RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 A0A0G2JND7 137 aa12.92□□□□□ -0.34
VPS33B-201ENST00000333371 CALB1P05937 261 aa12.92□□□□□ -0.34
VPS33B-201ENST00000333371 ITGAVP06756 1048 aa12.92□□□□□ -0.34
VPS33B-201ENST00000333371 ABL2P42684 1182 aa12.92□□□□□ -0.34
VPS33B-201ENST00000333371 NAMPTP43490 491 aa12.92□□□□□ -0.34
VPS33B-201ENST00000333371 MCL1Q07820 350 aa12.92□□□□□ -0.34
VPS33B-201ENST00000333371 NR1H3Q13133 447 aa12.92□□□□□ -0.34
VPS33B-201ENST00000333371 CRYMQ14894 314 aa12.92□□□□□ -0.34
VPS33B-201ENST00000333371 RFWD3Q6PCD5 774 aa12.92□□□□□ -0.34
VPS33B-201ENST00000333371 LRRC6Q86X45 466 aa12.92□□□□□ -0.34
VPS33B-201ENST00000333371 ZNF276Q8N554 614 aa12.92□□□□□ -0.34
VPS33B-201ENST00000333371 FAM71DQ8N9W8 422 aa12.92□□□□□ -0.34
VPS33B-201ENST00000333371 TMEM35BQ8NCS4 154 aa12.92□□□□□ -0.34
VPS33B-201ENST00000333371 FOXP3Q9BZS1 431 aa12.92□□□□□ -0.34
VPS33B-201ENST00000333371 SHOC2Q9UQ13 582 aa12.92□□□□□ -0.34
VPS33B-201ENST00000333371 CSADQ9Y600 493 aa12.92□□□□□ -0.34
VPS33B-201ENST00000333371 USP2O75604 605 aaPredicted RBP12.92□□□□□ -0.34
VPS33B-201ENST00000333371 GJB1P08034 283 aa12.92□□□□□ -0.34
VPS33B-201ENST00000333371 MARK3P27448 753 aa12.92□□□□□ -0.34
VPS33B-201ENST00000333371 BASP1P80723 227 aaKnown RBP12.92□□□□□ -0.34
VPS33B-201ENST00000333371 SLC25A11Q02978 314 aaKnown RBP12.92□□□□□ -0.34
VPS33B-201ENST00000333371 VGLL4Q14135 290 aa12.92□□□□□ -0.34
VPS33B-201ENST00000333371 SLFN12LQ6IEE8 588 aa12.92□□□□□ -0.34
VPS33B-201ENST00000333371 NPNTQ6UXI9 565 aa12.92□□□□□ -0.34
VPS33B-201ENST00000333371 EEPD1Q7L9B9 569 aa12.92□□□□□ -0.34
VPS33B-201ENST00000333371 PRPF31Q8WWY3 499 aaKnown RBP12.92□□□□□ -0.34
VPS33B-201ENST00000333371 RAB3IPQ96QF0 476 aaPredicted RBP12.92□□□□□ -0.34
VPS33B-201ENST00000333371 PCYT2Q99447 389 aa12.92□□□□□ -0.34
VPS33B-201ENST00000333371 CYLDQ9NQC7 956 aa12.92□□□□□ -0.34
VPS33B-201ENST00000333371 ZFP69BQ9UJL9 534 aa12.92□□□□□ -0.34
VPS33B-201ENST00000333371 H0YCG3 227 aa12.92□□□□□ -0.34
VPS33B-201ENST00000333371 FAM189A1O60320 539 aa12.92□□□□□ -0.34
VPS33B-201ENST00000333371 AVILO75366 819 aa12.92□□□□□ -0.34
VPS33B-201ENST00000333371 STAM2O75886 525 aa12.92□□□□□ -0.34
VPS33B-201ENST00000333371 MAP3K6O95382 1288 aa12.92□□□□□ -0.34
VPS33B-201ENST00000333371 GCLCP48506 637 aaPredicted RBP12.92□□□□□ -0.34
VPS33B-201ENST00000333371 MMRN1Q13201 1228 aa12.92□□□□□ -0.34
VPS33B-201ENST00000333371 TAF11Q15544 211 aa12.92□□□□□ -0.34
VPS33B-201ENST00000333371 THNSL1Q8IYQ7 743 aa12.92□□□□□ -0.34
VPS33B-201ENST00000333371 LRRC71Q8N4P6 559 aa12.92□□□□□ -0.34
VPS33B-201ENST00000333371 MAB21L3Q8N8X9 362 aa12.92□□□□□ -0.34
VPS33B-201ENST00000333371 NAT8LQ8N9F0 302 aa12.92□□□□□ -0.34
VPS33B-201ENST00000333371 MZB1Q8WU39 189 aa12.92□□□□□ -0.34
VPS33B-201ENST00000333371 HSPH1Q92598 858 aa12.92□□□□□ -0.34
VPS33B-201ENST00000333371 DCPSQ96C86 337 aaKnown RBP12.92□□□□□ -0.34
VPS33B-201ENST00000333371 MIPEPQ99797 713 aa12.92□□□□□ -0.34
VPS33B-201ENST00000333371 DENND2DQ9H6A0 471 aaPredicted RBP12.92□□□□□ -0.34
VPS33B-201ENST00000333371 SLC24A3Q9HC58 644 aa12.92□□□□□ -0.34
VPS33B-201ENST00000333371 MAFBQ9Y5Q3 323 aaPredicted RBP12.92□□□□□ -0.34
VPS33B-201ENST00000333371 SNCAIPQ9Y6H5 919 aa12.92□□□□□ -0.34
VPS33B-201ENST00000333371 WDR90Q96KV7 1748 aa12.91□□□□□ -0.34
VPS33B-201ENST00000333371 DDNO94850 711 aaPredicted RBP12.91□□□□□ -0.34
VPS33B-201ENST00000333371 LDHAP00338 332 aaKnown RBP12.91□□□□□ -0.34
VPS33B-201ENST00000333371 PIGRP01833 764 aa12.91□□□□□ -0.34
VPS33B-201ENST00000333371 ALDH3A1P30838 453 aa12.91□□□□□ -0.34
VPS33B-201ENST00000333371 RAD23BP54727 409 aa12.91□□□□□ -0.34
VPS33B-201ENST00000333371 ENPEPQ07075 957 aa12.91□□□□□ -0.34
VPS33B-201ENST00000333371 PIGHQ14442 188 aaPredicted RBP12.91□□□□□ -0.34
VPS33B-201ENST00000333371 SH3PXD2AQ5TCZ1 1133 aa12.91□□□□□ -0.34
VPS33B-201ENST00000333371 RGS9BPQ6ZS82 235 aa12.91□□□□□ -0.34
VPS33B-201ENST00000333371 BRSK2Q8IWQ3 736 aa12.91□□□□□ -0.34
VPS33B-201ENST00000333371 SULF1Q8IWU6 871 aa12.91□□□□□ -0.34
VPS33B-201ENST00000333371 DCAKDQ8WVC6 231 aa12.91□□□□□ -0.34
VPS33B-201ENST00000333371 RSAD2Q8WXG1 361 aa12.91□□□□□ -0.34
VPS33B-201ENST00000333371 FAXDC2Q96IV6 333 aa12.91□□□□□ -0.34
VPS33B-201ENST00000333371 NUDCD1Q96RS6 583 aa12.91□□□□□ -0.34
VPS33B-201ENST00000333371 CPXM1Q96SM3 734 aa12.91□□□□□ -0.34
VPS33B-201ENST00000333371 FBXO6Q9NRD1 293 aaPredicted RBP12.91□□□□□ -0.34
VPS33B-201ENST00000333371 METTL5Q9NRN9 209 aaKnown RBP12.91□□□□□ -0.34
VPS33B-201ENST00000333371 SLC24A2Q9UI40 661 aa12.91□□□□□ -0.34
VPS33B-201ENST00000333371 ANK1P16157 1881 aa12.91□□□□□ -0.34
VPS33B-201ENST00000333371 MYO18AQ92614 2054 aaKnown RBP12.91□□□□□ -0.34
VPS33B-201ENST00000333371 DCTN3O75935 186 aa12.91□□□□□ -0.34
VPS33B-201ENST00000333371 FAM155BO75949 473 aa12.91□□□□□ -0.34
VPS33B-201ENST00000333371 NEBLO76041 1014 aa12.91□□□□□ -0.34
VPS33B-201ENST00000333371 KRT3P12035 628 aa12.91□□□□□ -0.34
VPS33B-201ENST00000333371 STXBP2Q15833 593 aa12.91□□□□□ -0.34
VPS33B-201ENST00000333371 SEPT7Q16181 437 aaKnown RBP12.91□□□□□ -0.34
VPS33B-201ENST00000333371 LRRC38Q5VT99 294 aa12.91□□□□□ -0.34
VPS33B-201ENST00000333371 DLK2Q6UY11 383 aa12.91□□□□□ -0.34
VPS33B-201ENST00000333371 GADL1Q6ZQY3 521 aa12.91□□□□□ -0.34
VPS33B-201ENST00000333371 DPH6Q7L8W6 267 aa12.91□□□□□ -0.34
VPS33B-201ENST00000333371 ZC3H18Q86VM9 953 aaKnown RBP12.91□□□□□ -0.34
VPS33B-201ENST00000333371 TRIM50Q86XT4 487 aa12.91□□□□□ -0.34
VPS33B-201ENST00000333371 PALM2Q8IXS6 379 aa12.91□□□□□ -0.34
VPS33B-201ENST00000333371 PPIL6Q8IXY8 311 aa12.91□□□□□ -0.34
VPS33B-201ENST00000333371 CHST13Q8NET6 341 aa12.91□□□□□ -0.34
VPS33B-201ENST00000333371 NIF3L1Q9GZT8 377 aa12.91□□□□□ -0.34
VPS33B-201ENST00000333371 RNPEPL1Q9HAU8 725 aa12.91□□□□□ -0.34
VPS33B-201ENST00000333371 HMGXB4Q9UGU5 601 aa12.91□□□□□ -0.34
VPS33B-201ENST00000333371 XPO7Q9UIA9 1087 aaKnown RBP12.91□□□□□ -0.34
VPS33B-201ENST00000333371 CFAP69A5D8W1 941 aa12.9□□□□□ -0.34
VPS33B-201ENST00000333371 ADCY3O60266 1144 aa12.9□□□□□ -0.34
VPS33B-201ENST00000333371 KRT19P08727 400 aa12.9□□□□□ -0.34
VPS33B-201ENST00000333371 GNAZP19086 355 aa12.9□□□□□ -0.34
VPS33B-201ENST00000333371 KDELR1P24390 212 aa12.9□□□□□ -0.34
VPS33B-201ENST00000333371 ARL4CP56559 192 aa12.9□□□□□ -0.34
VPS33B-201ENST00000333371 PSMC1P62191 440 aaKnown RBP12.9□□□□□ -0.34
VPS33B-201ENST00000333371 CTC1Q2NKJ3 1217 aa12.9□□□□□ -0.34
VPS33B-201ENST00000333371 PARP6Q2NL67 630 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms