RNA–Protein interactions for RNA: ENST00000328945.6

SDR42E1-201, Transcript of short chain dehydrogenase/reductase family 42E, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDR42E1, Length 11,566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR42E1-201ENST00000328945 RNF25Q96BH1 459 aaPredicted RBP5.58□□□□□ -1.52
SDR42E1-201ENST00000328945 FAM111AQ96PZ2 611 aa5.58□□□□□ -1.52
SDR42E1-201ENST00000328945 PUS3Q9BZE2 481 aaKnown RBP5.58□□□□□ -1.52
SDR42E1-201ENST00000328945 VPS33BQ9H267 617 aa5.58□□□□□ -1.52
SDR42E1-201ENST00000328945 UBA2Q9UBT2 640 aaPredicted RBP5.58□□□□□ -1.52
SDR42E1-201ENST00000328945 TBXAS1P24557 533 aaPredicted RBP5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 SKIV2L2P42285 1042 aaKnown RBP5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 SARSP49591 514 aaKnown RBP5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 TRAF2Q12933 501 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 TTC27Q6P3X3 843 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 P3H2Q8IVL5 708 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 DEFB107AQ8IZN7 70 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 GIMAP8Q8ND71 665 aaPredicted RBP5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 DLG3Q92796 817 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 BHMT2Q9H2M3 363 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 EFCAB1Q9HAE3 211 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 TRNAU1APQ9NX07 287 aaKnown RBP5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 CYP2D7A0A087X1C5 515 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 SHOX2O60902 331 aaPredicted RBP5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 GLI1P08151 1106 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 CD58P19256 250 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 IL6STP40189 918 aaPredicted RBP5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 ARL4DP49703 201 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 MECOMQ03112 1051 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 ACCSLQ4AC99 568 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 NLRP10Q86W26 655 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 LCORLQ8N3X6 602 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 HPS3Q969F9 1004 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 WNK4Q96J92 1243 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 ERGIC2Q96RQ1 377 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 ZSWIM1Q9BR11 485 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 MSTO1Q9BUK6 570 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 KLHL8Q9P2G9 620 aaPredicted RBP5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 NFKBIL1Q9UBC1 381 aaPredicted RBP5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 TRIM49D1C9J1S8 452 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 H3BNX3 289 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 ZNF12P17014 697 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 NSUN2Q08J23 767 aaKnown RBP eCLIP5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 BFSP2Q13515 415 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 LBRQ14739 615 aaKnown RBP5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 KNOP1Q1ED39 458 aaKnown RBP5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 SNRNP48Q6IEG0 339 aaKnown RBP5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 DDX53Q86TM3 631 aaKnown RBP5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 XXYLT1Q8NBI6 393 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 UBASH3BQ8TF42 649 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 RMDN1Q96DB5 314 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 FUCA2Q9BTY2 467 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 ARHGEF38Q9NXL2 777 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 SQORQ9Y6N5 450 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 GRIN3BO60391 1043 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 CELF2O95319 508 aaKnown RBP5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 BCAR1P56945 870 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 KCNJ2P63252 427 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 POU5F1BQ06416 359 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 RBM44Q6ZP01 1051 aaKnown RBP5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 OR6J1Q8NGC5 347 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 SH3RF3Q8TEJ3 882 aaPredicted RBP5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 CCDC17Q96LX7 622 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 REXO4Q9GZR2 422 aaKnown RBP5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 POLEQ07864 2286 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 CPDO75976 1380 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 TALDO1P37837 337 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 SERPINH1P50454 418 aaKnown RBP5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 ATXN3P54252 364 aaPredicted RBP5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 ZNF746Q6NUN9 644 aaPredicted RBP5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 PPP1R18Q6NYC8 613 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 PPIL6Q8IXY8 311 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 OSCP1Q8WVF1 389 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 PPP1R36Q96LQ0 422 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 ECSITQ9BQ95 431 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 C17orf80Q9BSJ5 609 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 GDF3Q9NR23 364 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 DMGDHQ9UI17 866 aaKnown RBP5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 ABCB11O95342 1321 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 APOL1O14791 398 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 UPP2O95045 317 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 TMEM253P0C7T8 217 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 COILP38432 576 aaPredicted RBP5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 PROSER3Q2NL68 480 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 ENOSF1Q7L5Y1 443 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 SLC25A41Q8N5S1 370 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 ENGASEQ8NFI3 743 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 B3GALT6Q96L58 329 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 AGPAT1Q99943 283 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 STK33Q9BYT3 514 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 PCIF1Q9H4Z3 704 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 MOV10Q9HCE1 1003 aaKnown RBP5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 AGPAT5Q9NUQ2 364 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 CLIC5Q9NZA1 410 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 CCDC59Q9P031 241 aaKnown RBP5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 C6orf203Q9P0P8 240 aaPredicted RBP5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 MAD2L2Q9UI95 211 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 NEDD4P46934 1319 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 FCHO1O14526 889 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 KRT20P35900 424 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 KCNK10P57789 538 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 MMRN1Q13201 1228 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 SNX17Q15036 470 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 IMPG1Q17R60 797 aa5.57□□□□□ -1.52
SDR42E1-201ENST00000328945 JMJD4Q9H9V9 463 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms