RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 MBTD1Q05BQ5 628 aa8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 TDGQ13569 410 aa8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 ALCAMQ13740 583 aa8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 EMC10Q5UCC4 262 aa8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 HS2ST1Q7LGA3 356 aa8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 SRLQ86TD4 932 aa8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 OLIG1Q8TAK6 271 aa8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 SMG7Q92540 1137 aaKnown RBP8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 RUFY1Q96T51 708 aa8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 GPR62Q9BZJ7 368 aa8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 EPB41L5Q9HCM4 733 aa8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 TTC7AQ9ULT0 858 aaPredicted RBP8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 PCDHB13Q9Y5F0 798 aa8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 CARNS1A5YM72 827 aa8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 CASTOR2A6NHX0 329 aa8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 F8VZ95 297 aa8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 PGRMC1O00264 195 aaKnown RBP8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 KCNK3O14649 394 aa8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 RAD51CO43502 376 aa8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 SH3BP5O60239 455 aa8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 DGAT1O75907 488 aa8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 TMEM253P0C7T8 217 aa8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 NMT1P30419 496 aaKnown RBP8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 ARL2P36404 184 aa8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 HSPA9P38646 679 aaKnown RBP8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 NOP2P46087 812 aaKnown RBP8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 CUL1Q13616 776 aa8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 ENOX2Q16206 610 aaKnown RBP8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 AMHR2Q16671 573 aa8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 KIAA0319Q5VV43 1072 aa8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 PRSS55Q6UWB4 352 aaPredicted RBP8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 C12orf56Q8IXR9 622 aa8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 HACE1Q8IYU2 909 aa8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 CASKIN2Q8WXE0 1202 aa8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 RSPH1Q8WYR4 309 aa8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 ZIM3Q96PE6 472 aa8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 KRT12Q99456 494 aa8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 PAAF1Q9BRP4 392 aa8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 HERC2P3Q9BVR0 1158 aa8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 ISCUQ9H1K1 167 aa8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 AGPAT3Q9NRZ7 376 aa8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 ANKEF1Q9NU02 776 aa8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 CA14Q9ULX7 337 aa8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 POLIQ9UNA4 740 aa8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 PACSIN2Q9UNF0 486 aaPredicted RBP8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 USTQ9Y2C2 406 aa8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 SSX2IPQ9Y2D8 614 aa8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 FRMD4BQ9Y2L6 1034 aa8.33□□□□□ -1.08
TM4SF1-201ENST00000305366 PLXNA4Q9HCM2 1894 aa8.32□□□□□ -1.08
TM4SF1-201ENST00000305366 TTLL13PA6NNM8 815 aa8.32□□□□□ -1.08
TM4SF1-201ENST00000305366 P4HA2O15460 535 aa8.32□□□□□ -1.08
TM4SF1-201ENST00000305366 TGM5O43548 720 aa8.32□□□□□ -1.08
TM4SF1-201ENST00000305366 AXLP30530 894 aa8.32□□□□□ -1.08
TM4SF1-201ENST00000305366 RARRES1P49788 294 aa8.32□□□□□ -1.08
TM4SF1-201ENST00000305366 SLC20A2Q08357 652 aa8.32□□□□□ -1.08
TM4SF1-201ENST00000305366 MAPK7Q13164 816 aa8.32□□□□□ -1.08
TM4SF1-201ENST00000305366 TTMPQ5BVD1 217 aa8.32□□□□□ -1.08
TM4SF1-201ENST00000305366 CFAP58Q5T655 872 aa8.32□□□□□ -1.08
TM4SF1-201ENST00000305366 FUT10Q6P4F1 479 aa8.32□□□□□ -1.08
TM4SF1-201ENST00000305366 LRIG3Q6UXM1 1119 aa8.32□□□□□ -1.08
TM4SF1-201ENST00000305366 GET4Q7L5D6 327 aaPredicted RBP8.32□□□□□ -1.08
TM4SF1-201ENST00000305366 ASCL5Q7RTU5 278 aa8.32□□□□□ -1.08
TM4SF1-201ENST00000305366 PEX26Q7Z412 305 aa8.32□□□□□ -1.08
TM4SF1-201ENST00000305366 NT5DC3Q86UY8 548 aa8.32□□□□□ -1.08
TM4SF1-201ENST00000305366 LNX1Q8TBB1 728 aaPredicted RBP8.32□□□□□ -1.08
TM4SF1-201ENST00000305366 RFFLQ8WZ73 363 aa8.32□□□□□ -1.08
TM4SF1-201ENST00000305366 HES6Q96HZ4 224 aa8.32□□□□□ -1.08
TM4SF1-201ENST00000305366 MYADMQ96S97 322 aa8.32□□□□□ -1.08
TM4SF1-201ENST00000305366 IRF2BPLQ9H1B7 796 aa8.32□□□□□ -1.08
TM4SF1-201ENST00000305366 CXCL16Q9H2A7 254 aa8.32□□□□□ -1.08
TM4SF1-201ENST00000305366 SLITRK6Q9H5Y7 841 aa8.32□□□□□ -1.08
TM4SF1-201ENST00000305366 SNTG2Q9NY99 539 aa8.32□□□□□ -1.08
TM4SF1-201ENST00000305366 DNAJC12Q9UKB3 198 aa8.32□□□□□ -1.08
TM4SF1-201ENST00000305366 NFU1Q9UMS0 254 aa8.32□□□□□ -1.08
TM4SF1-201ENST00000305366 GIT1Q9Y2X7 761 aa8.32□□□□□ -1.08
TM4SF1-201ENST00000305366 RRP15Q9Y3B9 282 aaKnown RBP8.32□□□□□ -1.08
TM4SF1-201ENST00000305366 LOXHD1Q8IVV2 1947 aa8.32□□□□□ -1.08
TM4SF1-201ENST00000305366 ZFHX2Q9C0A1 2572 aaPredicted RBP8.32□□□□□ -1.08
TM4SF1-201ENST00000305366 EVPLQ92817 2033 aa8.31□□□□□ -1.08
TM4SF1-201ENST00000305366 ARHGEF35A5YM69 484 aa8.31□□□□□ -1.08
TM4SF1-201ENST00000305366 SFI1A8K8P3 1242 aa8.31□□□□□ -1.08
TM4SF1-201ENST00000305366 MYO1CO00159 1063 aa8.31□□□□□ -1.08
TM4SF1-201ENST00000305366 MAPK13O15264 365 aa8.31□□□□□ -1.08
TM4SF1-201ENST00000305366 PMM2O15305 246 aa8.31□□□□□ -1.08
TM4SF1-201ENST00000305366 EIF3HO15372 352 aaKnown RBP eCLIP8.31□□□□□ -1.084e-7■■□□□ 13.4
TM4SF1-201ENST00000305366 CEP104O60308 925 aa8.31□□□□□ -1.08
TM4SF1-201ENST00000305366 LYPLA2O95372 231 aa8.31□□□□□ -1.08
TM4SF1-201ENST00000305366 FAM153BP0C7A2 387 aa8.31□□□□□ -1.08
TM4SF1-201ENST00000305366 NPR3P17342 541 aa8.31□□□□□ -1.08
TM4SF1-201ENST00000305366 IRAK1P51617 712 aa8.31□□□□□ -1.08
TM4SF1-201ENST00000305366 GALCP54803 685 aa8.31□□□□□ -1.08
TM4SF1-201ENST00000305366 HADHBP55084 474 aaKnown RBP8.31□□□□□ -1.08
TM4SF1-201ENST00000305366 SNRPFP62306 86 aaKnown RBP8.31□□□□□ -1.08
TM4SF1-201ENST00000305366 MRPS25P82663 173 aaKnown RBP8.31□□□□□ -1.08
TM4SF1-201ENST00000305366 DSG1Q02413 1049 aa8.31□□□□□ -1.08
TM4SF1-201ENST00000305366 DSC1Q08554 894 aa8.31□□□□□ -1.08
TM4SF1-201ENST00000305366 BFSP1Q12934 665 aa8.31□□□□□ -1.08
TM4SF1-201ENST00000305366 DRAP1Q14919 205 aaPredicted RBP8.31□□□□□ -1.08
TM4SF1-201ENST00000305366 TCEAL1Q15170 157 aa8.31□□□□□ -1.08
TM4SF1-201ENST00000305366 PPP2R5EQ16537 467 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms