RNA–Protein interactions for RNA: ENST00000304778.11

LONRF3-201, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene LONRF3, Length 2,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-201ENST00000304778 ABHD2P08910 425 aa16.96■□□□□ 0.31
LONRF3-201ENST00000304778 CD58P19256 250 aa16.96■□□□□ 0.31
LONRF3-201ENST00000304778 CUL2Q13617 745 aa16.96■□□□□ 0.31
LONRF3-201ENST00000304778 TTLL4Q14679 1199 aa16.96■□□□□ 0.31
LONRF3-201ENST00000304778 PLEKHA7Q6IQ23 1121 aa16.96■□□□□ 0.31
LONRF3-201ENST00000304778 CEP128Q6ZU80 1094 aa16.96■□□□□ 0.31
LONRF3-201ENST00000304778 ARMCX2Q7L311 632 aa16.96■□□□□ 0.31
LONRF3-201ENST00000304778 ABRAQ8N0Z2 381 aa16.96■□□□□ 0.31
LONRF3-201ENST00000304778 RIBC1Q8N443 379 aaPredicted RBP16.96■□□□□ 0.31
LONRF3-201ENST00000304778 ACO2Q99798 780 aaKnown RBP16.96■□□□□ 0.31
LONRF3-201ENST00000304778 FOXP3Q9BZS1 431 aa16.96■□□□□ 0.31
LONRF3-201ENST00000304778 CLEC11AQ9Y240 323 aa16.96■□□□□ 0.31
LONRF3-201ENST00000304778 TOM1L1O75674 476 aa16.95■□□□□ 0.3
LONRF3-201ENST00000304778 PRKCBP05771 671 aa16.95■□□□□ 0.3
LONRF3-201ENST00000304778 POTEJP0CG39 1038 aa16.95■□□□□ 0.3
LONRF3-201ENST00000304778 TPBGLP0DKB5 382 aa16.95■□□□□ 0.3
LONRF3-201ENST00000304778 GNA15P30679 374 aa16.95■□□□□ 0.3
LONRF3-201ENST00000304778 GJC1P36383 396 aa16.95■□□□□ 0.3
LONRF3-201ENST00000304778 LRRC23Q53EV4 343 aaPredicted RBP16.95■□□□□ 0.3
LONRF3-201ENST00000304778 GJC2Q5T442 439 aaPredicted RBP16.95■□□□□ 0.3
LONRF3-201ENST00000304778 PPP1R21Q6ZMI0 780 aa16.95■□□□□ 0.3
LONRF3-201ENST00000304778 ANKS1BQ7Z6G8 1248 aa16.95■□□□□ 0.3
LONRF3-201ENST00000304778 PHF13Q86YI8 300 aaPredicted RBP16.95■□□□□ 0.3
LONRF3-201ENST00000304778 APLFQ8IW19 511 aaPredicted RBP16.95■□□□□ 0.3
LONRF3-201ENST00000304778 ZCCHC9Q8N567 271 aaKnown RBP16.95■□□□□ 0.3
LONRF3-201ENST00000304778 STK32AQ8WU08 396 aa16.95■□□□□ 0.3
LONRF3-201ENST00000304778 RAB3IPQ96QF0 476 aaPredicted RBP16.95■□□□□ 0.3
LONRF3-201ENST00000304778 SMARCAD1Q9H4L7 1026 aa16.95■□□□□ 0.3
LONRF3-201ENST00000304778 ASB14A6NK59 587 aa16.95■□□□□ 0.3
LONRF3-201ENST00000304778 GAS2O43903 313 aaKnown RBP16.95■□□□□ 0.3
LONRF3-201ENST00000304778 FAM189A1O60320 539 aa16.95■□□□□ 0.3
LONRF3-201ENST00000304778 ZBTB8OSQ8IWT0 167 aa16.95■□□□□ 0.3
LONRF3-201ENST00000304778 PHC3Q8NDX5 983 aa16.95■□□□□ 0.3
LONRF3-201ENST00000304778 GPRC5AQ8NFJ5 357 aa16.95■□□□□ 0.3
LONRF3-201ENST00000304778 RBM15Q96T37 977 aaKnown RBP eCLIP16.95■□□□□ 0.3
LONRF3-201ENST00000304778 TLR3O15455 904 aaKnown RBP16.95■□□□□ 0.3
LONRF3-201ENST00000304778 GM2AP17900 193 aa16.95■□□□□ 0.3
LONRF3-201ENST00000304778 MAPK6Q16659 721 aa16.95■□□□□ 0.3
LONRF3-201ENST00000304778 P3H1Q32P28 736 aa16.95■□□□□ 0.3
LONRF3-201ENST00000304778 TMEM270Q6UE05 265 aa16.95■□□□□ 0.3
LONRF3-201ENST00000304778 GSTA5Q7RTV2 222 aa16.95■□□□□ 0.3
LONRF3-201ENST00000304778 NUDCD1Q96RS6 583 aa16.95■□□□□ 0.3
LONRF3-201ENST00000304778 RNPEPQ9H4A4 650 aa16.95■□□□□ 0.3
LONRF3-201ENST00000304778 USTQ9Y2C2 406 aa16.95■□□□□ 0.3
LONRF3-201ENST00000304778 NUB1Q9Y5A7 615 aa16.95■□□□□ 0.3
LONRF3-201ENST00000304778 PCDHB4Q9Y5E5 795 aa16.95■□□□□ 0.3
LONRF3-201ENST00000304778 PDHXO00330 501 aa16.94■□□□□ 0.3
LONRF3-201ENST00000304778 CCNB1P14635 433 aa16.94■□□□□ 0.3
LONRF3-201ENST00000304778 MAGEA4P43358 317 aa16.94■□□□□ 0.3
LONRF3-201ENST00000304778 LMNB2Q03252 620 aa16.94■□□□□ 0.3
LONRF3-201ENST00000304778 C1QBPQ07021 282 aaKnown RBP16.94■□□□□ 0.3
LONRF3-201ENST00000304778 MTFR1Q15390 333 aa16.94■□□□□ 0.3
LONRF3-201ENST00000304778 HP1BP3Q5SSJ5 553 aaPredicted RBP16.94■□□□□ 0.3
LONRF3-201ENST00000304778 MAP1SQ66K74 1059 aaPredicted RBP16.94■□□□□ 0.3
LONRF3-201ENST00000304778 ECHDC2Q86YB7 292 aa16.94■□□□□ 0.3
LONRF3-201ENST00000304778 BRSK2Q8IWQ3 736 aa16.94■□□□□ 0.3
LONRF3-201ENST00000304778 EXOC8Q8IYI6 725 aa16.94■□□□□ 0.3
LONRF3-201ENST00000304778 UCMAQ8WVF2 138 aa16.94■□□□□ 0.3
LONRF3-201ENST00000304778 DNAJC9Q8WXX5 260 aa16.94■□□□□ 0.3
LONRF3-201ENST00000304778 NLRP4Q96MN2 994 aa16.94■□□□□ 0.3
LONRF3-201ENST00000304778 RASA4BC9J798 803 aa16.94■□□□□ 0.3
LONRF3-201ENST00000304778 RASA4O43374 803 aa16.94■□□□□ 0.3
LONRF3-201ENST00000304778 UNC5CO95185 931 aa16.94■□□□□ 0.3
LONRF3-201ENST00000304778 TARSP26639 723 aaKnown RBP16.94■□□□□ 0.3
LONRF3-201ENST00000304778 CLCN3P51790 818 aa16.94■□□□□ 0.3
LONRF3-201ENST00000304778 NCOA4Q13772 614 aa16.94■□□□□ 0.3
LONRF3-201ENST00000304778 TMED2Q15363 201 aa16.94■□□□□ 0.3
LONRF3-201ENST00000304778 EFCAB12Q6NXP0 572 aa16.94■□□□□ 0.3
LONRF3-201ENST00000304778 PPP1R2P3Q6NXS1 205 aa16.94■□□□□ 0.3
LONRF3-201ENST00000304778 MRRFQ96E11 262 aaKnown RBP16.94■□□□□ 0.3
LONRF3-201ENST00000304778 IQCA1LA6NCM1 817 aa16.93■□□□□ 0.3
LONRF3-201ENST00000304778 HBP1O60381 514 aa16.93■□□□□ 0.3
LONRF3-201ENST00000304778 CST3P01034 146 aaPredicted RBP16.93■□□□□ 0.3
LONRF3-201ENST00000304778 PTDSS1P48651 473 aaKnown RBP16.93■□□□□ 0.3
LONRF3-201ENST00000304778 SLC26A2P50443 739 aa16.93■□□□□ 0.3
LONRF3-201ENST00000304778 NOP14P78316 857 aaKnown RBP16.93■□□□□ 0.3
LONRF3-201ENST00000304778 NFX1Q12986 1120 aaKnown RBP16.93■□□□□ 0.3
LONRF3-201ENST00000304778 TSNAXIP1Q2TAA8 658 aa16.93■□□□□ 0.3
LONRF3-201ENST00000304778 CYP4F22Q6NT55 531 aa16.93■□□□□ 0.3
LONRF3-201ENST00000304778 RBBP8NLQ8NC74 664 aaPredicted RBP16.93■□□□□ 0.3
LONRF3-201ENST00000304778 MAML1Q92585 1016 aa16.93■□□□□ 0.3
LONRF3-201ENST00000304778 GRAMD1AQ96CP6 724 aa16.93■□□□□ 0.3
LONRF3-201ENST00000304778 CFAP57Q96MR6 1250 aa16.93■□□□□ 0.3
LONRF3-201ENST00000304778 FAM47DPA6NHR8 397 aa16.93■□□□□ 0.3
LONRF3-201ENST00000304778 LIASO43766 372 aa16.93■□□□□ 0.3
LONRF3-201ENST00000304778 ADORA2AP29274 412 aa16.93■□□□□ 0.3
LONRF3-201ENST00000304778 FOXN2P32314 431 aa16.93■□□□□ 0.3
LONRF3-201ENST00000304778 SSTR3P32745 418 aaPredicted RBP16.93■□□□□ 0.3
LONRF3-201ENST00000304778 CETN2P41208 172 aa16.93■□□□□ 0.3
LONRF3-201ENST00000304778 ARHGAP1Q07960 439 aa16.93■□□□□ 0.3
LONRF3-201ENST00000304778 ZNF792Q3KQV3 632 aa16.93■□□□□ 0.3
LONRF3-201ENST00000304778 RNF43Q68DV7 783 aa16.93■□□□□ 0.3
LONRF3-201ENST00000304778 OR52E8Q6IFG1 317 aa16.93■□□□□ 0.3
LONRF3-201ENST00000304778 FEZF2Q8TBJ5 459 aa16.93■□□□□ 0.3
LONRF3-201ENST00000304778 MS4A4AQ96JQ5 239 aa16.93■□□□□ 0.3
LONRF3-201ENST00000304778 UBE2OQ9C0C9 1292 aaKnown RBP16.93■□□□□ 0.3
LONRF3-201ENST00000304778 C2orf40Q9H1Z8 148 aa16.93■□□□□ 0.3
LONRF3-201ENST00000304778 VCXQ9H320 206 aa16.93■□□□□ 0.3
LONRF3-201ENST00000304778 PARVAQ9NVD7 372 aa16.93■□□□□ 0.3
LONRF3-201ENST00000304778 KLHL14Q9P2G3 628 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms