RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 DDR2Q16832 855 aa17.51■□□□□ 0.39
SHOX-201ENST00000334060 PKDCCQ504Y2 493 aa17.51■□□□□ 0.39
SHOX-201ENST00000334060 NAA35Q5VZE5 725 aa17.51■□□□□ 0.39
SHOX-201ENST00000334060 THEM5Q8N1Q8 247 aa17.51■□□□□ 0.39
SHOX-201ENST00000334060 C17orf53Q8N3J3 647 aaPredicted RBP17.51■□□□□ 0.39
SHOX-201ENST00000334060 MRPL43Q8N983 215 aaKnown RBP17.51■□□□□ 0.39
SHOX-201ENST00000334060 SECISBP2LQ93073 1101 aaKnown RBP17.51■□□□□ 0.39
SHOX-201ENST00000334060 PIWIL1Q96J94 861 aaKnown RBP17.51■□□□□ 0.39
SHOX-201ENST00000334060 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.51■□□□□ 0.39
SHOX-201ENST00000334060 PYCARDQ9ULZ3 195 aa17.51■□□□□ 0.39
SHOX-201ENST00000334060 NRG2O14511 850 aaPredicted RBP17.5■□□□□ 0.39
SHOX-201ENST00000334060 ATMINO43313 823 aaPredicted RBP17.5■□□□□ 0.39
SHOX-201ENST00000334060 GJB6O95452 261 aa17.5■□□□□ 0.39
SHOX-201ENST00000334060 TPM1P09493 284 aa17.5■□□□□ 0.39
SHOX-201ENST00000334060 VDRP11473 427 aa17.5■□□□□ 0.39
SHOX-201ENST00000334060 PCSK1P29120 753 aa17.5■□□□□ 0.39
SHOX-201ENST00000334060 MAP3K7CLP57077 242 aa17.5■□□□□ 0.39
SHOX-201ENST00000334060 YWHAEP62258 255 aaKnown RBP17.5■□□□□ 0.39
SHOX-201ENST00000334060 MTMR3Q13615 1198 aa17.5■□□□□ 0.39
SHOX-201ENST00000334060 PMF1Q6P1K2 205 aa17.5■□□□□ 0.39
SHOX-201ENST00000334060 CLEC20AQ6ZU45 233 aa17.5■□□□□ 0.39
SHOX-201ENST00000334060 VN1R2Q8NFZ6 395 aa17.5■□□□□ 0.39
SHOX-201ENST00000334060 SYN2Q92777 582 aaPredicted RBP17.5■□□□□ 0.39
SHOX-201ENST00000334060 MED10Q9BTT4 135 aa17.5■□□□□ 0.39
SHOX-201ENST00000334060 CDH22Q9UJ99 828 aa17.5■□□□□ 0.39
SHOX-201ENST00000334060 RCCD1A6NED2 376 aa17.49■□□□□ 0.39
SHOX-201ENST00000334060 TGM5O43548 720 aa17.49■□□□□ 0.39
SHOX-201ENST00000334060 EPCAMP16422 314 aa17.49■□□□□ 0.39
SHOX-201ENST00000334060 GPD2P43304 727 aa17.49■□□□□ 0.39
SHOX-201ENST00000334060 PGFP49763 221 aa17.49■□□□□ 0.39
SHOX-201ENST00000334060 KIF11P52732 1056 aa17.49■□□□□ 0.39
SHOX-201ENST00000334060 CLEC4CQ8WTT0 213 aa17.49■□□□□ 0.39
SHOX-201ENST00000334060 TNIP3Q96KP6 325 aa17.49■□□□□ 0.39
SHOX-201ENST00000334060 RXFP1Q9HBX9 757 aa17.49■□□□□ 0.39
SHOX-201ENST00000334060 NENFQ9UMX5 172 aa17.49■□□□□ 0.39
SHOX-201ENST00000334060 BACE2Q9Y5Z0 518 aa17.49■□□□□ 0.39
SHOX-201ENST00000334060 F8VP50 259 aa17.49■□□□□ 0.39
SHOX-201ENST00000334060 RB1P06400 928 aa17.49■□□□□ 0.39
SHOX-201ENST00000334060 NDUFV1P49821 464 aa17.49■□□□□ 0.39
SHOX-201ENST00000334060 NOMO3P69849 1222 aa17.49■□□□□ 0.39
SHOX-201ENST00000334060 TSPY1Q01534 308 aa17.49■□□□□ 0.39
SHOX-201ENST00000334060 GPR17Q13304 367 aa17.49■□□□□ 0.39
SHOX-201ENST00000334060 ARHGAP17Q68EM7 881 aa17.49■□□□□ 0.39
SHOX-201ENST00000334060 LCLAT1Q6UWP7 414 aa17.49■□□□□ 0.39
SHOX-201ENST00000334060 CPXM1Q96SM3 734 aa17.49■□□□□ 0.39
SHOX-201ENST00000334060 HNRNPABQ99729 332 aaKnown RBP17.49■□□□□ 0.39
SHOX-201ENST00000334060 LZTS1Q9Y250 596 aa17.49■□□□□ 0.39
SHOX-201ENST00000334060 RWDD3Q9Y3V2 267 aa17.49■□□□□ 0.39
SHOX-201ENST00000334060 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.49■□□□□ 0.39
SHOX-201ENST00000334060 AP1G2O75843 785 aa17.48■□□□□ 0.39
SHOX-201ENST00000334060 ATF6P18850 670 aa17.48■□□□□ 0.39
SHOX-201ENST00000334060 CNGA2Q16280 664 aa17.48■□□□□ 0.39
SHOX-201ENST00000334060 PTPN20Q4JDL3 420 aa17.48■□□□□ 0.39
SHOX-201ENST00000334060 CYP4A22Q5TCH4 519 aa17.48■□□□□ 0.39
SHOX-201ENST00000334060 FAM81BQ96LP2 452 aa17.48■□□□□ 0.39
SHOX-201ENST00000334060 SEPT5Q99719 369 aaPredicted RBP17.48■□□□□ 0.39
SHOX-201ENST00000334060 MYH10P35580 1976 aa17.48■□□□□ 0.39
SHOX-201ENST00000334060 OR6C75A6NL08 312 aa17.48■□□□□ 0.39
SHOX-201ENST00000334060 HHLA1C9JL84 531 aa17.48■□□□□ 0.39
SHOX-201ENST00000334060 LINC01565O15544 149 aa17.48■□□□□ 0.39
SHOX-201ENST00000334060 CYP1A1P04798 512 aaPredicted RBP17.48■□□□□ 0.39
SHOX-201ENST00000334060 UNGP13051 313 aaPredicted RBP17.48■□□□□ 0.39
SHOX-201ENST00000334060 GSDMDP57764 484 aa17.48■□□□□ 0.39
SHOX-201ENST00000334060 USP46P62068 366 aa17.48■□□□□ 0.39
SHOX-201ENST00000334060 ZNF697Q5TEC3 545 aa17.48■□□□□ 0.39
SHOX-201ENST00000334060 SCN4BQ8IWT1 228 aa17.48■□□□□ 0.39
SHOX-201ENST00000334060 SCAMP5Q8TAC9 235 aa17.48■□□□□ 0.39
SHOX-201ENST00000334060 GIPC2Q8TF65 315 aa17.48■□□□□ 0.39
SHOX-201ENST00000334060 IQCDQ96DY2 449 aa17.48■□□□□ 0.39
SHOX-201ENST00000334060 TRIM10Q9UDY6 481 aa17.48■□□□□ 0.39
SHOX-201ENST00000334060 DOCK6Q96HP0 2047 aa17.47■□□□□ 0.39
SHOX-201ENST00000334060 H7C4K7 107 aa17.47■□□□□ 0.39
SHOX-201ENST00000334060 CLASP2O75122 1294 aaKnown RBP17.47■□□□□ 0.39
SHOX-201ENST00000334060 RFPL2O75678 378 aa17.47■□□□□ 0.39
SHOX-201ENST00000334060 ABLIM3O94929 683 aa17.47■□□□□ 0.39
SHOX-201ENST00000334060 FAM163BP0C2L3 166 aa17.47■□□□□ 0.39
SHOX-201ENST00000334060 DMTNQ08495 405 aa17.47■□□□□ 0.39
SHOX-201ENST00000334060 IFRD2Q12894 506 aaPredicted RBP17.47■□□□□ 0.39
SHOX-201ENST00000334060 MAPK8IP2Q13387 824 aaPredicted RBP17.47■□□□□ 0.39
SHOX-201ENST00000334060 SMC1AQ14683 1233 aaKnown RBP17.47■□□□□ 0.39
SHOX-201ENST00000334060 CLEC16AQ2KHT3 1053 aa17.47■□□□□ 0.39
SHOX-201ENST00000334060 SPATA2LQ8IUW3 424 aaPredicted RBP17.47■□□□□ 0.39
SHOX-201ENST00000334060 DAAM1Q9Y4D1 1078 aa17.47■□□□□ 0.39
SHOX-201ENST00000334060 ERBB2P04626 1255 aa17.46■□□□□ 0.39
SHOX-201ENST00000334060 TNFAIP3P21580 790 aa17.46■□□□□ 0.39
SHOX-201ENST00000334060 PAX3P23760 479 aa17.46■□□□□ 0.39
SHOX-201ENST00000334060 KLRC2P26717 231 aa17.46■□□□□ 0.39
SHOX-201ENST00000334060 NRIP1P48552 1158 aa17.46■□□□□ 0.39
SHOX-201ENST00000334060 CLCN4P51793 760 aa17.46■□□□□ 0.39
SHOX-201ENST00000334060 RAB33AQ14088 237 aa17.46■□□□□ 0.39
SHOX-201ENST00000334060 MGAT5BQ3V5L5 792 aa17.46■□□□□ 0.39
SHOX-201ENST00000334060 LILRA6Q6PI73 481 aa17.46■□□□□ 0.39
SHOX-201ENST00000334060 CYP26C1Q6V0L0 522 aa17.46■□□□□ 0.39
SHOX-201ENST00000334060 MMS22LQ6ZRQ5 1243 aa17.46■□□□□ 0.39
SHOX-201ENST00000334060 PIGZQ86VD9 579 aa17.46■□□□□ 0.39
SHOX-201ENST00000334060 SLC22A17Q8WUG5 538 aa17.46■□□□□ 0.39
SHOX-201ENST00000334060 SLC35F5Q8WV83 523 aa17.46■□□□□ 0.39
SHOX-201ENST00000334060 C11orf70Q9BRQ4 267 aa17.46■□□□□ 0.39
SHOX-201ENST00000334060 CYP4F11Q9HBI6 524 aa17.46■□□□□ 0.39
SHOX-201ENST00000334060 ZNHIT6Q9NWK9 470 aaKnown RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms