RNA–Protein interactions for RNA: ENST00000304621.10

TTC39C-201, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TTC39C, Length 2,304 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-201ENST00000304621 FAM183BPQ6ZVS7 135 aa6.1□□□□□ -1.43
TTC39C-201ENST00000304621 LRRTM3Q86VH5 581 aa6.1□□□□□ -1.43
TTC39C-201ENST00000304621 TTC39CQ8N584 583 aa6.1□□□□□ -1.43
TTC39C-201ENST00000304621 ARFGAP1Q8N6T3 406 aa6.1□□□□□ -1.43
TTC39C-201ENST00000304621 EMC1Q8N766 993 aa6.1□□□□□ -1.43
TTC39C-201ENST00000304621 OR10T2Q8NGX3 314 aa6.1□□□□□ -1.43
TTC39C-201ENST00000304621 FEZF2Q8TBJ5 459 aa6.1□□□□□ -1.43
TTC39C-201ENST00000304621 URGCPQ8TCY9 931 aa6.1□□□□□ -1.43
TTC39C-201ENST00000304621 CLEC4CQ8WTT0 213 aa6.1□□□□□ -1.43
TTC39C-201ENST00000304621 KHSRPQ92945 711 aaKnown RBP eCLIP6.1□□□□□ -1.43
TTC39C-201ENST00000304621 TRIM11Q96F44 468 aa6.1□□□□□ -1.43
TTC39C-201ENST00000304621 DDX27Q96GQ7 796 aaKnown RBP6.1□□□□□ -1.43
TTC39C-201ENST00000304621 SUSD3Q96L08 255 aa6.1□□□□□ -1.43
TTC39C-201ENST00000304621 B3GALT6Q96L58 329 aa6.1□□□□□ -1.43
TTC39C-201ENST00000304621 PKMYT1Q99640 499 aa6.1□□□□□ -1.43
TTC39C-201ENST00000304621 SYT15Q9BQS2 421 aa6.1□□□□□ -1.43
TTC39C-201ENST00000304621 PRDM5Q9NQX1 630 aaPredicted RBP6.1□□□□□ -1.43
TTC39C-201ENST00000304621 METTL5Q9NRN9 209 aaKnown RBP6.1□□□□□ -1.43
TTC39C-201ENST00000304621 MARCH5Q9NX47 278 aa6.1□□□□□ -1.43
TTC39C-201ENST00000304621 KIAA1257Q9ULG3 409 aa6.1□□□□□ -1.43
TTC39C-201ENST00000304621 PTPRSQ13332 1948 aa6.1□□□□□ -1.43
TTC39C-201ENST00000304621 TBKBP1A7MCY6 615 aa6.1□□□□□ -1.43
TTC39C-201ENST00000304621 NT5C1B-RDH14C9J2C7 533 aa6.1□□□□□ -1.43
TTC39C-201ENST00000304621 UPP2O95045 317 aa6.1□□□□□ -1.43
TTC39C-201ENST00000304621 CYP11A1P05108 521 aa6.1□□□□□ -1.43
TTC39C-201ENST00000304621 CALB1P05937 261 aa6.1□□□□□ -1.43
TTC39C-201ENST00000304621 OR4Q2P0C623 313 aa6.1□□□□□ -1.43
TTC39C-201ENST00000304621 ODC1P11926 461 aa6.1□□□□□ -1.43
TTC39C-201ENST00000304621 TCP1P17987 556 aaKnown RBP6.1□□□□□ -1.43
TTC39C-201ENST00000304621 RFC1P35251 1148 aaPredicted RBP6.1□□□□□ -1.43
TTC39C-201ENST00000304621 PEX5P50542 639 aa6.1□□□□□ -1.43
TTC39C-201ENST00000304621 GSCP56915 257 aaPredicted RBP6.1□□□□□ -1.43
TTC39C-201ENST00000304621 DEFB103AP81534 67 aa6.1□□□□□ -1.43
TTC39C-201ENST00000304621 MRPS25P82663 173 aaKnown RBP6.1□□□□□ -1.43
TTC39C-201ENST00000304621 TXNRD3NBQ6F5E7 133 aa6.1□□□□□ -1.43
TTC39C-201ENST00000304621 DNAJC24Q6P3W2 148 aa6.1□□□□□ -1.43
TTC39C-201ENST00000304621 ZNF572Q7Z3I7 529 aaPredicted RBP6.1□□□□□ -1.43
TTC39C-201ENST00000304621 ANKS1BQ7Z6G8 1248 aa6.1□□□□□ -1.43
TTC39C-201ENST00000304621 NPAS4Q8IUM7 802 aa6.1□□□□□ -1.43
TTC39C-201ENST00000304621 SYCE1Q8N0S2 351 aa6.1□□□□□ -1.43
TTC39C-201ENST00000304621 C3orf20Q8ND61 904 aa6.1□□□□□ -1.43
TTC39C-201ENST00000304621 MNS1Q8NEH6 495 aa6.1□□□□□ -1.43
TTC39C-201ENST00000304621 NDRG1Q92597 394 aaKnown RBP6.1□□□□□ -1.43
TTC39C-201ENST00000304621 MCRS1Q96EZ8 462 aa6.1□□□□□ -1.43
TTC39C-201ENST00000304621 PCED1BQ96HM7 432 aa6.1□□□□□ -1.43
TTC39C-201ENST00000304621 UROC1Q96N76 676 aa6.1□□□□□ -1.43
TTC39C-201ENST00000304621 HNRNPABQ99729 332 aaKnown RBP6.1□□□□□ -1.43
TTC39C-201ENST00000304621 HERPUD2Q9BSE4 406 aa6.1□□□□□ -1.43
TTC39C-201ENST00000304621 SLC4A5Q9BY07 1137 aa6.1□□□□□ -1.43
TTC39C-201ENST00000304621 ST7Q9NRC1 585 aa6.1□□□□□ -1.43
TTC39C-201ENST00000304621 PARVAQ9NVD7 372 aa6.1□□□□□ -1.43
TTC39C-201ENST00000304621 NR2E1Q9Y466 385 aa6.1□□□□□ -1.43
TTC39C-201ENST00000304621 NLRC5Q86WI3 1866 aa6.1□□□□□ -1.43
TTC39C-201ENST00000304621 TTC3P53804 2025 aa6.09□□□□□ -1.43
TTC39C-201ENST00000304621 SIGLEC16A6NMB1 481 aa6.09□□□□□ -1.43
TTC39C-201ENST00000304621 F8VP50 259 aa6.09□□□□□ -1.43
TTC39C-201ENST00000304621 NRP1O14786 923 aa6.09□□□□□ -1.43
TTC39C-201ENST00000304621 KIAA0355O15063 1070 aa6.09□□□□□ -1.43
TTC39C-201ENST00000304621 PAPSS1O43252 624 aaPredicted RBP6.09□□□□□ -1.43
TTC39C-201ENST00000304621 GRAP2O75791 330 aa6.09□□□□□ -1.43
TTC39C-201ENST00000304621 PROSCO94903 275 aa6.09□□□□□ -1.43
TTC39C-201ENST00000304621 TIMP1P01033 207 aa6.09□□□□□ -1.43
TTC39C-201ENST00000304621 CTNNA2P26232 953 aa6.09□□□□□ -1.43
TTC39C-201ENST00000304621 CTNNA1P35221 906 aaKnown RBP6.09□□□□□ -1.43
TTC39C-201ENST00000304621 RNASELQ05823 741 aaKnown RBP6.09□□□□□ -1.43
TTC39C-201ENST00000304621 TUBB2AQ13885 445 aa6.09□□□□□ -1.43
TTC39C-201ENST00000304621 ATP13A4Q4VNC1 1196 aa6.09□□□□□ -1.43
TTC39C-201ENST00000304621 TEX35Q5T0J7 233 aa6.09□□□□□ -1.43
TTC39C-201ENST00000304621 SH3PXD2AQ5TCZ1 1133 aa6.09□□□□□ -1.43
TTC39C-201ENST00000304621 CNKSR3Q6P9H4 555 aa6.09□□□□□ -1.43
TTC39C-201ENST00000304621 OLFML1Q6UWY5 402 aa6.09□□□□□ -1.43
TTC39C-201ENST00000304621 C16orf59Q7L2K0 433 aa6.09□□□□□ -1.43
TTC39C-201ENST00000304621 TAS1R1Q7RTX1 841 aa6.09□□□□□ -1.43
TTC39C-201ENST00000304621 GPRIN1Q7Z2K8 1008 aa6.09□□□□□ -1.43
TTC39C-201ENST00000304621 NECAB2Q7Z6G3 386 aa6.09□□□□□ -1.43
TTC39C-201ENST00000304621 ZDHHC14Q8IZN3 488 aa6.09□□□□□ -1.43
TTC39C-201ENST00000304621 TMEM86AQ8N2M4 240 aa6.09□□□□□ -1.43
TTC39C-201ENST00000304621 ANKRD52Q8NB46 1076 aa6.09□□□□□ -1.43
TTC39C-201ENST00000304621 ZMIZ2Q8NF64 920 aa6.09□□□□□ -1.43
TTC39C-201ENST00000304621 C18orf8Q96DM3 657 aa6.09□□□□□ -1.43
TTC39C-201ENST00000304621 SMOQ99835 787 aa6.09□□□□□ -1.43
TTC39C-201ENST00000304621 TUBB2BQ9BVA1 445 aa6.09□□□□□ -1.43
TTC39C-201ENST00000304621 ADAM33Q9BZ11 813 aa6.09□□□□□ -1.43
TTC39C-201ENST00000304621 GPR62Q9BZJ7 368 aa6.09□□□□□ -1.43
TTC39C-201ENST00000304621 LRFN2Q9ULH4 789 aa6.09□□□□□ -1.43
TTC39C-201ENST00000304621 USTQ9Y2C2 406 aa6.09□□□□□ -1.43
TTC39C-201ENST00000304621 CEP83Q9Y592 693 aa6.09□□□□□ -1.43
TTC39C-201ENST00000304621 VWA8A3KMH1 1905 aa6.09□□□□□ -1.43
TTC39C-201ENST00000304621 TCRBV7S2A1N4TA0A589 114 aa6.09□□□□□ -1.43
TTC39C-201ENST00000304621 HHLA1C9JL84 531 aa6.09□□□□□ -1.43
TTC39C-201ENST00000304621 TMEM189-UBE2V1I3L0A0 370 aa6.09□□□□□ -1.43
TTC39C-201ENST00000304621 SPOPO43791 374 aa6.09□□□□□ -1.43
TTC39C-201ENST00000304621 CEP104O60308 925 aa6.09□□□□□ -1.43
TTC39C-201ENST00000304621 GALTP07902 379 aa6.09□□□□□ -1.43
TTC39C-201ENST00000304621 FAM163BP0C2L3 166 aa6.09□□□□□ -1.43
TTC39C-201ENST00000304621 PYGMP11217 842 aa6.09□□□□□ -1.43
TTC39C-201ENST00000304621 LCP1P13796 627 aa6.09□□□□□ -1.43
TTC39C-201ENST00000304621 TFE3P19532 575 aaPredicted RBP6.09□□□□□ -1.43
TTC39C-201ENST00000304621 LHX1P48742 406 aa6.09□□□□□ -1.43
TTC39C-201ENST00000304621 RPL34P49207 117 aaKnown RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms