RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 ABHD2P08910 425 aa15.36■□□□□ 0.05
TCOF1-201ENST00000323668 RPA3P35244 121 aaPredicted RBP15.36■□□□□ 0.05
TCOF1-201ENST00000323668 IREB2P48200 963 aaKnown RBP15.36■□□□□ 0.05
TCOF1-201ENST00000323668 NCALDP61601 193 aa15.36■□□□□ 0.05
TCOF1-201ENST00000323668 TRIP10Q15642 601 aa15.36■□□□□ 0.05
TCOF1-201ENST00000323668 RARS2Q5T160 578 aaKnown RBP15.36■□□□□ 0.05
TCOF1-201ENST00000323668 SUDS3Q9H7L9 328 aaPredicted RBP15.36■□□□□ 0.05
TCOF1-201ENST00000323668 SAR1AQ9NR31 198 aa15.36■□□□□ 0.05
TCOF1-201ENST00000323668 USP18Q9UMW8 372 aa15.36■□□□□ 0.05
TCOF1-201ENST00000323668 PARP4Q9UKK3 1724 aaKnown RBP15.36■□□□□ 0.05
TCOF1-201ENST00000323668 SPATA31A6Q5VVP1 1343 aa15.36■□□□□ 0.05
TCOF1-201ENST00000323668 MAP3K6O95382 1288 aa15.36■□□□□ 0.05
TCOF1-201ENST00000323668 HSPA8P11142 646 aaKnown RBP15.36■□□□□ 0.05
TCOF1-201ENST00000323668 ELK3P41970 407 aa15.36■□□□□ 0.05
TCOF1-201ENST00000323668 SLC45A4Q5BKX6 768 aa15.36■□□□□ 0.05
TCOF1-201ENST00000323668 HPDLQ96IR7 371 aa15.36■□□□□ 0.05
TCOF1-201ENST00000323668 ATP9BO43861 1147 aa15.36■□□□□ 0.05
TCOF1-201ENST00000323668 TXNP10599 105 aaKnown RBP15.36■□□□□ 0.05
TCOF1-201ENST00000323668 TBCCQ15814 346 aa15.36■□□□□ 0.05
TCOF1-201ENST00000323668 APLFQ8IW19 511 aaPredicted RBP15.36■□□□□ 0.05
TCOF1-201ENST00000323668 MBOAT7Q96N66 472 aa15.36■□□□□ 0.05
TCOF1-201ENST00000323668 AGAP3Q96P47 875 aa15.36■□□□□ 0.05
TCOF1-201ENST00000323668 DEFB129Q9H1M3 183 aa15.36■□□□□ 0.05
TCOF1-201ENST00000323668 SMARCAD1Q9H4L7 1026 aa15.36■□□□□ 0.05
TCOF1-201ENST00000323668 ATP8B3O60423 1300 aa15.36■□□□□ 0.05
TCOF1-201ENST00000323668 ITGB3P05106 788 aa15.36■□□□□ 0.05
TCOF1-201ENST00000323668 UBTFL6P0CB48 400 aaPredicted RBP15.36■□□□□ 0.05
TCOF1-201ENST00000323668 OCRLQ01968 901 aa15.36■□□□□ 0.05
TCOF1-201ENST00000323668 NME3Q13232 169 aa15.36■□□□□ 0.05
TCOF1-201ENST00000323668 TAF12Q16514 161 aa15.36■□□□□ 0.05
TCOF1-201ENST00000323668 RWDD4Q6NW29 188 aaKnown RBP15.36■□□□□ 0.05
TCOF1-201ENST00000323668 FAM83AQ86UY5 434 aa15.36■□□□□ 0.05
TCOF1-201ENST00000323668 PRMT7Q9NVM4 692 aaPredicted RBP15.36■□□□□ 0.05
TCOF1-201ENST00000323668 DMAC2Q9NW81 257 aa15.36■□□□□ 0.05
TCOF1-201ENST00000323668 ADA2Q9NZK5 511 aa15.36■□□□□ 0.05
TCOF1-201ENST00000323668 MAGEA13PA6NCF6 341 aa15.35■□□□□ 0.05
TCOF1-201ENST00000323668 TAC1P20366 129 aa15.35■□□□□ 0.05
TCOF1-201ENST00000323668 ORC1Q13415 861 aa15.35■□□□□ 0.05
TCOF1-201ENST00000323668 KPNB1Q14974 876 aaKnown RBP15.35■□□□□ 0.05
TCOF1-201ENST00000323668 ATP13A4Q4VNC1 1196 aa15.35■□□□□ 0.05
TCOF1-201ENST00000323668 ITPRIPL1Q6GPH6 555 aa15.35■□□□□ 0.05
TCOF1-201ENST00000323668 PIK3R5Q8WYR1 880 aa15.35■□□□□ 0.05
TCOF1-201ENST00000323668 MIEF2Q96C03 454 aa15.35■□□□□ 0.05
TCOF1-201ENST00000323668 BTBD10Q9BSF8 475 aa15.35■□□□□ 0.05
TCOF1-201ENST00000323668 CNPY3Q9BT09 278 aa15.35■□□□□ 0.05
TCOF1-201ENST00000323668 FAM49BQ9NUQ9 324 aa15.35■□□□□ 0.05
TCOF1-201ENST00000323668 GTSE1Q9NYZ3 720 aa15.35■□□□□ 0.05
TCOF1-201ENST00000323668 AJAP1Q9UKB5 411 aaPredicted RBP15.35■□□□□ 0.05
TCOF1-201ENST00000323668 NPM3O75607 178 aaKnown RBP15.35■□□□□ 0.05
TCOF1-201ENST00000323668 SCUBE1Q8IWY4 988 aa15.35■□□□□ 0.05
TCOF1-201ENST00000323668 SEMA4DQ92854 862 aa15.35■□□□□ 0.05
TCOF1-201ENST00000323668 ZBTB45Q96K62 511 aaPredicted RBP15.35■□□□□ 0.05
TCOF1-201ENST00000323668 NACA2Q9H009 215 aa15.35■□□□□ 0.05
TCOF1-201ENST00000323668 E7ENQ6 273 aa15.35■□□□□ 0.05
TCOF1-201ENST00000323668 LIASO43766 372 aa15.35■□□□□ 0.05
TCOF1-201ENST00000323668 GAS2O43903 313 aaKnown RBP15.35■□□□□ 0.05
TCOF1-201ENST00000323668 AQP5P55064 265 aa15.35■□□□□ 0.05
TCOF1-201ENST00000323668 HADHBP55084 474 aaKnown RBP15.35■□□□□ 0.05
TCOF1-201ENST00000323668 RIPK1Q13546 671 aa15.35■□□□□ 0.05
TCOF1-201ENST00000323668 PDK4Q16654 411 aa15.35■□□□□ 0.05
TCOF1-201ENST00000323668 SNX30Q5VWJ9 437 aa15.35■□□□□ 0.05
TCOF1-201ENST00000323668 MICALL2Q8IY33 904 aa15.35■□□□□ 0.05
TCOF1-201ENST00000323668 MRPL40Q9NQ50 206 aaKnown RBP15.35■□□□□ 0.05
TCOF1-201ENST00000323668 DRG1Q9Y295 367 aaKnown RBP15.35■□□□□ 0.05
TCOF1-201ENST00000323668 UBIAD1Q9Y5Z9 338 aa15.35■□□□□ 0.05
TCOF1-201ENST00000323668 MYH10P35580 1976 aa15.35■□□□□ 0.05
TCOF1-201ENST00000323668 KRT16P08779 473 aa15.34■□□□□ 0.05
TCOF1-201ENST00000323668 TCF7P36402 384 aaPredicted RBP15.34■□□□□ 0.05
TCOF1-201ENST00000323668 PTGIRP43119 386 aa15.34■□□□□ 0.05
TCOF1-201ENST00000323668 ZNF772Q68DY9 489 aaPredicted RBP15.34■□□□□ 0.05
TCOF1-201ENST00000323668 CHST13Q8NET6 341 aa15.34■□□□□ 0.05
TCOF1-201ENST00000323668 MAGEC3Q8TD91 643 aa15.34■□□□□ 0.05
TCOF1-201ENST00000323668 KIAA1683Q9H0B3 1180 aa15.34■□□□□ 0.05
TCOF1-201ENST00000323668 SLCO1B3Q9NPD5 702 aa15.34■□□□□ 0.05
TCOF1-201ENST00000323668 PAMP19021 973 aa15.34■□□□□ 0.05
TCOF1-201ENST00000323668 PAX7P23759 505 aa15.34■□□□□ 0.05
TCOF1-201ENST00000323668 COPAP53621 1224 aa15.34■□□□□ 0.05
TCOF1-201ENST00000323668 LRRC38Q5VT99 294 aa15.34■□□□□ 0.05
TCOF1-201ENST00000323668 PRUNE1Q86TP1 453 aa15.34■□□□□ 0.05
TCOF1-201ENST00000323668 GRHL1Q9NZI5 618 aa15.34■□□□□ 0.05
TCOF1-201ENST00000323668 PDP2Q9P2J9 529 aa15.34■□□□□ 0.05
TCOF1-201ENST00000323668 C5orf60A6NFR6 353 aa15.34■□□□□ 0.05
TCOF1-201ENST00000323668 RASSF9O75901 435 aa15.34■□□□□ 0.05
TCOF1-201ENST00000323668 ETS1P14921 441 aa15.34■□□□□ 0.05
TCOF1-201ENST00000323668 SERPINB3P29508 390 aa15.34■□□□□ 0.05
TCOF1-201ENST00000323668 SPRP35270 261 aaPredicted RBP15.34■□□□□ 0.05
TCOF1-201ENST00000323668 CNGA3Q16281 694 aa15.34■□□□□ 0.05
TCOF1-201ENST00000323668 TBC1D10AQ9BXI6 508 aa15.34■□□□□ 0.05
TCOF1-201ENST00000323668 MYH8P13535 1937 aa15.34■□□□□ 0.05
TCOF1-201ENST00000323668 FCHO1O14526 889 aa15.34■□□□□ 0.05
TCOF1-201ENST00000323668 POLBP06746 335 aa15.34■□□□□ 0.05
TCOF1-201ENST00000323668 PDK2Q15119 407 aa15.34■□□□□ 0.05
TCOF1-201ENST00000323668 EFCAB12Q6NXP0 572 aa15.34■□□□□ 0.05
TCOF1-201ENST00000323668 TRIM67Q6ZTA4 783 aa15.34■□□□□ 0.05
TCOF1-201ENST00000323668 IL31RAQ8NI17 732 aa15.34■□□□□ 0.05
TCOF1-201ENST00000323668 DRC3Q9H069 523 aa15.34■□□□□ 0.05
TCOF1-201ENST00000323668 KIF9Q9HAQ2 790 aa15.34■□□□□ 0.05
TCOF1-201ENST00000323668 CDY2AQ9Y6F7 541 aa15.34■□□□□ 0.05
TCOF1-201ENST00000323668 CDY1Q9Y6F8 540 aa15.34■□□□□ 0.05
TCOF1-201ENST00000323668 IGLV3-22A0A075B6J6 115 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms