SNCA-201ENST00000336904 ACAP3Q96P50 834 aa9.3□□□□□ -0.92
SNCA-201ENST00000336904 PGLYRP2Q96PD5 576 aa9.3□□□□□ -0.92
SNCA-201ENST00000336904 CEP41Q9BYV8 373 aa9.3□□□□□ -0.92
SNCA-201ENST00000336904 PRMT7Q9NVM4 692 aaPredicted RBP9.3□□□□□ -0.92
SNCA-201ENST00000336904 MFHAS1Q9Y4C4 1052 aa9.3□□□□□ -0.92
SNCA-201ENST00000336904 LOC285556D6RIA3 1793 aa9.29□□□□□ -0.92
SNCA-201ENST00000336904 F7P08709 466 aaPredicted RBP9.29□□□□□ -0.92
SNCA-201ENST00000336904 LCP1P13796 627 aa9.29□□□□□ -0.92
SNCA-201ENST00000336904 PDGFRAP16234 1089 aa9.29□□□□□ -0.92
SNCA-201ENST00000336904 ACAT1P24752 427 aaKnown RBP9.29□□□□□ -0.92
SNCA-201ENST00000336904 LMO2P25791 158 aa9.29□□□□□ -0.92
SNCA-201ENST00000336904 CTCFP49711 727 aaPredicted RBP9.29□□□□□ -0.92
SNCA-201ENST00000336904 YWHAEP62258 255 aaKnown RBP9.29□□□□□ -0.92
SNCA-201ENST00000336904 PKN2Q16513 984 aaKnown RBP9.29□□□□□ -0.92
SNCA-201ENST00000336904 NUGGCQ68CJ6 796 aa9.29□□□□□ -0.92
SNCA-201ENST00000336904 RCOR2Q8IZ40 523 aa9.29□□□□□ -0.92
SNCA-201ENST00000336904 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.29□□□□□ -0.92
SNCA-201ENST00000336904 CCDC89Q8N998 374 aa9.29□□□□□ -0.92
SNCA-201ENST00000336904 CXorf38Q8TB03 319 aa9.29□□□□□ -0.92
SNCA-201ENST00000336904 FBXO41Q8TF61 875 aa9.29□□□□□ -0.92
SNCA-201ENST00000336904 PGM2Q96G03 612 aa9.29□□□□□ -0.92
SNCA-201ENST00000336904 RBM41Q96IZ5 413 aaKnown RBP9.29□□□□□ -0.92
SNCA-201ENST00000336904 FLRT1Q9NZU1 646 aa9.29□□□□□ -0.92
SNCA-201ENST00000336904 ASB14A6NK59 587 aa9.29□□□□□ -0.92
SNCA-201ENST00000336904 C3orf70A6NLC5 250 aaPredicted RBP9.29□□□□□ -0.92
SNCA-201ENST00000336904 RASA4BC9J798 803 aa9.29□□□□□ -0.92
SNCA-201ENST00000336904 RASA4O43374 803 aa9.29□□□□□ -0.92
SNCA-201ENST00000336904 CYP2B6P20813 491 aa9.29□□□□□ -0.92
SNCA-201ENST00000336904 GPD2P43304 727 aa9.29□□□□□ -0.92
SNCA-201ENST00000336904 CLUL1Q15846 466 aa9.29□□□□□ -0.92
SNCA-201ENST00000336904 HIBCHQ6NVY1 386 aaPredicted RBP9.29□□□□□ -0.92
SNCA-201ENST00000336904 TTC30AQ86WT1 665 aa9.29□□□□□ -0.92
SNCA-201ENST00000336904 CACNA2D3Q8IZS8 1091 aa9.29□□□□□ -0.92
SNCA-201ENST00000336904 ALLCQ8N6M5 410 aa9.29□□□□□ -0.92
SNCA-201ENST00000336904 MS4A4AQ96JQ5 239 aa9.29□□□□□ -0.92
SNCA-201ENST00000336904 TRIM6Q9C030 488 aaPredicted RBP9.29□□□□□ -0.92
SNCA-201ENST00000336904 ABCF3Q9NUQ8 709 aa9.29□□□□□ -0.92
SNCA-201ENST00000336904 KCNG1Q9UIX4 513 aa9.29□□□□□ -0.92
SNCA-201ENST00000336904 USP18Q9UMW8 372 aa9.29□□□□□ -0.92
SNCA-201ENST00000336904 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.29□□□□□ -0.92
SNCA-201ENST00000336904 CHMP2BQ9UQN3 213 aa9.29□□□□□ -0.92
SNCA-201ENST00000336904 TMEM63AO94886 807 aa9.29□□□□□ -0.92
SNCA-201ENST00000336904 MMP3P08254 477 aa9.29□□□□□ -0.92
SNCA-201ENST00000336904 KRT15P19012 456 aa9.29□□□□□ -0.92
SNCA-201ENST00000336904 EIF4BP23588 611 aaKnown RBP9.29□□□□□ -0.92
SNCA-201ENST00000336904 KDELR1P24390 212 aa9.29□□□□□ -0.92
SNCA-201ENST00000336904 AFF1P51825 1210 aaKnown RBP9.29□□□□□ -0.92
SNCA-201ENST00000336904 VCPP55072 806 aaKnown RBP9.29□□□□□ -0.92
SNCA-201ENST00000336904 LAMC2Q13753 1193 aa9.29□□□□□ -0.92
SNCA-201ENST00000336904 TTC31Q49AM3 519 aaPredicted RBP9.29□□□□□ -0.92
SNCA-201ENST00000336904 GKAP1Q5VSY0 366 aaPredicted RBP9.29□□□□□ -0.92
SNCA-201ENST00000336904 SPATA18Q8TC71 538 aa9.29□□□□□ -0.92
SNCA-201ENST00000336904 RSAD2Q8WXG1 361 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms