RNA–Protein interactions for RNA: ENST00000304465.7

SRGAP2C-201, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5 BASIC

Gene SRGAP2C, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-201ENST00000304465 FAM84AQ96KN4 292 aa17.12■□□□□ 0.33
SRGAP2C-201ENST00000304465 GCNAQ96QF7 691 aa17.12■□□□□ 0.33
SRGAP2C-201ENST00000304465 ACBD6Q9BR61 282 aa17.12■□□□□ 0.33
SRGAP2C-201ENST00000304465 TBC1D17Q9HA65 648 aa17.12■□□□□ 0.33
SRGAP2C-201ENST00000304465 L1RE1Q9UN81 338 aa17.12■□□□□ 0.33
SRGAP2C-201ENST00000304465 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.12■□□□□ 0.33
SRGAP2C-201ENST00000304465 DOCK6Q96HP0 2047 aa17.12■□□□□ 0.33
SRGAP2C-201ENST00000304465 MUC6Q6W4X9 2439 aa17.12■□□□□ 0.33
SRGAP2C-201ENST00000304465 A0A1W2PRU2 124 aa17.12■□□□□ 0.33
SRGAP2C-201ENST00000304465 NOL4O94818 638 aa17.12■□□□□ 0.33
SRGAP2C-201ENST00000304465 FMO5P49326 533 aa17.12■□□□□ 0.33
SRGAP2C-201ENST00000304465 PPP3CAQ08209 521 aa17.12■□□□□ 0.33
SRGAP2C-201ENST00000304465 TEAD2Q15562 447 aa17.12■□□□□ 0.33
SRGAP2C-201ENST00000304465 CBWD6Q4V339 395 aa17.12■□□□□ 0.33
SRGAP2C-201ENST00000304465 ARHGAP15Q53QZ3 475 aa17.12■□□□□ 0.33
SRGAP2C-201ENST00000304465 FIGNQ5HY92 759 aa17.12■□□□□ 0.33
SRGAP2C-201ENST00000304465 CBWD3Q5JTY5 395 aa17.12■□□□□ 0.33
SRGAP2C-201ENST00000304465 FAM78AQ5JUQ0 283 aa17.12■□□□□ 0.33
SRGAP2C-201ENST00000304465 CBWD5Q5RIA9 395 aa17.12■□□□□ 0.33
SRGAP2C-201ENST00000304465 TANGO2Q6ICL3 276 aa17.12■□□□□ 0.33
SRGAP2C-201ENST00000304465 DPH6Q7L8W6 267 aa17.12■□□□□ 0.33
SRGAP2C-201ENST00000304465 TRAPPC11Q7Z392 1133 aa17.12■□□□□ 0.33
SRGAP2C-201ENST00000304465 TMC2Q8TDI7 906 aa17.12■□□□□ 0.33
SRGAP2C-201ENST00000304465 SMARCD2Q92925 531 aa17.12■□□□□ 0.33
SRGAP2C-201ENST00000304465 ASB16Q96NS5 453 aa17.12■□□□□ 0.33
SRGAP2C-201ENST00000304465 MMS19Q96T76 1030 aa17.12■□□□□ 0.33
SRGAP2C-201ENST00000304465 CGRRF1Q99675 332 aa17.12■□□□□ 0.33
SRGAP2C-201ENST00000304465 SCN1AP35498 2009 aa17.11■□□□□ 0.33
SRGAP2C-201ENST00000304465 PTPRJQ12913 1337 aa17.11■□□□□ 0.33
SRGAP2C-201ENST00000304465 GTPBP10A4D1E9 387 aaKnown RBP17.11■□□□□ 0.33
SRGAP2C-201ENST00000304465 PHACTR2O75167 634 aa17.11■□□□□ 0.33
SRGAP2C-201ENST00000304465 CLSTN1O94985 981 aa17.11■□□□□ 0.33
SRGAP2C-201ENST00000304465 CASP14P31944 242 aa17.11■□□□□ 0.33
SRGAP2C-201ENST00000304465 CLDN10P78369 228 aa17.11■□□□□ 0.33
SRGAP2C-201ENST00000304465 TCF15Q12870 199 aa17.11■□□□□ 0.33
SRGAP2C-201ENST00000304465 TRPC3Q13507 836 aa17.11■□□□□ 0.33
SRGAP2C-201ENST00000304465 TCERG1LQ5VWI1 586 aa17.11■□□□□ 0.33
SRGAP2C-201ENST00000304465 PHLDB3Q6NSJ2 640 aa17.11■□□□□ 0.33
SRGAP2C-201ENST00000304465 LRRTM3Q86VH5 581 aa17.11■□□□□ 0.33
SRGAP2C-201ENST00000304465 CXorf38Q8TB03 319 aa17.11■□□□□ 0.33
SRGAP2C-201ENST00000304465 SHKBP1Q8TBC3 707 aa17.11■□□□□ 0.33
SRGAP2C-201ENST00000304465 ZSCAN18Q8TBC5 510 aaPredicted RBP17.11■□□□□ 0.33
SRGAP2C-201ENST00000304465 CRACR2AQ9BSW2 395 aa17.11■□□□□ 0.33
SRGAP2C-201ENST00000304465 ATXN3LQ9H3M9 355 aa17.11■□□□□ 0.33
SRGAP2C-201ENST00000304465 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.11■□□□□ 0.33
SRGAP2C-201ENST00000304465 LRRIQ3A6PVS8 624 aaPredicted RBP17.1■□□□□ 0.33
SRGAP2C-201ENST00000304465 PMM2O15305 246 aa17.1■□□□□ 0.33
SRGAP2C-201ENST00000304465 PI15O43692 258 aa17.1■□□□□ 0.33
SRGAP2C-201ENST00000304465 MFAP3LO75121 409 aa17.1■□□□□ 0.33
SRGAP2C-201ENST00000304465 HAPLN1P10915 354 aaPredicted RBP17.1■□□□□ 0.33
SRGAP2C-201ENST00000304465 KRT13P13646 458 aa17.1■□□□□ 0.33
SRGAP2C-201ENST00000304465 ACAT1P24752 427 aaKnown RBP17.1■□□□□ 0.33
SRGAP2C-201ENST00000304465 GABRR2P28476 465 aa17.1■□□□□ 0.33
SRGAP2C-201ENST00000304465 ADKP55263 362 aaKnown RBP17.1■□□□□ 0.33
SRGAP2C-201ENST00000304465 CCZ1BP86790 482 aa17.1■□□□□ 0.33
SRGAP2C-201ENST00000304465 CCZ1P86791 482 aaPredicted RBP17.1■□□□□ 0.33
SRGAP2C-201ENST00000304465 APBA1Q02410 837 aa17.1■□□□□ 0.33
SRGAP2C-201ENST00000304465 SLC44A4Q53GD3 710 aa17.1■□□□□ 0.33
SRGAP2C-201ENST00000304465 INTS6LQ5JSJ4 861 aaKnown RBP17.1■□□□□ 0.33
SRGAP2C-201ENST00000304465 TMC8Q8IU68 726 aa17.1■□□□□ 0.33
SRGAP2C-201ENST00000304465 TMEM139Q8IV31 216 aa17.1■□□□□ 0.33
SRGAP2C-201ENST00000304465 CCDC150Q8NCX0 1101 aa17.1■□□□□ 0.33
SRGAP2C-201ENST00000304465 LMO3Q8TAP4 145 aa17.1■□□□□ 0.33
SRGAP2C-201ENST00000304465 GIPC2Q8TF65 315 aa17.1■□□□□ 0.33
SRGAP2C-201ENST00000304465 ATOH1Q92858 354 aaPredicted RBP17.1■□□□□ 0.33
SRGAP2C-201ENST00000304465 E2F7Q96AV8 911 aa17.1■□□□□ 0.33
SRGAP2C-201ENST00000304465 LPIN3Q9BQK8 851 aa17.1■□□□□ 0.33
SRGAP2C-201ENST00000304465 PI4K2AQ9BTU6 479 aa17.1■□□□□ 0.33
SRGAP2C-201ENST00000304465 TRMT61BQ9BVS5 477 aaKnown RBP17.1■□□□□ 0.33
SRGAP2C-201ENST00000304465 BRD9Q9H8M2 597 aa17.1■□□□□ 0.33
SRGAP2C-201ENST00000304465 SIX2Q9NPC8 291 aa17.1■□□□□ 0.33
SRGAP2C-201ENST00000304465 CAPN11Q9UMQ6 739 aa17.1■□□□□ 0.33
SRGAP2C-201ENST00000304465 SIT1Q9Y3P8 196 aa17.1■□□□□ 0.33
SRGAP2C-201ENST00000304465 H0Y858 1186 aa17.09■□□□□ 0.33
SRGAP2C-201ENST00000304465 DPYSL4O14531 572 aa17.09■□□□□ 0.33
SRGAP2C-201ENST00000304465 MOSPD3O75425 235 aa17.09■□□□□ 0.33
SRGAP2C-201ENST00000304465 SLC9A1P19634 815 aa17.09■□□□□ 0.33
SRGAP2C-201ENST00000304465 FECHP22830 423 aa17.09■□□□□ 0.33
SRGAP2C-201ENST00000304465 PON1P27169 355 aa17.09■□□□□ 0.33
SRGAP2C-201ENST00000304465 CDC25CP30307 473 aa17.09■□□□□ 0.33
SRGAP2C-201ENST00000304465 RPL10AP62906 217 aaKnown RBP17.09■□□□□ 0.33
SRGAP2C-201ENST00000304465 TNNC1P63316 161 aa17.09■□□□□ 0.33
SRGAP2C-201ENST00000304465 PRKCQQ04759 706 aa17.09■□□□□ 0.33
SRGAP2C-201ENST00000304465 TRIM14Q14142 442 aa17.09■□□□□ 0.33
SRGAP2C-201ENST00000304465 GRM2Q14416 872 aa17.09■□□□□ 0.33
SRGAP2C-201ENST00000304465 MLF2Q15773 248 aaPredicted RBP17.09■□□□□ 0.33
SRGAP2C-201ENST00000304465 SOWAHAQ2M3V2 549 aa17.09■□□□□ 0.33
SRGAP2C-201ENST00000304465 SPATA2LQ8IUW3 424 aaPredicted RBP17.09■□□□□ 0.33
SRGAP2C-201ENST00000304465 YAF2Q8IY57 180 aa17.09■□□□□ 0.33
SRGAP2C-201ENST00000304465 CPLX3Q8WVH0 158 aa17.09■□□□□ 0.33
SRGAP2C-201ENST00000304465 ZNF516Q92618 1163 aa17.09■□□□□ 0.33
SRGAP2C-201ENST00000304465 TRIM44Q96DX7 344 aaPredicted RBP17.09■□□□□ 0.33
SRGAP2C-201ENST00000304465 ZSWIM3Q96MP5 696 aa17.09■□□□□ 0.33
SRGAP2C-201ENST00000304465 LRRC3Q9BY71 257 aa17.09■□□□□ 0.33
SRGAP2C-201ENST00000304465 PLA2G2FQ9BZM2 168 aa17.09■□□□□ 0.33
SRGAP2C-201ENST00000304465 GANQ9H2C0 597 aa17.09■□□□□ 0.33
SRGAP2C-201ENST00000304465 GTF3C4Q9UKN8 822 aa17.09■□□□□ 0.33
SRGAP2C-201ENST00000304465 NOTCH4Q99466 2003 aa17.08■□□□□ 0.33
SRGAP2C-201ENST00000304465 KMT2EQ8IZD2 1858 aa17.08■□□□□ 0.33
SRGAP2C-201ENST00000304465 A0A1W2PQJ5 194 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms