RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 PPP4R4Q6NUP7 873 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 DGKHQ86XP1 1220 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 CCDC117Q8IWD4 279 aaPredicted RBP7.33□□□□□ -1.24
SMC1A-201ENST00000322213 ZNF75CPQ92670 426 aaPredicted RBP7.33□□□□□ -1.24
SMC1A-201ENST00000322213 RBM17Q96I25 401 aaKnown RBP7.33□□□□□ -1.24
SMC1A-201ENST00000322213 APOPT1Q96IL0 206 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 BDH2Q9BUT1 245 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 PCIF1Q9H4Z3 704 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 ATPIF1Q9UII2 106 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 RAB26Q9ULW5 256 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 RBBP6Q7Z6E9 1792 aaKnown RBP7.33□□□□□ -1.24
SMC1A-201ENST00000322213 TAB1Q15750 504 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 CLEC4GQ6UXB4 293 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 SLC25A41Q8N5S1 370 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 SPATA16Q9BXB7 569 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 GOLPH3Q9H4A6 298 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 FANCEQ9HB96 536 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 INPP5FQ9Y2H2 1132 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 ALG6Q9Y672 507 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 POLR2AP24928 1970 aaKnown RBP7.33□□□□□ -1.24
SMC1A-201ENST00000322213 DDX3XO00571 662 aaKnown RBP eCLIP7.33□□□□□ -1.249e-54■■■■■ 35.8
SMC1A-201ENST00000322213 GUCY1B2O75343 617 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 ZBTB41Q5SVQ8 909 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 CAPSLQ8WWF8 208 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 NWD2Q9ULI1 1742 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 PLEKHG3A1L390 1219 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 PP2D1A8MPX8 630 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 BTNL10A8MVZ5 291 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 EVPLLA8MZ36 301 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 VAV1P15498 845 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 PON1P27169 355 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 ACVR2BQ13705 512 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 SEL1L3Q68CR1 1132 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 ZBTB49Q6ZSB9 765 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 DDIASQ8IXT1 998 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 FBXO25Q8TCJ0 367 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 OSBPL11Q9BXB4 747 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 PACSIN1Q9BY11 444 aa7.33□□□□□ -1.24
SMC1A-201ENST00000322213 TDRD15B5MCY1 1934 aaKnown RBP7.32□□□□□ -1.24
SMC1A-201ENST00000322213 TRIM64CA6NLI5 447 aa7.32□□□□□ -1.24
SMC1A-201ENST00000322213 NEMP1O14524 444 aa7.32□□□□□ -1.24
SMC1A-201ENST00000322213 ETS2P15036 469 aa7.32□□□□□ -1.24
SMC1A-201ENST00000322213 NCALDP61601 193 aa7.32□□□□□ -1.24
SMC1A-201ENST00000322213 IFI35P80217 286 aaPredicted RBP7.32□□□□□ -1.24
SMC1A-201ENST00000322213 ITGADQ13349 1161 aa7.32□□□□□ -1.24
SMC1A-201ENST00000322213 HABP4Q5JVS0 413 aaKnown RBP7.32□□□□□ -1.24
SMC1A-201ENST00000322213 ZNF677Q86XU0 584 aa7.32□□□□□ -1.24
SMC1A-201ENST00000322213 CCDC60Q8IWA6 550 aaPredicted RBP7.32□□□□□ -1.24
SMC1A-201ENST00000322213 C19orf60Q96EN9 201 aa7.32□□□□□ -1.24
SMC1A-201ENST00000322213 C9orf16Q9BUW7 83 aa7.32□□□□□ -1.24
SMC1A-201ENST00000322213 GPAMQ9HCL2 828 aa7.32□□□□□ -1.24
SMC1A-201ENST00000322213 PCYOX1Q9UHG3 505 aa7.32□□□□□ -1.24
SMC1A-201ENST00000322213 STOML2Q9UJZ1 356 aa7.32□□□□□ -1.24
SMC1A-201ENST00000322213 PNMA3Q9UL41 463 aa7.32□□□□□ -1.24
SMC1A-201ENST00000322213 SHOC2Q9UQ13 582 aa7.32□□□□□ -1.24
SMC1A-201ENST00000322213 LRRC37A3O60309 1634 aa7.32□□□□□ -1.24
SMC1A-201ENST00000322213 KCNQ3O43525 872 aa7.32□□□□□ -1.24
SMC1A-201ENST00000322213 IDH3BO43837 385 aa7.32□□□□□ -1.24
SMC1A-201ENST00000322213 CHURC1Q8WUH1 139 aa7.32□□□□□ -1.24
SMC1A-201ENST00000322213 TUBGCP5Q96RT8 1024 aa7.32□□□□□ -1.24
SMC1A-201ENST00000322213 NUDT12Q9BQG2 462 aa7.32□□□□□ -1.24
SMC1A-201ENST00000322213 FAM8A1Q9UBU6 413 aa7.32□□□□□ -1.24
SMC1A-201ENST00000322213 SLIT3O75094 1523 aa7.32□□□□□ -1.24
SMC1A-201ENST00000322213 PENKP01210 267 aaPredicted RBP7.32□□□□□ -1.24
SMC1A-201ENST00000322213 CD151P48509 253 aa7.32□□□□□ -1.24
SMC1A-201ENST00000322213 C4orf22Q6V702 233 aa7.32□□□□□ -1.24
SMC1A-201ENST00000322213 ILDR1Q86SU0 546 aaPredicted RBP7.32□□□□□ -1.24
SMC1A-201ENST00000322213 SH3TC2Q8TF17 1288 aa7.32□□□□□ -1.24
SMC1A-201ENST00000322213 PIGSQ96S52 555 aa7.32□□□□□ -1.24
SMC1A-201ENST00000322213 BBS2Q9BXC9 721 aa7.32□□□□□ -1.24
SMC1A-201ENST00000322213 CLEC4MQ9H2X3 399 aaPredicted RBP7.32□□□□□ -1.24
SMC1A-201ENST00000322213 TRNAU1APQ9NX07 287 aaKnown RBP7.32□□□□□ -1.24
SMC1A-201ENST00000322213 NAALADL1Q9UQQ1 740 aa7.32□□□□□ -1.24
SMC1A-201ENST00000322213 PNPLA7Q6ZV29 1317 aa7.32□□□□□ -1.24
SMC1A-201ENST00000322213 ALADP13716 330 aa7.32□□□□□ -1.24
SMC1A-201ENST00000322213 EIF2AK2P19525 551 aaKnown RBP7.32□□□□□ -1.24
SMC1A-201ENST00000322213 ERVK-9P63128 1117 aa7.32□□□□□ -1.24
SMC1A-201ENST00000322213 RBBP7Q16576 425 aa7.32□□□□□ -1.24
SMC1A-201ENST00000322213 FNIP1Q8TF40 1166 aa7.32□□□□□ -1.24
SMC1A-201ENST00000322213 JDP2Q8WYK2 163 aa7.32□□□□□ -1.24
SMC1A-201ENST00000322213 RNF25Q96BH1 459 aaPredicted RBP7.32□□□□□ -1.24
SMC1A-201ENST00000322213 TSPAN17Q96FV3 270 aa7.32□□□□□ -1.24
SMC1A-201ENST00000322213 C6orf62Q9GZU0 229 aaPredicted RBP7.32□□□□□ -1.24
SMC1A-201ENST00000322213 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.32□□□□□ -1.24
SMC1A-201ENST00000322213 CNOT3O75175 753 aaKnown RBP7.32□□□□□ -1.24
SMC1A-201ENST00000322213 WBP4O75554 376 aaKnown RBP7.32□□□□□ -1.24
SMC1A-201ENST00000322213 FDPSP14324 419 aaKnown RBP7.32□□□□□ -1.24
SMC1A-201ENST00000322213 STK4Q13043 487 aa7.32□□□□□ -1.24
SMC1A-201ENST00000322213 LAMC2Q13753 1193 aa7.32□□□□□ -1.24
SMC1A-201ENST00000322213 ITPRIPL1Q6GPH6 555 aa7.32□□□□□ -1.24
SMC1A-201ENST00000322213 KCTD1Q719H9 257 aa7.32□□□□□ -1.24
SMC1A-201ENST00000322213 MAGEB5Q9BZ81 275 aa7.32□□□□□ -1.24
SMC1A-201ENST00000322213 TRIM8Q9BZR9 551 aa7.32□□□□□ -1.24
SMC1A-201ENST00000322213 IL25Q9H293 177 aa7.32□□□□□ -1.24
SMC1A-201ENST00000322213 TMEM245Q9H330 911 aa7.32□□□□□ -1.24
SMC1A-201ENST00000322213 STN1Q9H668 368 aaKnown RBP7.32□□□□□ -1.24
SMC1A-201ENST00000322213 KLHL8Q9P2G9 620 aaPredicted RBP7.32□□□□□ -1.24
SMC1A-201ENST00000322213 TOPAZ1Q8N9V7 1692 aa7.32□□□□□ -1.24
SMC1A-201ENST00000322213 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.32□□□□□ -1.24
SMC1A-201ENST00000322213 RGS5O15539 181 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms