RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 REXO2Q9Y3B8 237 aaKnown RBP16.31■□□□□ 0.2
PDLIM5-202ENST00000318007 RWDD3Q9Y3V2 267 aa16.31■□□□□ 0.2
PDLIM5-202ENST00000318007 MYO9BQ13459 2157 aa16.31■□□□□ 0.2
PDLIM5-202ENST00000318007 H7C4K7 107 aa16.3■□□□□ 0.2
PDLIM5-202ENST00000318007 PER2O15055 1255 aa16.3■□□□□ 0.2
PDLIM5-202ENST00000318007 TEX28O15482 410 aa16.3■□□□□ 0.2
PDLIM5-202ENST00000318007 IPO7O95373 1038 aaKnown RBP16.3■□□□□ 0.2
PDLIM5-202ENST00000318007 ABL1P00519 1130 aa16.3■□□□□ 0.2
PDLIM5-202ENST00000318007 CNPP09543 421 aaKnown RBP16.3■□□□□ 0.2
PDLIM5-202ENST00000318007 NSFP46459 744 aaKnown RBP16.3■□□□□ 0.2
PDLIM5-202ENST00000318007 CAMK1Q14012 370 aa16.3■□□□□ 0.2
PDLIM5-202ENST00000318007 CNGA2Q16280 664 aa16.3■□□□□ 0.2
PDLIM5-202ENST00000318007 MGAT5BQ3V5L5 792 aa16.3■□□□□ 0.2
PDLIM5-202ENST00000318007 MMS22LQ6ZRQ5 1243 aa16.3■□□□□ 0.2
PDLIM5-202ENST00000318007 FAM161BQ96MY7 647 aa16.3■□□□□ 0.2
PDLIM5-202ENST00000318007 PKMYT1Q99640 499 aa16.3■□□□□ 0.2
PDLIM5-202ENST00000318007 TRIM10Q9UDY6 481 aa16.3■□□□□ 0.2
PDLIM5-202ENST00000318007 CEP83Q9Y592 693 aa16.3■□□□□ 0.2
PDLIM5-202ENST00000318007 USP27XA6NNY8 438 aa16.29■□□□□ 0.2
PDLIM5-202ENST00000318007 FTLP02792 175 aaPredicted RBP16.29■□□□□ 0.2
PDLIM5-202ENST00000318007 FAM200BP0CF97 657 aa16.29■□□□□ 0.2
PDLIM5-202ENST00000318007 CTSAP10619 480 aa16.29■□□□□ 0.2
PDLIM5-202ENST00000318007 GRIK1P39086 918 aa16.29■□□□□ 0.2
PDLIM5-202ENST00000318007 NOMO3P69849 1222 aa16.29■□□□□ 0.2
PDLIM5-202ENST00000318007 DUSP4Q13115 394 aa16.29■□□□□ 0.2
PDLIM5-202ENST00000318007 DDR2Q16832 855 aa16.29■□□□□ 0.2
PDLIM5-202ENST00000318007 CLEC16AQ2KHT3 1053 aa16.29■□□□□ 0.2
PDLIM5-202ENST00000318007 PMF1Q6P1K2 205 aa16.29■□□□□ 0.2
PDLIM5-202ENST00000318007 FAM171BQ6P995 826 aa16.29■□□□□ 0.2
PDLIM5-202ENST00000318007 LCLAT1Q6UWP7 414 aa16.29■□□□□ 0.2
PDLIM5-202ENST00000318007 CLEC20AQ6ZU45 233 aa16.29■□□□□ 0.2
PDLIM5-202ENST00000318007 ZNF677Q86XU0 584 aa16.29■□□□□ 0.2
PDLIM5-202ENST00000318007 CCDC170Q8IYT3 715 aa16.29■□□□□ 0.2
PDLIM5-202ENST00000318007 PRO3102Q9H379 93 aa16.29■□□□□ 0.2
PDLIM5-202ENST00000318007 SYNCQ9H7C4 482 aa16.29■□□□□ 0.2
PDLIM5-202ENST00000318007 MYO1AQ9UBC5 1043 aa16.29■□□□□ 0.2
PDLIM5-202ENST00000318007 MTMR11A4FU01 709 aa16.29■□□□□ 0.2
PDLIM5-202ENST00000318007 RCCD1A6NED2 376 aa16.29■□□□□ 0.2
PDLIM5-202ENST00000318007 F8VP50 259 aa16.29■□□□□ 0.2
PDLIM5-202ENST00000318007 UNGP13051 313 aaPredicted RBP16.29■□□□□ 0.2
PDLIM5-202ENST00000318007 LCP1P13796 627 aa16.29■□□□□ 0.2
PDLIM5-202ENST00000318007 ERVK-21P61565 698 aa16.29■□□□□ 0.2
PDLIM5-202ENST00000318007 KIAA1328Q86T90 577 aa16.29■□□□□ 0.2
PDLIM5-202ENST00000318007 DCP1BQ8IZD4 617 aaKnown RBP16.29■□□□□ 0.2
PDLIM5-202ENST00000318007 CPXM1Q96SM3 734 aa16.29■□□□□ 0.2
PDLIM5-202ENST00000318007 PLVAPQ9BX97 442 aa16.29■□□□□ 0.2
PDLIM5-202ENST00000318007 DNAI2Q9GZS0 605 aa16.29■□□□□ 0.2
PDLIM5-202ENST00000318007 MIS12Q9H081 205 aa16.29■□□□□ 0.2
PDLIM5-202ENST00000318007 THAP2Q9H0W7 228 aa16.29■□□□□ 0.2
PDLIM5-202ENST00000318007 LZTFL1Q9NQ48 299 aa16.29■□□□□ 0.2
PDLIM5-202ENST00000318007 PCDHA13Q9Y5I0 950 aa16.29■□□□□ 0.2
PDLIM5-202ENST00000318007 OR6C75A6NL08 312 aa16.28■□□□□ 0.2
PDLIM5-202ENST00000318007 C5orf67F2Z3F1 127 aa16.28■□□□□ 0.2
PDLIM5-202ENST00000318007 TBC1D4O60343 1298 aa16.28■□□□□ 0.2
PDLIM5-202ENST00000318007 GJB6O95452 261 aa16.28■□□□□ 0.2
PDLIM5-202ENST00000318007 NPR3P17342 541 aa16.28■□□□□ 0.2
PDLIM5-202ENST00000318007 GPD2P43304 727 aa16.28■□□□□ 0.2
PDLIM5-202ENST00000318007 BCAT1P54687 386 aa16.28■□□□□ 0.2
PDLIM5-202ENST00000318007 PDCLQ13371 301 aa16.28■□□□□ 0.2
PDLIM5-202ENST00000318007 PTPN20Q4JDL3 420 aa16.28■□□□□ 0.2
PDLIM5-202ENST00000318007 ARHGAP17Q68EM7 881 aa16.28■□□□□ 0.2
PDLIM5-202ENST00000318007 GPRIN1Q7Z2K8 1008 aa16.28■□□□□ 0.2
PDLIM5-202ENST00000318007 ANKRD52Q8NB46 1076 aa16.28■□□□□ 0.2
PDLIM5-202ENST00000318007 TMEM35BQ8NCS4 154 aa16.28■□□□□ 0.2
PDLIM5-202ENST00000318007 SMARCD1Q96GM5 515 aa16.28■□□□□ 0.2
PDLIM5-202ENST00000318007 HNRNPABQ99729 332 aaKnown RBP16.28■□□□□ 0.2
PDLIM5-202ENST00000318007 SMOQ99835 787 aa16.28■□□□□ 0.2
PDLIM5-202ENST00000318007 FAM124BQ9H5Z6 455 aaPredicted RBP16.28■□□□□ 0.2
PDLIM5-202ENST00000318007 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.28■□□□□ 0.2
PDLIM5-202ENST00000318007 KIAA1257Q9ULG3 409 aa16.28■□□□□ 0.2
PDLIM5-202ENST00000318007 PCDHGC3Q9UN70 934 aa16.28■□□□□ 0.2
PDLIM5-202ENST00000318007 ADGRG1Q9Y653 693 aa16.28■□□□□ 0.2
PDLIM5-202ENST00000318007 DUSP10Q9Y6W6 482 aa16.28■□□□□ 0.2
PDLIM5-202ENST00000318007 EIF3CLB5ME19 914 aaKnown RBP16.27■□□□□ 0.2
PDLIM5-202ENST00000318007 E5RJQ4 531 aa16.27■□□□□ 0.2
PDLIM5-202ENST00000318007 H3BNC9 293 aa16.27■□□□□ 0.2
PDLIM5-202ENST00000318007 VNN2O95498 520 aa16.27■□□□□ 0.2
PDLIM5-202ENST00000318007 CYP1A1P04798 512 aaPredicted RBP16.27■□□□□ 0.2
PDLIM5-202ENST00000318007 KLRC2P26717 231 aa16.27■□□□□ 0.2
PDLIM5-202ENST00000318007 MAGEA1P43355 309 aa16.27■□□□□ 0.2
PDLIM5-202ENST00000318007 RBM10P98175 930 aaKnown RBP16.27■□□□□ 0.2
PDLIM5-202ENST00000318007 BST2Q10589 180 aaKnown RBP16.27■□□□□ 0.2
PDLIM5-202ENST00000318007 SLC8B1Q6J4K2 584 aa16.27■□□□□ 0.2
PDLIM5-202ENST00000318007 C4orf50Q6ZRC1 276 aa16.27■□□□□ 0.2
PDLIM5-202ENST00000318007 NDRG1Q92597 394 aaKnown RBP16.27■□□□□ 0.2
PDLIM5-202ENST00000318007 EIF3CQ99613 913 aaKnown RBP16.27■□□□□ 0.2
PDLIM5-202ENST00000318007 DUSP16Q9BY84 665 aa16.27■□□□□ 0.2
PDLIM5-202ENST00000318007 CYP4F11Q9HBI6 524 aa16.27■□□□□ 0.2
PDLIM5-202ENST00000318007 PPP2R2CQ9Y2T4 447 aa16.27■□□□□ 0.2
PDLIM5-202ENST00000318007 PCDHB5Q9Y5E4 795 aa16.27■□□□□ 0.2
PDLIM5-202ENST00000318007 C2orf71A6NGG8 1288 aa16.27■□□□□ 0.19
PDLIM5-202ENST00000318007 GOLGA8SH3BPF8 625 aa16.27■□□□□ 0.19
PDLIM5-202ENST00000318007 FAM163BP0C2L3 166 aa16.27■□□□□ 0.19
PDLIM5-202ENST00000318007 GALCP54803 685 aa16.27■□□□□ 0.19
PDLIM5-202ENST00000318007 GPR17Q13304 367 aa16.27■□□□□ 0.19
PDLIM5-202ENST00000318007 MAPRE1Q15691 268 aaKnown RBP16.27■□□□□ 0.19
PDLIM5-202ENST00000318007 ADGRD2Q7Z7M1 963 aa16.27■□□□□ 0.19
PDLIM5-202ENST00000318007 PIGZQ86VD9 579 aa16.27■□□□□ 0.19
PDLIM5-202ENST00000318007 ZMIZ2Q8NF64 920 aa16.27■□□□□ 0.19
PDLIM5-202ENST00000318007 SPATA18Q8TC71 538 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms