RNA–Protein interactions for RNA: ENST00000304514.11

RGPD3-201, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RGPD3, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-201ENST00000304514 RAB6CQ53S08 254 aa7.58□□□□□ -1.2
RGPD3-201ENST00000304514 BBS12Q6ZW61 710 aa7.58□□□□□ -1.2
RGPD3-201ENST00000304514 AGGF1Q8N302 714 aaeCLIP7.58□□□□□ -1.2
RGPD3-201ENST00000304514 TMEM176AQ96HP8 235 aa7.58□□□□□ -1.2
RGPD3-201ENST00000304514 RAB6CQ9H0N0 254 aa7.58□□□□□ -1.2
RGPD3-201ENST00000304514 ZWILCHQ9H900 591 aa7.58□□□□□ -1.2
RGPD3-201ENST00000304514 CD248Q9HCU0 757 aa7.58□□□□□ -1.2
RGPD3-201ENST00000304514 STARD13Q9Y3M8 1113 aa7.58□□□□□ -1.2
RGPD3-201ENST00000304514 DPYSL4O14531 572 aa7.58□□□□□ -1.2
RGPD3-201ENST00000304514 RPA3P35244 121 aaPredicted RBP7.58□□□□□ -1.2
RGPD3-201ENST00000304514 GPD2P43304 727 aa7.58□□□□□ -1.2
RGPD3-201ENST00000304514 CTCFP49711 727 aaPredicted RBP7.58□□□□□ -1.2
RGPD3-201ENST00000304514 TFAMQ00059 246 aaKnown RBP7.58□□□□□ -1.2
RGPD3-201ENST00000304514 EFHC2Q5JST6 749 aa7.58□□□□□ -1.2
RGPD3-201ENST00000304514 MARCH8Q5T0T0 291 aa7.58□□□□□ -1.2
RGPD3-201ENST00000304514 SPATA21Q7Z572 469 aa7.58□□□□□ -1.2
RGPD3-201ENST00000304514 MAK16Q9BXY0 300 aaKnown RBP7.58□□□□□ -1.2
RGPD3-201ENST00000304514 CXCL16Q9H2A7 254 aa7.58□□□□□ -1.2
RGPD3-201ENST00000304514 PPCSQ9HAB8 311 aa7.58□□□□□ -1.2
RGPD3-201ENST00000304514 TBK1Q9UHD2 729 aa7.58□□□□□ -1.2
RGPD3-201ENST00000304514 CXCL11O14625 94 aa7.57□□□□□ -1.2
RGPD3-201ENST00000304514 HBP1O60381 514 aa7.57□□□□□ -1.2
RGPD3-201ENST00000304514 ITGB3P05106 788 aa7.57□□□□□ -1.2
RGPD3-201ENST00000304514 FGFR1P11362 822 aa7.57□□□□□ -1.2
RGPD3-201ENST00000304514 ACAP1Q15027 740 aa7.57□□□□□ -1.2
RGPD3-201ENST00000304514 PKN2Q16513 984 aaKnown RBP7.57□□□□□ -1.2
RGPD3-201ENST00000304514 ZNF484Q5JVG2 852 aa7.57□□□□□ -1.2
RGPD3-201ENST00000304514 ADGRD1Q6QNK2 874 aa7.57□□□□□ -1.2
RGPD3-201ENST00000304514 MTHFD1LQ6UB35 978 aa7.57□□□□□ -1.2
RGPD3-201ENST00000304514 RTP4Q96DX8 246 aa7.57□□□□□ -1.2
RGPD3-201ENST00000304514 C11orf84Q9BUA3 381 aaPredicted RBP7.57□□□□□ -1.2
RGPD3-201ENST00000304514 RPF1Q9H9Y2 349 aaKnown RBP7.57□□□□□ -1.2
RGPD3-201ENST00000304514 SLC24A2Q9UI40 661 aa7.57□□□□□ -1.2
RGPD3-201ENST00000304514 FAM47DPA6NHR8 397 aa7.57□□□□□ -1.2
RGPD3-201ENST00000304514 TSPAN1O60635 241 aa7.57□□□□□ -1.2
RGPD3-201ENST00000304514 VIMP08670 466 aaKnown RBP7.57□□□□□ -1.2
RGPD3-201ENST00000304514 KRT3P12035 628 aa7.57□□□□□ -1.2
RGPD3-201ENST00000304514 HOXD8P13378 290 aaPredicted RBP7.57□□□□□ -1.2
RGPD3-201ENST00000304514 CLCN3P51790 818 aa7.57□□□□□ -1.2
RGPD3-201ENST00000304514 CDH8P55286 799 aa7.57□□□□□ -1.2
RGPD3-201ENST00000304514 DPYSL3Q14195 570 aa7.57□□□□□ -1.2
RGPD3-201ENST00000304514 PPP1R21Q6ZMI0 780 aa7.57□□□□□ -1.2
RGPD3-201ENST00000304514 ARHGEF18Q6ZSZ5 1173 aa7.57□□□□□ -1.2
RGPD3-201ENST00000304514 SH2D5Q6ZV89 423 aa7.57□□□□□ -1.2
RGPD3-201ENST00000304514 FAM183BPQ6ZVS7 135 aa7.57□□□□□ -1.2
RGPD3-201ENST00000304514 ZBED8Q8IZ13 594 aa7.57□□□□□ -1.2
RGPD3-201ENST00000304514 CMASQ8NFW8 434 aaPredicted RBP7.57□□□□□ -1.2
RGPD3-201ENST00000304514 PPTC7Q8NI37 304 aa7.57□□□□□ -1.2
RGPD3-201ENST00000304514 RXFP1Q9HBX9 757 aa7.57□□□□□ -1.2
RGPD3-201ENST00000304514 ITGA11Q9UKX5 1188 aa7.57□□□□□ -1.2
RGPD3-201ENST00000304514 SGK1O00141 431 aa7.57□□□□□ -1.2
RGPD3-201ENST00000304514 TSHRP16473 764 aa7.57□□□□□ -1.2
RGPD3-201ENST00000304514 RPL34P49207 117 aaKnown RBP7.57□□□□□ -1.2
RGPD3-201ENST00000304514 ZNF143P52747 638 aaPredicted RBP7.57□□□□□ -1.2
RGPD3-201ENST00000304514 GEMIN4P57678 1058 aaKnown RBP7.57□□□□□ -1.2
RGPD3-201ENST00000304514 OSTNP61366 133 aa7.57□□□□□ -1.2
RGPD3-201ENST00000304514 KCNT1Q5JUK3 1230 aa7.57□□□□□ -1.2
RGPD3-201ENST00000304514 SH3PXD2AQ5TCZ1 1133 aa7.57□□□□□ -1.2
RGPD3-201ENST00000304514 SHCBP1Q8NEM2 672 aa7.57□□□□□ -1.2
RGPD3-201ENST00000304514 OTUD5Q96G74 571 aa7.57□□□□□ -1.2
RGPD3-201ENST00000304514 MPHOSPH6Q99547 160 aaKnown RBP7.57□□□□□ -1.2
RGPD3-201ENST00000304514 ECT2Q9H8V3 914 aa7.57□□□□□ -1.2
RGPD3-201ENST00000304514 MLXIPLQ9NP71 852 aa7.57□□□□□ -1.2
RGPD3-201ENST00000304514 FRMPD3Q5JV73 1810 aa7.57□□□□□ -1.2
RGPD3-201ENST00000304514 LRRD1A4D1F6 860 aa7.57□□□□□ -1.2
RGPD3-201ENST00000304514 RPL22P35268 128 aaKnown RBP7.57□□□□□ -1.2
RGPD3-201ENST00000304514 SSR1P43307 286 aaKnown RBP7.57□□□□□ -1.2
RGPD3-201ENST00000304514 PSMC1P62191 440 aaKnown RBP7.57□□□□□ -1.2
RGPD3-201ENST00000304514 TNFAIP2Q03169 654 aa7.57□□□□□ -1.2
RGPD3-201ENST00000304514 PTPN11Q06124 597 aaPredicted RBP7.57□□□□□ -1.2
RGPD3-201ENST00000304514 DCUN1D2Q6PH85 259 aa7.57□□□□□ -1.2
RGPD3-201ENST00000304514 ALKAL1Q6UXT8 129 aa7.57□□□□□ -1.2
RGPD3-201ENST00000304514 IGDCC3Q8IVU1 814 aa7.57□□□□□ -1.2
RGPD3-201ENST00000304514 UNC45BQ8IWX7 931 aa7.57□□□□□ -1.2
RGPD3-201ENST00000304514 SRRM1Q8IYB3 904 aaKnown RBP7.57□□□□□ -1.2
RGPD3-201ENST00000304514 ANKRD42Q8N9B4 389 aa7.57□□□□□ -1.2
RGPD3-201ENST00000304514 PIWIL1Q96J94 861 aaKnown RBP7.57□□□□□ -1.2
RGPD3-201ENST00000304514 KIF9Q9HAQ2 790 aa7.57□□□□□ -1.2
RGPD3-201ENST00000304514 CYP3A43Q9HB55 503 aa7.57□□□□□ -1.2
RGPD3-201ENST00000304514 PNMA3Q9UL41 463 aa7.57□□□□□ -1.2
RGPD3-201ENST00000304514 ZNF148Q9UQR1 794 aa7.57□□□□□ -1.2
RGPD3-201ENST00000304514 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.57□□□□□ -1.2
RGPD3-201ENST00000304514 NLRC5Q86WI3 1866 aa7.57□□□□□ -1.2
RGPD3-201ENST00000304514 C2CD4BA6NLJ0 364 aa7.56□□□□□ -1.2
RGPD3-201ENST00000304514 RASA4BC9J798 803 aa7.56□□□□□ -1.2
RGPD3-201ENST00000304514 APOC4-APOC2K7ER74 178 aa7.56□□□□□ -1.2
RGPD3-201ENST00000304514 RASA4O43374 803 aa7.56□□□□□ -1.2
RGPD3-201ENST00000304514 TMEM63AO94886 807 aa7.56□□□□□ -1.2
RGPD3-201ENST00000304514 APOC2P02655 101 aa7.56□□□□□ -1.2
RGPD3-201ENST00000304514 LGALS2P05162 132 aa7.56□□□□□ -1.2
RGPD3-201ENST00000304514 KRT7P08729 469 aa7.56□□□□□ -1.2
RGPD3-201ENST00000304514 PCK1P35558 622 aa7.56□□□□□ -1.2
RGPD3-201ENST00000304514 IREB2P48200 963 aaKnown RBP7.56□□□□□ -1.2
RGPD3-201ENST00000304514 SLC10A6Q3KNW5 377 aa7.56□□□□□ -1.2
RGPD3-201ENST00000304514 CCDC14Q49A88 953 aa7.56□□□□□ -1.2
RGPD3-201ENST00000304514 NPNTQ6UXI9 565 aa7.56□□□□□ -1.2
RGPD3-201ENST00000304514 FITM2Q8N6M3 262 aa7.56□□□□□ -1.2
RGPD3-201ENST00000304514 SGSM3Q96HU1 749 aa7.56□□□□□ -1.2
RGPD3-201ENST00000304514 NLRP4Q96MN2 994 aa7.56□□□□□ -1.2
RGPD3-201ENST00000304514 C16orf70Q9BSU1 422 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms