RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 ALDH2P05091 517 aa13.54□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 ATP2A2P16615 1042 aaKnown RBP13.54□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 MAN1A1P33908 653 aa13.54□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 BRCC3P46736 316 aa13.54□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 BCAT1P54687 386 aa13.54□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 BCAR1P56945 870 aa13.54□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 CKAP4Q07065 602 aaKnown RBP13.54□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 MESDQ14696 234 aa13.54□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 SHHQ15465 462 aa13.54□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 GOLGA7BQ2TAP0 167 aa13.54□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 TMEM110Q86TL2 294 aa13.54□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 TMEM173Q86WV6 379 aaPredicted RBP13.54□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 METTL23Q86XA0 190 aa13.54□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 BCL7CQ8WUZ0 217 aaPredicted RBP13.54□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 CD101Q93033 1021 aa13.54□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 CPXM1Q96SM3 734 aa13.54□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 YME1L1Q96TA2 773 aa13.54□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 ACBD6Q9BR61 282 aa13.54□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 MTIF3Q9H2K0 278 aaKnown RBP13.54□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 DDX43Q9NXZ2 648 aaKnown RBP13.54□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 CHORDC1Q9UHD1 332 aaPredicted RBP13.54□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 ANAPC7Q9UJX3 599 aa13.54□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 PCDHB8Q9UN66 801 aa13.54□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 PRG3Q9Y2Y8 225 aaPredicted RBP13.54□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 TSC2P49815 1807 aa13.53□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 H0YGN5 161 aa13.53□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 I3L4J1 428 aa13.53□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 DDX3YO15523 660 aaKnown RBP13.53□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 TRAPPC3O43617 180 aa13.53□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 TADA3O75528 432 aa13.53□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 PROSCO94903 275 aa13.53□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 COMTP21964 271 aa13.53□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 CTNNA2P26232 953 aa13.53□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 PBX3P40426 434 aa13.53□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 PLCB3Q01970 1234 aa13.53□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 BST2Q10589 180 aaKnown RBP13.53□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 BTG3Q14201 252 aaPredicted RBP13.53□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 DNAJC24Q6P3W2 148 aa13.53□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 XYLT1Q86Y38 959 aa13.53□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 UBA3Q8TBC4 463 aa13.53□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 FNIP1Q8TF40 1166 aa13.53□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 HASPINQ8TF76 798 aa13.53□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 COG1Q8WTW3 980 aa13.53□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 HSFY1Q96LI6 401 aa13.53□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 RAD9AQ99638 391 aa13.53□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 COLEC11Q9BWP8 271 aa13.53□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 GOLPH3Q9H4A6 298 aa13.53□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 IP6K2Q9UHH9 426 aa13.53□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 TTC7AQ9ULT0 858 aaPredicted RBP13.53□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 FAN1Q9Y2M0 1017 aa13.53□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 INSL6Q9Y581 213 aa13.53□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 SZT2Q5T011 3432 aa13.53□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 HCRTO43612 131 aa13.53□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 SCNN1AP37088 669 aa13.53□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 PSMC1P62191 440 aaKnown RBP13.53□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 C2CD6Q53TS8 623 aa13.53□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 KIAA0319Q5VV43 1072 aa13.53□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 FAM171BQ6P995 826 aa13.53□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 ZDHHC17Q8IUH5 632 aa13.53□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 FUKQ8N0W3 1084 aa13.53□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 MYCBPAPQ8TBZ2 947 aa13.53□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 IPO4Q8TEX9 1081 aaKnown RBP13.53□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 RTP3Q9BQQ7 232 aa13.53□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 SYT15Q9BQS2 421 aa13.53□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 SELENOOQ9BVL4 669 aa13.53□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 DUSP16Q9BY84 665 aa13.53□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 UBXN6Q9BZV1 441 aa13.53□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 CARD9Q9H257 536 aa13.53□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 FAM49BQ9NUQ9 324 aa13.53□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 ADAM28Q9UKQ2 775 aa13.53□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 PCDHA3Q9Y5H8 950 aa13.53□□□□□ -0.24
SHANK2-AS3-201ENST00000307548 UQCRHLA0A096LP55 91 aa13.52□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 FAM170AA1A519 330 aa13.52□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 CCDC66A2RUB6 948 aa13.52□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 CTAGE15A4D2H0 777 aa13.52□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 NT5C1B-RDH14C9J2C7 533 aa13.52□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 SYN3O14994 580 aa13.52□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 ZNF185O15231 689 aa13.52□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 OAZ2O95190 189 aa13.52□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 ERBB2P04626 1255 aa13.52□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 UQCRHP07919 91 aa13.52□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 CTAGE8P0CG41 777 aa13.52□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 PAFAH1B1P43034 410 aa13.52□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 ACADSBP45954 432 aa13.52□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 PEX5P50542 639 aa13.52□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 PDE4CQ08493 712 aa13.52□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 CFAP221Q4G0U5 840 aa13.52□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 PMF1Q6P1K2 205 aa13.52□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 LLGL2Q6P1M3 1020 aa13.52□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 KCNT2Q6UVM3 1135 aa13.52□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 PAQR9Q6ZVX9 377 aa13.52□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 RSRC2Q7L4I2 434 aaKnown RBP13.52□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 CTAGE6Q86UF2 777 aa13.52□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 CTAGE4Q8IX94 777 aa13.52□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 RNF168Q8IYW5 571 aaPredicted RBP13.52□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 SLC39A11Q8N1S5 342 aa13.52□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 RASGEF1CQ8N431 466 aa13.52□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 UBL4BQ8N7F7 174 aa13.52□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 NIPA2Q8N8Q9 360 aa13.52□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 COLGALT1Q8NBJ5 622 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms