RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 SPATA18Q8TC71 538 aa14.28□□□□□ -0.12
CDH8-201ENST00000299345 MAGEB18Q96M61 343 aa14.28□□□□□ -0.12
CDH8-201ENST00000299345 VDRP11473 427 aa14.28□□□□□ -0.12
CDH8-201ENST00000299345 MIPP30301 263 aa14.28□□□□□ -0.12
CDH8-201ENST00000299345 CDH5P33151 784 aaPredicted RBP14.28□□□□□ -0.12
CDH8-201ENST00000299345 TFDP2Q14188 446 aa14.28□□□□□ -0.12
CDH8-201ENST00000299345 PARP9Q8IXQ6 854 aa14.28□□□□□ -0.12
CDH8-201ENST00000299345 OPTNQ96CV9 577 aa14.28□□□□□ -0.12
CDH8-201ENST00000299345 KIF12Q96FN5 646 aa14.28□□□□□ -0.12
CDH8-201ENST00000299345 THOC1Q96FV9 657 aaKnown RBP14.28□□□□□ -0.12
CDH8-201ENST00000299345 ASB7Q9H672 318 aa14.28□□□□□ -0.12
CDH8-201ENST00000299345 CYP3A43Q9HB55 503 aa14.28□□□□□ -0.12
CDH8-201ENST00000299345 USP18Q9UMW8 372 aa14.28□□□□□ -0.12
CDH8-201ENST00000299345 ACTL7BQ9Y614 415 aa14.28□□□□□ -0.12
CDH8-201ENST00000299345 GRAP2O75791 330 aa14.27□□□□□ -0.12
CDH8-201ENST00000299345 CETPP11597 493 aa14.27□□□□□ -0.12
CDH8-201ENST00000299345 MSH2P43246 934 aa14.27□□□□□ -0.12
CDH8-201ENST00000299345 BBS12Q6ZW61 710 aa14.27□□□□□ -0.12
CDH8-201ENST00000299345 FRMD8P1Q9BZ68 369 aaPredicted RBP14.27□□□□□ -0.12
CDH8-201ENST00000299345 RSAD1Q9HA92 442 aa14.27□□□□□ -0.12
CDH8-201ENST00000299345 ABCF3Q9NUQ8 709 aa14.27□□□□□ -0.12
CDH8-201ENST00000299345 HESX1Q9UBX0 185 aa14.27□□□□□ -0.12
CDH8-201ENST00000299345 ALDH3A1P30838 453 aa14.27□□□□□ -0.13
CDH8-201ENST00000299345 ATICP31939 592 aa14.27□□□□□ -0.13
CDH8-201ENST00000299345 ATP11AP98196 1134 aa14.27□□□□□ -0.13
CDH8-201ENST00000299345 OASLQ15646 514 aaKnown RBP14.27□□□□□ -0.13
CDH8-201ENST00000299345 SPRED3Q2MJR0 410 aa14.27□□□□□ -0.13
CDH8-201ENST00000299345 C3orf62Q6ZUJ4 267 aa14.27□□□□□ -0.13
CDH8-201ENST00000299345 VSIG1Q86XK7 387 aa14.27□□□□□ -0.13
CDH8-201ENST00000299345 FUKQ8N0W3 1084 aa14.27□□□□□ -0.13
CDH8-201ENST00000299345 KLHL29Q96CT2 875 aa14.27□□□□□ -0.13
CDH8-201ENST00000299345 PSMC3IPQ9P2W1 217 aaPredicted RBP14.27□□□□□ -0.13
CDH8-201ENST00000299345 COL11A1P12107 1806 aaPredicted RBP14.27□□□□□ -0.13
CDH8-201ENST00000299345 SPDYE5A6NIY4 337 aa14.27□□□□□ -0.13
CDH8-201ENST00000299345 ZBTB42B2RXF5 422 aa14.27□□□□□ -0.13
CDH8-201ENST00000299345 CHUKO15111 745 aa14.27□□□□□ -0.13
CDH8-201ENST00000299345 ALOX15BO15296 676 aa14.27□□□□□ -0.13
CDH8-201ENST00000299345 ERBB2P04626 1255 aa14.27□□□□□ -0.13
CDH8-201ENST00000299345 RGS7P49802 495 aa14.27□□□□□ -0.13
CDH8-201ENST00000299345 PKN2Q16513 984 aaKnown RBP14.27□□□□□ -0.13
CDH8-201ENST00000299345 RNASEH2BQ5TBB1 312 aaKnown RBP14.27□□□□□ -0.13
CDH8-201ENST00000299345 ARMCX2Q7L311 632 aa14.27□□□□□ -0.13
CDH8-201ENST00000299345 RELL1Q8IUW5 271 aa14.27□□□□□ -0.13
CDH8-201ENST00000299345 SUGP1Q8IWZ8 645 aaKnown RBP14.27□□□□□ -0.13
CDH8-201ENST00000299345 SLC4A11Q8NBS3 891 aa14.27□□□□□ -0.13
CDH8-201ENST00000299345 FBF1Q8TES7 1133 aa14.27□□□□□ -0.13
CDH8-201ENST00000299345 FNIP1Q8TF40 1166 aa14.27□□□□□ -0.13
CDH8-201ENST00000299345 ELOVL4Q9GZR5 314 aa14.27□□□□□ -0.13
CDH8-201ENST00000299345 ZNF408Q9H9D4 720 aa14.27□□□□□ -0.13
CDH8-201ENST00000299345 PTPRHQ9HD43 1115 aa14.27□□□□□ -0.13
CDH8-201ENST00000299345 UBN1Q9NPG3 1134 aa14.27□□□□□ -0.13
CDH8-201ENST00000299345 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.27□□□□□ -0.13
CDH8-201ENST00000299345 SIX4Q9UIU6 781 aa14.27□□□□□ -0.13
CDH8-201ENST00000299345 SMG5Q9UPR3 1016 aaKnown RBP14.27□□□□□ -0.13
CDH8-201ENST00000299345 UBOX5O94941 541 aa14.26□□□□□ -0.13
CDH8-201ENST00000299345 LGALS2P05162 132 aa14.26□□□□□ -0.13
CDH8-201ENST00000299345 GSTA1P08263 222 aa14.26□□□□□ -0.13
CDH8-201ENST00000299345 GPD1P21695 349 aa14.26□□□□□ -0.13
CDH8-201ENST00000299345 IL1R2P27930 398 aa14.26□□□□□ -0.13
CDH8-201ENST00000299345 ROR1Q01973 937 aa14.26□□□□□ -0.13
CDH8-201ENST00000299345 MPP2Q14168 576 aa14.26□□□□□ -0.13
CDH8-201ENST00000299345 KYAT1Q16773 422 aa14.26□□□□□ -0.13
CDH8-201ENST00000299345 PPP1R15BQ5SWA1 713 aa14.26□□□□□ -0.13
CDH8-201ENST00000299345 TMEM63BQ5T3F8 832 aa14.26□□□□□ -0.13
CDH8-201ENST00000299345 XYLT1Q86Y38 959 aa14.26□□□□□ -0.13
CDH8-201ENST00000299345 AFG1LQ8WV93 481 aa14.26□□□□□ -0.13
CDH8-201ENST00000299345 GRAMD1AQ96CP6 724 aa14.26□□□□□ -0.13
CDH8-201ENST00000299345 NT5C1AQ9BXI3 368 aa14.26□□□□□ -0.13
CDH8-201ENST00000299345 XPO7Q9UIA9 1087 aaKnown RBP14.26□□□□□ -0.13
CDH8-201ENST00000299345 PNMA3Q9UL41 463 aa14.26□□□□□ -0.13
CDH8-201ENST00000299345 EFR3BQ9Y2G0 817 aa14.26□□□□□ -0.13
CDH8-201ENST00000299345 ABLIM1O14639 778 aa14.26□□□□□ -0.13
CDH8-201ENST00000299345 PROZP22891 400 aa14.26□□□□□ -0.13
CDH8-201ENST00000299345 NDST1P52848 882 aa14.26□□□□□ -0.13
CDH8-201ENST00000299345 YWHAGP61981 247 aaKnown RBP eCLIP14.26□□□□□ -0.13
CDH8-201ENST00000299345 APBB1IPQ7Z5R6 666 aaPredicted RBP14.26□□□□□ -0.13
CDH8-201ENST00000299345 SLC35B2Q8TB61 432 aa14.26□□□□□ -0.13
CDH8-201ENST00000299345 TWNKQ96RR1 684 aa14.26□□□□□ -0.13
CDH8-201ENST00000299345 PPCSQ9HAB8 311 aa14.26□□□□□ -0.13
CDH8-201ENST00000299345 DPP3Q9NY33 737 aa14.26□□□□□ -0.13
CDH8-201ENST00000299345 BANF1O75531 89 aa14.26□□□□□ -0.13
CDH8-201ENST00000299345 HMGCRP04035 888 aa14.26□□□□□ -0.13
CDH8-201ENST00000299345 CD48P09326 243 aa14.26□□□□□ -0.13
CDH8-201ENST00000299345 SSTR1P30872 391 aa14.26□□□□□ -0.13
CDH8-201ENST00000299345 DNAJC3Q13217 504 aa14.26□□□□□ -0.13
CDH8-201ENST00000299345 KLHL38Q2WGJ6 581 aa14.26□□□□□ -0.13
CDH8-201ENST00000299345 C1orf228Q6PIY5 440 aa14.26□□□□□ -0.13
CDH8-201ENST00000299345 TRABD2AQ86V40 505 aa14.26□□□□□ -0.13
CDH8-201ENST00000299345 TTC39CQ8N584 583 aa14.26□□□□□ -0.13
CDH8-201ENST00000299345 RXFP2Q8WXD0 754 aa14.26□□□□□ -0.13
CDH8-201ENST00000299345 SLC10A4Q96EP9 437 aa14.26□□□□□ -0.13
CDH8-201ENST00000299345 CDCA5Q96FF9 252 aa14.26□□□□□ -0.13
CDH8-201ENST00000299345 CNPY3Q9BT09 278 aa14.26□□□□□ -0.13
CDH8-201ENST00000299345 TRIM6Q9C030 488 aaPredicted RBP14.26□□□□□ -0.13
CDH8-201ENST00000299345 HMGXB4Q9UGU5 601 aa14.26□□□□□ -0.13
CDH8-201ENST00000299345 HEY1Q9Y5J3 304 aa14.26□□□□□ -0.13
CDH8-201ENST00000299345 SSC5DA1L4H1 1573 aa14.25□□□□□ -0.13
CDH8-201ENST00000299345 SOCS7O14512 581 aa14.25□□□□□ -0.13
CDH8-201ENST00000299345 CILPO75339 1184 aa14.25□□□□□ -0.13
CDH8-201ENST00000299345 ECM2O94769 699 aaPredicted RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms