RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 CD72P21854 359 aa28.18■■■□□ 2.1
CDKN2A-201ENST00000304494 PRCPP42785 496 aa28.18■■■□□ 2.1
CDKN2A-201ENST00000304494 MAGEA9P43362 315 aa28.18■■■□□ 2.1
CDKN2A-201ENST00000304494 ANGPT1Q15389 498 aa28.18■■■□□ 2.1
CDKN2A-201ENST00000304494 ARHGAP29Q52LW3 1261 aa28.18■■■□□ 2.1
CDKN2A-201ENST00000304494 SCARA5Q6ZMJ2 495 aa28.18■■■□□ 2.1
CDKN2A-201ENST00000304494 MON1AQ86VX9 555 aa28.18■■■□□ 2.1
CDKN2A-201ENST00000304494 GPIHBP1Q8IV16 184 aa28.18■■■□□ 2.1
CDKN2A-201ENST00000304494 MAB21L3Q8N8X9 362 aa28.18■■■□□ 2.1
CDKN2A-201ENST00000304494 BPIFB1Q8TDL5 484 aa28.18■■■□□ 2.1
CDKN2A-201ENST00000304494 TNIP3Q96KP6 325 aa28.18■■■□□ 2.1
CDKN2A-201ENST00000304494 TSG101Q99816 390 aa28.18■■■□□ 2.1
CDKN2A-201ENST00000304494 IMPG2Q9BZV3 1241 aa28.18■■■□□ 2.1
CDKN2A-201ENST00000304494 ELOVL4Q9GZR5 314 aa28.18■■■□□ 2.1
CDKN2A-201ENST00000304494 THG1LQ9NWX6 298 aaKnown RBP28.18■■■□□ 2.1
CDKN2A-201ENST00000304494 ARNTLO00327 626 aa28.17■■■□□ 2.1
CDKN2A-201ENST00000304494 CETN3O15182 167 aa28.17■■■□□ 2.1
CDKN2A-201ENST00000304494 ASS1P00966 412 aaKnown RBP28.17■■■□□ 2.1
CDKN2A-201ENST00000304494 MLLT6P55198 1093 aaPredicted RBP28.17■■■□□ 2.1
CDKN2A-201ENST00000304494 CDH8P55286 799 aa28.17■■■□□ 2.1
CDKN2A-201ENST00000304494 MSANTD3Q96H12 275 aa28.17■■■□□ 2.1
CDKN2A-201ENST00000304494 FAM86C1Q9NVL1 165 aa28.17■■■□□ 2.1
CDKN2A-201ENST00000304494 PIAS3Q9Y6X2 628 aa28.17■■■□□ 2.1
CDKN2A-201ENST00000304494 HLA-DRAP01903 254 aa28.16■■■□□ 2.1
CDKN2A-201ENST00000304494 TRIM49P0CI25 452 aa28.16■■■□□ 2.1
CDKN2A-201ENST00000304494 TRIM49CP0CI26 452 aa28.16■■■□□ 2.1
CDKN2A-201ENST00000304494 EPB41P11171 864 aaKnown RBP28.16■■■□□ 2.1
CDKN2A-201ENST00000304494 GTF2H1P32780 548 aa28.16■■■□□ 2.1
CDKN2A-201ENST00000304494 RAP1GAPP47736 663 aa28.16■■■□□ 2.1
CDKN2A-201ENST00000304494 MRE11P49959 708 aa28.16■■■□□ 2.1
CDKN2A-201ENST00000304494 PLCB2Q00722 1185 aa28.16■■■□□ 2.1
CDKN2A-201ENST00000304494 TXNDC8Q6A555 127 aa28.16■■■□□ 2.1
CDKN2A-201ENST00000304494 DENND5BQ6ZUT9 1274 aa28.16■■■□□ 2.1
CDKN2A-201ENST00000304494 ALYREFQ86V81 257 aaKnown RBP28.16■■■□□ 2.1
CDKN2A-201ENST00000304494 C8orf48Q96LL4 319 aa28.16■■■□□ 2.1
CDKN2A-201ENST00000304494 KIF9Q9HAQ2 790 aa28.16■■■□□ 2.1
CDKN2A-201ENST00000304494 MTF2Q9Y483 593 aaPredicted RBP28.16■■■□□ 2.1
CDKN2A-201ENST00000304494 COL4A3Q01955 1670 aa28.16■■■□□ 2.1
CDKN2A-201ENST00000304494 ATP8B3O60423 1300 aa28.16■■■□□ 2.1
CDKN2A-201ENST00000304494 GCLMP48507 274 aa28.15■■■□□ 2.1
CDKN2A-201ENST00000304494 C1orf228Q6PIY5 440 aa28.15■■■□□ 2.1
CDKN2A-201ENST00000304494 ERCC4Q92889 916 aaPredicted RBP28.15■■■□□ 2.1
CDKN2A-201ENST00000304494 LRRC3BQ96PB8 259 aa28.15■■■□□ 2.1
CDKN2A-201ENST00000304494 PHOX2BQ99453 314 aa28.15■■■□□ 2.1
CDKN2A-201ENST00000304494 SMG9Q9H0W8 520 aaKnown RBP28.15■■■□□ 2.1
CDKN2A-201ENST00000304494 TMEM8AQ9HCN3 771 aa28.15■■■□□ 2.1
CDKN2A-201ENST00000304494 TDP1Q9NUW8 608 aa28.15■■■□□ 2.1
CDKN2A-201ENST00000304494 STX10O60499 249 aa28.14■■■□□ 2.1
CDKN2A-201ENST00000304494 LRRN2O75325 713 aa28.14■■■□□ 2.1
CDKN2A-201ENST00000304494 TADA3O75528 432 aa28.14■■■□□ 2.1
CDKN2A-201ENST00000304494 TRIM21P19474 475 aaKnown RBP28.14■■■□□ 2.1
CDKN2A-201ENST00000304494 TARSP26639 723 aaKnown RBP28.14■■■□□ 2.1
CDKN2A-201ENST00000304494 MCCD1P59942 119 aaPredicted RBP28.14■■■□□ 2.1
CDKN2A-201ENST00000304494 PPP3CAQ08209 521 aa28.14■■■□□ 2.1
CDKN2A-201ENST00000304494 STIM1Q13586 685 aa28.14■■■□□ 2.1
CDKN2A-201ENST00000304494 CCDC150Q8NCX0 1101 aa28.14■■■□□ 2.1
CDKN2A-201ENST00000304494 FAM3CQ92520 227 aa28.14■■■□□ 2.1
CDKN2A-201ENST00000304494 ELMO3Q96BJ8 720 aa28.14■■■□□ 2.1
CDKN2A-201ENST00000304494 B3GNT5Q9BYG0 378 aa28.14■■■□□ 2.1
CDKN2A-201ENST00000304494 SDCBP2Q9H190 292 aa28.14■■■□□ 2.1
CDKN2A-201ENST00000304494 COL4A2P08572 1712 aa28.14■■■□□ 2.1
CDKN2A-201ENST00000304494 F8VP50 259 aa28.13■■■□□ 2.09
CDKN2A-201ENST00000304494 PPP1R2P41236 205 aa28.13■■■□□ 2.09
CDKN2A-201ENST00000304494 ASPAP45381 313 aa28.13■■■□□ 2.09
CDKN2A-201ENST00000304494 KPNA1P52294 538 aaPredicted RBP28.13■■■□□ 2.09
CDKN2A-201ENST00000304494 NOP14P78316 857 aaKnown RBP28.13■■■□□ 2.09
CDKN2A-201ENST00000304494 FKBP3Q00688 224 aaKnown RBP28.13■■■□□ 2.09
CDKN2A-201ENST00000304494 LRRC63Q05C16 580 aa28.13■■■□□ 2.09
CDKN2A-201ENST00000304494 ZNF268Q14587 947 aaPredicted RBP28.13■■■□□ 2.09
CDKN2A-201ENST00000304494 UNC93AQ86WB7 457 aa28.13■■■□□ 2.09
CDKN2A-201ENST00000304494 C1orf210Q8IVY1 113 aa28.13■■■□□ 2.09
CDKN2A-201ENST00000304494 ADSSL1Q8N142 457 aa28.13■■■□□ 2.09
CDKN2A-201ENST00000304494 CLDN23Q96B33 292 aa28.13■■■□□ 2.09
CDKN2A-201ENST00000304494 EEF2KMTQ96G04 330 aa28.13■■■□□ 2.09
CDKN2A-201ENST00000304494 ZNF518BQ9C0D4 1074 aa28.13■■■□□ 2.09
CDKN2A-201ENST00000304494 C8orf33Q9H7E9 229 aaPredicted RBP28.13■■■□□ 2.09
CDKN2A-201ENST00000304494 MMRN2Q9H8L6 949 aa28.13■■■□□ 2.09
CDKN2A-201ENST00000304494 TRPC7Q9HCX4 862 aa28.13■■■□□ 2.09
CDKN2A-201ENST00000304494 TICRRQ7Z2Z1 1910 aa28.12■■■□□ 2.09
CDKN2A-201ENST00000304494 TRAV19A0A0A6YYK7 116 aa28.12■■■□□ 2.09
CDKN2A-201ENST00000304494 SHISA7A6NL88 538 aa28.12■■■□□ 2.09
CDKN2A-201ENST00000304494 SLC16A3O15427 465 aaKnown RBP28.12■■■□□ 2.09
CDKN2A-201ENST00000304494 RPS9P46781 194 aaKnown RBP28.12■■■□□ 2.09
CDKN2A-201ENST00000304494 PPP3CCP48454 512 aa28.12■■■□□ 2.09
CDKN2A-201ENST00000304494 PDE6CP51160 858 aa28.12■■■□□ 2.09
CDKN2A-201ENST00000304494 KRT39Q6A163 491 aa28.12■■■□□ 2.09
CDKN2A-201ENST00000304494 SPOPLQ6IQ16 392 aa28.12■■■□□ 2.09
CDKN2A-201ENST00000304494 TAS1R2Q8TE23 839 aa28.12■■■□□ 2.09
CDKN2A-201ENST00000304494 USP13Q92995 863 aaPredicted RBP28.12■■■□□ 2.09
CDKN2A-201ENST00000304494 MED10Q9BTT4 135 aa28.12■■■□□ 2.09
CDKN2A-201ENST00000304494 TTLL2Q9BWV7 592 aa28.12■■■□□ 2.09
CDKN2A-201ENST00000304494 MIA3Q5JRA6 1907 aa28.12■■■□□ 2.09
CDKN2A-201ENST00000304494 OBSL1O75147 1896 aa28.11■■■□□ 2.09
CDKN2A-201ENST00000304494 CLDN5O00501 218 aa28.11■■■□□ 2.09
CDKN2A-201ENST00000304494 PSMA7O14818 248 aa28.11■■■□□ 2.09
CDKN2A-201ENST00000304494 USP17L7P0C7H9 530 aa28.11■■■□□ 2.09
CDKN2A-201ENST00000304494 NBL1P41271 181 aa28.11■■■□□ 2.09
CDKN2A-201ENST00000304494 ANKRD40Q6AI12 368 aa28.11■■■□□ 2.09
CDKN2A-201ENST00000304494 ZFYVE19Q96K21 471 aa28.11■■■□□ 2.09
CDKN2A-201ENST00000304494 CYP3A43Q9HB55 503 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms