RNA–Protein interactions for RNA: ENST00000310421.4

VCPIP1-201, Transcript of valosin containing protein interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPIP1, Length 9,942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1-201ENST00000310421 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.76□□□□□ -0.53
VCPIP1-201ENST00000310421 LNPEPQ9UIQ6 1025 aa11.76□□□□□ -0.53
VCPIP1-201ENST00000310421 HLA-DRAP01903 254 aa11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 NMT1P30419 496 aaKnown RBP11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 RANBP1P43487 201 aa11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 CUL2Q13617 745 aa11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 PCSK7Q16549 785 aa11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 TFDP3Q5H9I0 405 aa11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 NLRP9Q7RTR0 991 aa11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 METTL16Q86W50 562 aaKnown RBP11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 CCDC60Q8IWA6 550 aaPredicted RBP11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 XPO6Q96QU8 1125 aaKnown RBP11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 SCN3BQ9NY72 215 aa11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 KANSL3Q9P2N6 904 aa11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 ATP11BQ9Y2G3 1177 aa11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 DAB1O75553 588 aa11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 RPN2P04844 631 aa11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 STIP1P31948 543 aaKnown RBP11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 PTPN21Q16825 1174 aa11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 COBLL1Q53SF7 1204 aa11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 ADSSL1Q8N142 457 aa11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 CPVLQ9H3G5 476 aa11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 TRPM5Q9NZQ8 1165 aa11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 PTPRMP28827 1452 aa11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 POLRMTO00411 1230 aaKnown RBP11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 FKBP9O95302 570 aa11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 PDHA1P08559 390 aa11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 PDGFRBP09619 1106 aa11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 FKBP9P1Q75LS8 142 aa11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 WNK4Q96J92 1243 aa11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 NPHS2Q9NP85 383 aa11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 FAM49BQ9NUQ9 324 aa11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 IMPAD1Q9NX62 359 aa11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 RRM2P31350 389 aa11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 PRIM2P49643 509 aa11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 HUNKP57058 714 aa11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 WLSQ5T9L3 541 aa11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 GPAT2Q6NUI2 795 aa11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 ATG9AQ7Z3C6 839 aa11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 MMGT1Q8N4V1 131 aa11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 TMA16Q96EY4 203 aaKnown RBP11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 TMEM117Q9H0C3 514 aa11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 ABI2Q9NYB9 513 aaPredicted RBP11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 ITGA9Q13797 1035 aa11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 SHC4Q6S5L8 630 aa11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 CYP4Z1Q86W10 505 aa11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 ZNF839A8K0R7 811 aa11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 NCK2O43639 380 aa11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 SOAT1P35610 550 aa11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 C19orf60Q96EN9 201 aa11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 TBC1D23Q9NUY8 699 aa11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 SLC39A10Q9ULF5 831 aa11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 SYNDIG1LA6NDD5 238 aa11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 TFRCP02786 760 aaKnown RBP11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 RAD23BP54727 409 aa11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 CDC42EP5Q6NZY7 148 aa11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 IRF1P10914 325 aa11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 CHRNA5P30532 468 aa11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 KDSRQ06136 332 aa11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 TRIP4Q15650 581 aaPredicted RBP11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 OSBPL8Q9BZF1 889 aa11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 POLE3Q9NRF9 147 aa11.75□□□□□ -0.53
VCPIP1-201ENST00000310421 PP2D1A8MPX8 630 aa11.74□□□□□ -0.53
VCPIP1-201ENST00000310421 ENO1P06733 434 aaKnown RBP11.74□□□□□ -0.53
VCPIP1-201ENST00000310421 GEMP55040 296 aa11.74□□□□□ -0.53
VCPIP1-201ENST00000310421 NFE2Q16621 373 aaPredicted RBP11.74□□□□□ -0.53
VCPIP1-201ENST00000310421 SKA1Q96BD8 255 aa11.74□□□□□ -0.53
VCPIP1-201ENST00000310421 TUBE1Q9UJT0 475 aa11.74□□□□□ -0.53
VCPIP1-201ENST00000310421 DEPDC5O75140 1603 aa11.74□□□□□ -0.53
VCPIP1-201ENST00000310421 KANSL1LA0AUZ9 987 aa11.74□□□□□ -0.53
VCPIP1-201ENST00000310421 CCDC159P0C7I6 412 aa11.74□□□□□ -0.53
VCPIP1-201ENST00000310421 DARSP14868 501 aaKnown RBP11.74□□□□□ -0.53
VCPIP1-201ENST00000310421 SOX6P35712 828 aa11.74□□□□□ -0.53
VCPIP1-201ENST00000310421 CDR2LQ86X02 465 aaPredicted RBP11.74□□□□□ -0.53
VCPIP1-201ENST00000310421 GAS2L3Q86XJ1 694 aa11.74□□□□□ -0.53
VCPIP1-201ENST00000310421 FBXO32Q969P5 355 aa11.74□□□□□ -0.53
VCPIP1-201ENST00000310421 ZNF333Q96JL9 665 aa11.74□□□□□ -0.53
VCPIP1-201ENST00000310421 CLPBQ9H078 707 aa11.74□□□□□ -0.53
VCPIP1-201ENST00000310421 MLXIPLQ9NP71 852 aa11.74□□□□□ -0.53
VCPIP1-201ENST00000310421 AMACRQ9UHK6 382 aa11.74□□□□□ -0.53
VCPIP1-201ENST00000310421 VPS51Q9UID3 782 aa11.74□□□□□ -0.53
VCPIP1-201ENST00000310421 RNF112Q9ULX5 631 aa11.74□□□□□ -0.53
VCPIP1-201ENST00000310421 ESYT3A0FGR9 886 aa11.74□□□□□ -0.53
VCPIP1-201ENST00000310421 DYNC1LI2O43237 492 aaPredicted RBP11.74□□□□□ -0.53
VCPIP1-201ENST00000310421 EN1Q05925 392 aaPredicted RBP11.74□□□□□ -0.53
VCPIP1-201ENST00000310421 CLEC17AQ6ZS10 378 aa11.74□□□□□ -0.53
VCPIP1-201ENST00000310421 KDELC2Q7Z4H8 507 aa11.74□□□□□ -0.53
VCPIP1-201ENST00000310421 STX7O15400 261 aaKnown RBP11.74□□□□□ -0.53
VCPIP1-201ENST00000310421 FBXO44Q9H4M3 255 aa11.74□□□□□ -0.53
VCPIP1-201ENST00000310421 RRN3Q9NYV6 651 aa11.74□□□□□ -0.53
VCPIP1-201ENST00000310421 LMBRD2Q68DH5 695 aaPredicted RBP11.74□□□□□ -0.53
VCPIP1-201ENST00000310421 ZNF507Q8TCN5 953 aa11.74□□□□□ -0.53
VCPIP1-201ENST00000310421 AGAP3Q96P47 875 aa11.74□□□□□ -0.53
VCPIP1-201ENST00000310421 USE1Q9NZ43 259 aa11.74□□□□□ -0.53
VCPIP1-201ENST00000310421 ITGA11Q9UKX5 1188 aa11.74□□□□□ -0.53
VCPIP1-201ENST00000310421 CKBP12277 381 aa11.74□□□□□ -0.53
VCPIP1-201ENST00000310421 CHI3L1P36222 383 aaPredicted RBP11.74□□□□□ -0.53
VCPIP1-201ENST00000310421 STX5Q13190 355 aa11.74□□□□□ -0.53
VCPIP1-201ENST00000310421 ZNF280DQ6N043 979 aa11.74□□□□□ -0.53
VCPIP1-201ENST00000310421 AGR3Q8TD06 166 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms