RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 PLA2G4AP47712 749 aa10.83□□□□□ -0.68
VIPAS39-201ENST00000327028 RABGGTBP53611 331 aa10.83□□□□□ -0.68
VIPAS39-201ENST00000327028 SLC8A3P57103 927 aa10.83□□□□□ -0.68
VIPAS39-201ENST00000327028 KRT17Q04695 432 aa10.83□□□□□ -0.68
VIPAS39-201ENST00000327028 PSMD5Q16401 504 aa10.83□□□□□ -0.68
VIPAS39-201ENST00000327028 NFE2Q16621 373 aaPredicted RBP10.83□□□□□ -0.68
VIPAS39-201ENST00000327028 SLC39A12Q504Y0 691 aa10.83□□□□□ -0.68
VIPAS39-201ENST00000327028 KIAA1841Q6NSI8 718 aa10.83□□□□□ -0.68
VIPAS39-201ENST00000327028 RHOT2Q8IXI1 618 aa10.83□□□□□ -0.68
VIPAS39-201ENST00000327028 GPR65Q8IYL9 337 aa10.83□□□□□ -0.68
VIPAS39-201ENST00000327028 IPO4Q8TEX9 1081 aaKnown RBP10.83□□□□□ -0.68
VIPAS39-201ENST00000327028 RIN2Q8WYP3 895 aaPredicted RBP10.83□□□□□ -0.68
VIPAS39-201ENST00000327028 CPXM1Q96SM3 734 aa10.83□□□□□ -0.68
VIPAS39-201ENST00000327028 PLVAPQ9BX97 442 aa10.83□□□□□ -0.68
VIPAS39-201ENST00000327028 CYLDQ9NQC7 956 aa10.83□□□□□ -0.68
VIPAS39-201ENST00000327028 CNOT8Q9UFF9 292 aaKnown RBP10.83□□□□□ -0.68
VIPAS39-201ENST00000327028 STRIP2Q9ULQ0 834 aa10.83□□□□□ -0.68
VIPAS39-201ENST00000327028 MACROD2A1Z1Q3 448 aa10.82□□□□□ -0.68
VIPAS39-201ENST00000327028 H0YGN5 161 aa10.82□□□□□ -0.68
VIPAS39-201ENST00000327028 ATMINO43313 823 aaPredicted RBP10.82□□□□□ -0.68
VIPAS39-201ENST00000327028 URODP06132 367 aa10.82□□□□□ -0.68
VIPAS39-201ENST00000327028 OR4Q2P0C623 313 aa10.82□□□□□ -0.68
VIPAS39-201ENST00000327028 BMPR1AP36894 532 aa10.82□□□□□ -0.68
VIPAS39-201ENST00000327028 GABRB2P47870 512 aa10.82□□□□□ -0.68
VIPAS39-201ENST00000327028 GSCP56915 257 aaPredicted RBP10.82□□□□□ -0.68
VIPAS39-201ENST00000327028 SMARCB1Q12824 385 aa10.82□□□□□ -0.68
VIPAS39-201ENST00000327028 FAM109BQ6ICB4 259 aaPredicted RBP10.82□□□□□ -0.68
VIPAS39-201ENST00000327028 PRSS55Q6UWB4 352 aaPredicted RBP10.82□□□□□ -0.68
VIPAS39-201ENST00000327028 CLEC20AQ6ZU45 233 aa10.82□□□□□ -0.68
VIPAS39-201ENST00000327028 SPATA2LQ8IUW3 424 aaPredicted RBP10.82□□□□□ -0.68
VIPAS39-201ENST00000327028 RNF10Q8N5U6 811 aaKnown RBP10.82□□□□□ -0.68
VIPAS39-201ENST00000327028 SLC4A5Q9BY07 1137 aa10.82□□□□□ -0.68
VIPAS39-201ENST00000327028 MIS12Q9H081 205 aa10.82□□□□□ -0.68
VIPAS39-201ENST00000327028 PCDHA11Q9Y5I1 949 aa10.82□□□□□ -0.68
VIPAS39-201ENST00000327028 KIF5CO60282 957 aa10.82□□□□□ -0.68
VIPAS39-201ENST00000327028 AP1G2O75843 785 aa10.82□□□□□ -0.68
VIPAS39-201ENST00000327028 MTA2O94776 668 aa10.82□□□□□ -0.68
VIPAS39-201ENST00000327028 RRM1P23921 792 aa10.82□□□□□ -0.68
VIPAS39-201ENST00000327028 RPL34P49207 117 aaKnown RBP10.82□□□□□ -0.68
VIPAS39-201ENST00000327028 HADHBP55084 474 aaKnown RBP10.82□□□□□ -0.68
VIPAS39-201ENST00000327028 SNX16P57768 344 aa10.82□□□□□ -0.68
VIPAS39-201ENST00000327028 SLC8B1Q6J4K2 584 aa10.82□□□□□ -0.68
VIPAS39-201ENST00000327028 PMF1Q6P1K2 205 aa10.82□□□□□ -0.68
VIPAS39-201ENST00000327028 RSPO2Q6UXX9 243 aaPredicted RBP10.82□□□□□ -0.68
VIPAS39-201ENST00000327028 VPS52Q8N1B4 723 aa10.82□□□□□ -0.68
VIPAS39-201ENST00000327028 KLHL23Q8NBE8 558 aa10.82□□□□□ -0.68
VIPAS39-201ENST00000327028 FUBP3Q96I24 572 aaKnown RBP eCLIP10.82□□□□□ -0.68
VIPAS39-201ENST00000327028 CALR3Q96L12 384 aaKnown RBP10.82□□□□□ -0.68
VIPAS39-201ENST00000327028 HSFY1Q96LI6 401 aa10.82□□□□□ -0.68
VIPAS39-201ENST00000327028 SYNCQ9H7C4 482 aa10.82□□□□□ -0.68
VIPAS39-201ENST00000327028 CSNK1G1Q9HCP0 422 aa10.82□□□□□ -0.68
VIPAS39-201ENST00000327028 MYO1AQ9UBC5 1043 aa10.82□□□□□ -0.68
VIPAS39-201ENST00000327028 SALL4Q9UJQ4 1053 aa10.82□□□□□ -0.68
VIPAS39-201ENST00000327028 LZTS1Q9Y250 596 aa10.82□□□□□ -0.68
VIPAS39-201ENST00000327028 SCINQ9Y6U3 715 aa10.82□□□□□ -0.68
VIPAS39-201ENST00000327028 GRXCR1A8MXD5 290 aa10.81□□□□□ -0.68
VIPAS39-201ENST00000327028 TULP2O00295 520 aa10.81□□□□□ -0.68
VIPAS39-201ENST00000327028 ERBB2P04626 1255 aa10.81□□□□□ -0.68
VIPAS39-201ENST00000327028 CPB1P15086 417 aa10.81□□□□□ -0.68
VIPAS39-201ENST00000327028 ACADSBP45954 432 aa10.81□□□□□ -0.68
VIPAS39-201ENST00000327028 RGS7P49802 495 aa10.81□□□□□ -0.68
VIPAS39-201ENST00000327028 GPR17Q13304 367 aa10.81□□□□□ -0.68
VIPAS39-201ENST00000327028 PTPN14Q15678 1187 aa10.81□□□□□ -0.68
VIPAS39-201ENST00000327028 IFI16Q16666 785 aaKnown RBP10.81□□□□□ -0.68
VIPAS39-201ENST00000327028 CFAP221Q4G0U5 840 aa10.81□□□□□ -0.68
VIPAS39-201ENST00000327028 C2CD6Q53TS8 623 aa10.81□□□□□ -0.68
VIPAS39-201ENST00000327028 PLEKHA7Q6IQ23 1121 aa10.81□□□□□ -0.68
VIPAS39-201ENST00000327028 SLC35G2Q8TBE7 412 aa10.81□□□□□ -0.68
VIPAS39-201ENST00000327028 C2orf15Q8WU43 125 aaKnown RBP10.81□□□□□ -0.68
VIPAS39-201ENST00000327028 C18orf8Q96DM3 657 aa10.81□□□□□ -0.68
VIPAS39-201ENST00000327028 C16orf45Q96MC5 204 aaPredicted RBP10.81□□□□□ -0.68
VIPAS39-201ENST00000327028 SAMD11Q96NU1 681 aa10.81□□□□□ -0.68
VIPAS39-201ENST00000327028 SMOQ99835 787 aa10.81□□□□□ -0.68
VIPAS39-201ENST00000327028 RHOBTB2Q9BYZ6 727 aa10.81□□□□□ -0.68
VIPAS39-201ENST00000327028 UBXN6Q9BZV1 441 aa10.81□□□□□ -0.68
VIPAS39-201ENST00000327028 ZBP1Q9H171 429 aa10.81□□□□□ -0.68
VIPAS39-201ENST00000327028 ABCB6Q9NP58 842 aa10.81□□□□□ -0.68
VIPAS39-201ENST00000327028 DMAP1Q9NPF5 467 aaPredicted RBP10.81□□□□□ -0.68
VIPAS39-201ENST00000327028 CTTNBP2NLQ9P2B4 639 aa10.81□□□□□ -0.68
VIPAS39-201ENST00000327028 WDR35Q9P2L0 1181 aa10.81□□□□□ -0.68
VIPAS39-201ENST00000327028 UVRAGQ9P2Y5 699 aa10.81□□□□□ -0.68
VIPAS39-201ENST00000327028 PAXBP1Q9Y5B6 917 aa10.81□□□□□ -0.68
VIPAS39-201ENST00000327028 PCDHB5Q9Y5E4 795 aa10.81□□□□□ -0.68
VIPAS39-201ENST00000327028 E5RJQ4 531 aa10.81□□□□□ -0.68
VIPAS39-201ENST00000327028 C5orf67F2Z3F1 127 aa10.81□□□□□ -0.68
VIPAS39-201ENST00000327028 KIF2AO00139 706 aaPredicted RBP10.81□□□□□ -0.68
VIPAS39-201ENST00000327028 MYOGP15173 224 aa10.81□□□□□ -0.68
VIPAS39-201ENST00000327028 MAGEA11P43364 429 aa10.81□□□□□ -0.68
VIPAS39-201ENST00000327028 MAP3K7CLP57077 242 aa10.81□□□□□ -0.68
VIPAS39-201ENST00000327028 CREMQ03060 361 aa10.81□□□□□ -0.68
VIPAS39-201ENST00000327028 ZNF268Q14587 947 aaPredicted RBP10.81□□□□□ -0.68
VIPAS39-201ENST00000327028 CYP4A22Q5TCH4 519 aa10.81□□□□□ -0.68
VIPAS39-201ENST00000327028 TMEM110Q86TL2 294 aa10.81□□□□□ -0.68
VIPAS39-201ENST00000327028 XYLT1Q86Y38 959 aa10.81□□□□□ -0.68
VIPAS39-201ENST00000327028 FBXO22Q8NEZ5 403 aa10.81□□□□□ -0.68
VIPAS39-201ENST00000327028 KCTD13Q8WZ19 329 aa10.81□□□□□ -0.68
VIPAS39-201ENST00000327028 NUP85Q9BW27 656 aa10.81□□□□□ -0.68
VIPAS39-201ENST00000327028 ST7Q9NRC1 585 aa10.81□□□□□ -0.68
VIPAS39-201ENST00000327028 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.81□□□□□ -0.68
VIPAS39-201ENST00000327028 TMEM30AQ9NV96 361 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms