RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.36□□□□□ -1.23
PTCD2-201ENST00000308077 PEX26Q7Z412 305 aa7.36□□□□□ -1.23
PTCD2-201ENST00000308077 NECAB2Q7Z6G3 386 aa7.36□□□□□ -1.23
PTCD2-201ENST00000308077 ERICH1Q86X53 443 aa7.36□□□□□ -1.23
PTCD2-201ENST00000308077 SYCE1Q8N0S2 351 aa7.36□□□□□ -1.23
PTCD2-201ENST00000308077 B3GALNT2Q8NCR0 500 aa7.36□□□□□ -1.23
PTCD2-201ENST00000308077 HES6Q96HZ4 224 aa7.36□□□□□ -1.23
PTCD2-201ENST00000308077 CAPZA3Q96KX2 299 aa7.36□□□□□ -1.23
PTCD2-201ENST00000308077 RTP3Q9BQQ7 232 aa7.36□□□□□ -1.23
PTCD2-201ENST00000308077 CRTAC1Q9NQ79 661 aa7.36□□□□□ -1.23
PTCD2-201ENST00000308077 DDX43Q9NXZ2 648 aaKnown RBP7.36□□□□□ -1.23
PTCD2-201ENST00000308077 SMARCAL1Q9NZC9 954 aa7.36□□□□□ -1.23
PTCD2-201ENST00000308077 EHD2Q9NZN4 543 aa7.36□□□□□ -1.23
PTCD2-201ENST00000308077 ANAPC7Q9UJX3 599 aa7.36□□□□□ -1.23
PTCD2-201ENST00000308077 ALG6Q9Y672 507 aa7.36□□□□□ -1.23
PTCD2-201ENST00000308077 PTPRSQ13332 1948 aa7.36□□□□□ -1.23
PTCD2-201ENST00000308077 NLRC5Q86WI3 1866 aa7.36□□□□□ -1.23
PTCD2-201ENST00000308077 PI4K2BG5E9Z4 385 aa7.36□□□□□ -1.23
PTCD2-201ENST00000308077 PDE2AO00408 941 aaPredicted RBP7.36□□□□□ -1.23
PTCD2-201ENST00000308077 DDX3YO15523 660 aaKnown RBP7.36□□□□□ -1.23
PTCD2-201ENST00000308077 GABBR2O75899 941 aa7.36□□□□□ -1.23
PTCD2-201ENST00000308077 ODC1P11926 461 aa7.36□□□□□ -1.23
PTCD2-201ENST00000308077 PRLRP16471 622 aa7.36□□□□□ -1.23
PTCD2-201ENST00000308077 COMTP21964 271 aa7.36□□□□□ -1.23
PTCD2-201ENST00000308077 ADORA2BP29275 332 aa7.36□□□□□ -1.23
PTCD2-201ENST00000308077 GABRB2P47870 512 aa7.36□□□□□ -1.23
PTCD2-201ENST00000308077 CDR1P51861 262 aa7.36□□□□□ -1.23
PTCD2-201ENST00000308077 GSCP56915 257 aaPredicted RBP7.36□□□□□ -1.23
PTCD2-201ENST00000308077 RPL7AP62424 266 aaKnown RBP7.36□□□□□ -1.23
PTCD2-201ENST00000308077 TUBB2AQ13885 445 aa7.36□□□□□ -1.23
PTCD2-201ENST00000308077 WHAMMP3Q1A5X7 153 aa7.36□□□□□ -1.23
PTCD2-201ENST00000308077 PPP1R15BQ5SWA1 713 aa7.36□□□□□ -1.23
PTCD2-201ENST00000308077 PMF1Q6P1K2 205 aa7.36□□□□□ -1.23
PTCD2-201ENST00000308077 CNKSR3Q6P9H4 555 aa7.36□□□□□ -1.23
PTCD2-201ENST00000308077 DCLRE1AQ6PJP8 1040 aa7.36□□□□□ -1.23
PTCD2-201ENST00000308077 PAQR9Q6ZVX9 377 aa7.36□□□□□ -1.23
PTCD2-201ENST00000308077 XYLT1Q86Y38 959 aa7.36□□□□□ -1.23
PTCD2-201ENST00000308077 CREG2Q8IUH2 290 aa7.36□□□□□ -1.23
PTCD2-201ENST00000308077 NPAS4Q8IUM7 802 aa7.36□□□□□ -1.23
PTCD2-201ENST00000308077 TMEM86AQ8N2M4 240 aa7.36□□□□□ -1.23
PTCD2-201ENST00000308077 SLC2A14Q8TDB8 520 aa7.36□□□□□ -1.23
PTCD2-201ENST00000308077 RSPH1Q8WYR4 309 aa7.36□□□□□ -1.23
PTCD2-201ENST00000308077 SUSD3Q96L08 255 aa7.36□□□□□ -1.23
PTCD2-201ENST00000308077 CALR3Q96L12 384 aaKnown RBP7.36□□□□□ -1.23
PTCD2-201ENST00000308077 TUBB2BQ9BVA1 445 aa7.36□□□□□ -1.23
PTCD2-201ENST00000308077 NRDE2Q9H7Z3 1164 aa7.36□□□□□ -1.23
PTCD2-201ENST00000308077 PRDM5Q9NQX1 630 aaPredicted RBP7.36□□□□□ -1.23
PTCD2-201ENST00000308077 KANSL3Q9P2N6 904 aa7.36□□□□□ -1.23
PTCD2-201ENST00000308077 AMFRQ9UKV5 643 aa7.36□□□□□ -1.23
PTCD2-201ENST00000308077 LRFN2Q9ULH4 789 aa7.36□□□□□ -1.23
PTCD2-201ENST00000308077 SCINQ9Y6U3 715 aa7.36□□□□□ -1.23
PTCD2-201ENST00000308077 PTPRDP23468 1912 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 TMEM189-UBE2V1I3L0A0 370 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 PIK3R2O00459 728 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 CLDN5O00501 218 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 KIAA0355O15063 1070 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 TADA3O75528 432 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 TIMP1P01033 207 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 CYP11A1P05108 521 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 CSF2RAP15509 400 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 TCP1P17987 556 aaKnown RBP7.35□□□□□ -1.23
PTCD2-201ENST00000308077 PTPN1P18031 435 aaKnown RBP7.35□□□□□ -1.23
PTCD2-201ENST00000308077 RFC2P35250 354 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 OR1G1P47890 313 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 LHX1P48742 406 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 MARCKSL1P49006 195 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 RGS7P49802 495 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 RNASELQ05823 741 aaKnown RBP7.35□□□□□ -1.23
PTCD2-201ENST00000308077 PDE4CQ08493 712 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 ZNF252P-AS1Q0IIN9 211 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 RPS6KA1Q15418 735 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 MDH1BQ5I0G3 518 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 DCAF12L1Q5VU92 463 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 DAB2IPQ5VWQ8 1189 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 DNAJC24Q6P3W2 148 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 FAM43BQ6ZT52 329 aaPredicted RBP7.35□□□□□ -1.23
PTCD2-201ENST00000308077 FUKQ8N0W3 1084 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 ANKRD52Q8NB46 1076 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 C3orf20Q8ND61 904 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 FEZF2Q8TBJ5 459 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 SLC35F5Q8WV83 523 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 CD101Q93033 1021 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 TNIP3Q96KP6 325 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 FAM161BQ96MY7 647 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 SYT15Q9BQS2 421 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 PARVAQ9NVD7 372 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 PRG3Q9Y2Y8 225 aaPredicted RBP7.35□□□□□ -1.23
PTCD2-201ENST00000308077 VCANP13611 3396 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 MYBPHLA2RUH7 354 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 TMEM191CA6NGB0 347 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 TBKBP1A7MCY6 615 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 CYSRT1A8MQ03 144 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 E5RJQ4 531 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 GOLGA8SH3BPF8 625 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 NRP1O14786 923 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 CAPN2P17655 700 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 RBM10P98175 930 aaKnown RBP7.35□□□□□ -1.23
PTCD2-201ENST00000308077 OGDHQ02218 1023 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 BST2Q10589 180 aaKnown RBP7.35□□□□□ -1.23
PTCD2-201ENST00000308077 IKBKEQ14164 716 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms