RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 JOSD2Q8TAC2 188 aa16.38■□□□□ 0.21
LSM6-201ENST00000296581 PLVAPQ9BX97 442 aa16.38■□□□□ 0.21
LSM6-201ENST00000296581 STIM2Q9P246 746 aa16.38■□□□□ 0.21
LSM6-201ENST00000296581 E5RJQ4 531 aa16.38■□□□□ 0.21
LSM6-201ENST00000296581 CCDC130P13994 396 aa16.38■□□□□ 0.21
LSM6-201ENST00000296581 RPL34P49207 117 aaKnown RBP16.38■□□□□ 0.21
LSM6-201ENST00000296581 BCAT1P54687 386 aa16.38■□□□□ 0.21
LSM6-201ENST00000296581 BST2Q10589 180 aaKnown RBP16.38■□□□□ 0.21
LSM6-201ENST00000296581 LRRC38Q5VT99 294 aa16.38■□□□□ 0.21
LSM6-201ENST00000296581 DAB2IPQ5VWQ8 1189 aa16.38■□□□□ 0.21
LSM6-201ENST00000296581 CD300LGQ6UXG3 332 aa16.38■□□□□ 0.21
LSM6-201ENST00000296581 SLC13A5Q86YT5 568 aaPredicted RBP16.38■□□□□ 0.21
LSM6-201ENST00000296581 KLHL7Q8IXQ5 586 aa16.38■□□□□ 0.21
LSM6-201ENST00000296581 KATNAL2Q8IYT4 538 aa16.38■□□□□ 0.21
LSM6-201ENST00000296581 CRISPLD2Q9H0B8 497 aa16.38■□□□□ 0.21
LSM6-201ENST00000296581 SLITRK6Q9H5Y7 841 aa16.38■□□□□ 0.21
LSM6-201ENST00000296581 METTL5Q9NRN9 209 aaKnown RBP16.38■□□□□ 0.21
LSM6-201ENST00000296581 DONSONQ9NYP3 566 aa16.38■□□□□ 0.21
LSM6-201ENST00000296581 INPP5FQ9Y2H2 1132 aa16.38■□□□□ 0.21
LSM6-201ENST00000296581 NR2E1Q9Y466 385 aa16.38■□□□□ 0.21
LSM6-201ENST00000296581 TANC1Q9C0D5 1861 aa16.37■□□□□ 0.21
LSM6-201ENST00000296581 ERLIN1O75477 346 aa16.37■□□□□ 0.21
LSM6-201ENST00000296581 ZRANB2O95218 330 aaKnown RBP eCLIP16.37■□□□□ 0.21
LSM6-201ENST00000296581 COL6A1P12109 1028 aa16.37■□□□□ 0.21
LSM6-201ENST00000296581 IBSPP21815 317 aaPredicted RBP16.37■□□□□ 0.21
LSM6-201ENST00000296581 LHX1P48742 406 aa16.37■□□□□ 0.21
LSM6-201ENST00000296581 PPP2R5EQ16537 467 aa16.37■□□□□ 0.21
LSM6-201ENST00000296581 PLEKHG4Q58EX7 1191 aa16.37■□□□□ 0.21
LSM6-201ENST00000296581 DSTYKQ6XUX3 929 aa16.37■□□□□ 0.21
LSM6-201ENST00000296581 SPATA18Q8TC71 538 aa16.37■□□□□ 0.21
LSM6-201ENST00000296581 HNRNPABQ99729 332 aaKnown RBP16.37■□□□□ 0.21
LSM6-201ENST00000296581 CYLDQ9NQC7 956 aa16.37■□□□□ 0.21
LSM6-201ENST00000296581 USTQ9Y2C2 406 aa16.37■□□□□ 0.21
LSM6-201ENST00000296581 F8VP50 259 aa16.36■□□□□ 0.21
LSM6-201ENST00000296581 SART1O43290 800 aaKnown RBP16.36■□□□□ 0.21
LSM6-201ENST00000296581 PTPN1P18031 435 aaKnown RBP16.36■□□□□ 0.21
LSM6-201ENST00000296581 MNX1P50219 401 aaPredicted RBP16.36■□□□□ 0.21
LSM6-201ENST00000296581 SNX16P57768 344 aa16.36■□□□□ 0.21
LSM6-201ENST00000296581 TIGD5Q53EQ6 642 aa16.36■□□□□ 0.21
LSM6-201ENST00000296581 CLLU1OSQ5K130 101 aa16.36■□□□□ 0.21
LSM6-201ENST00000296581 GLB1LQ6UWU2 654 aa16.36■□□□□ 0.21
LSM6-201ENST00000296581 FAM183BPQ6ZVS7 135 aa16.36■□□□□ 0.21
LSM6-201ENST00000296581 SLC2A14Q8TDB8 520 aa16.36■□□□□ 0.21
LSM6-201ENST00000296581 DDX47Q9H0S4 455 aaKnown RBP16.36■□□□□ 0.21
LSM6-201ENST00000296581 ARFGAP3Q9NP61 516 aa16.36■□□□□ 0.21
LSM6-201ENST00000296581 GOLGA6L10A0A0M3HER8 536 aa16.36■□□□□ 0.21
LSM6-201ENST00000296581 FSCN2O14926 492 aa16.36■□□□□ 0.21
LSM6-201ENST00000296581 RAD51CO43502 376 aa16.36■□□□□ 0.21
LSM6-201ENST00000296581 GABBR2O75899 941 aa16.36■□□□□ 0.21
LSM6-201ENST00000296581 PSMA2P25787 234 aa16.36■□□□□ 0.21
LSM6-201ENST00000296581 ADORA2BP29275 332 aa16.36■□□□□ 0.21
LSM6-201ENST00000296581 TKTP29401 623 aaKnown RBP16.36■□□□□ 0.21
LSM6-201ENST00000296581 RGS7P49802 495 aa16.36■□□□□ 0.21
LSM6-201ENST00000296581 MRPS25P82663 173 aaKnown RBP16.36■□□□□ 0.21
LSM6-201ENST00000296581 SLC7A5Q01650 507 aa16.36■□□□□ 0.21
LSM6-201ENST00000296581 FAM102AQ5T9C2 384 aaPredicted RBP16.36■□□□□ 0.21
LSM6-201ENST00000296581 CCNI2Q6ZMN8 369 aaPredicted RBP16.36■□□□□ 0.21
LSM6-201ENST00000296581 ANKRD33Q7Z3H0 272 aa16.36■□□□□ 0.21
LSM6-201ENST00000296581 UBXN6Q9BZV1 441 aa16.36■□□□□ 0.21
LSM6-201ENST00000296581 ELAC1Q9H777 363 aaKnown RBP16.36■□□□□ 0.21
LSM6-201ENST00000296581 TMEM161AQ9NX61 479 aa16.36■□□□□ 0.21
LSM6-201ENST00000296581 DDX43Q9NXZ2 648 aaKnown RBP16.36■□□□□ 0.21
LSM6-201ENST00000296581 M0QZQ0 153 aa16.35■□□□□ 0.21
LSM6-201ENST00000296581 ATP2C2O75185 946 aa16.35■□□□□ 0.21
LSM6-201ENST00000296581 B3GAT3O94766 335 aa16.35■□□□□ 0.21
LSM6-201ENST00000296581 CYP11A1P05108 521 aa16.35■□□□□ 0.21
LSM6-201ENST00000296581 TNFRSF8P28908 595 aa16.35■□□□□ 0.21
LSM6-201ENST00000296581 BEND6Q5SZJ8 279 aaPredicted RBP16.35■□□□□ 0.21
LSM6-201ENST00000296581 KIAA0319Q5VV43 1072 aa16.35■□□□□ 0.21
LSM6-201ENST00000296581 OR6B2Q6IFH4 312 aa16.35■□□□□ 0.21
LSM6-201ENST00000296581 OLFML1Q6UWY5 402 aa16.35■□□□□ 0.21
LSM6-201ENST00000296581 ZDHHC17Q8IUH5 632 aa16.35■□□□□ 0.21
LSM6-201ENST00000296581 ZDHHC14Q8IZN3 488 aa16.35■□□□□ 0.21
LSM6-201ENST00000296581 FUKQ8N0W3 1084 aa16.35■□□□□ 0.21
LSM6-201ENST00000296581 DBF4BQ8NFT6 615 aa16.35■□□□□ 0.21
LSM6-201ENST00000296581 EXD1Q8NHP7 514 aa16.35■□□□□ 0.21
LSM6-201ENST00000296581 BRCA2P51587 3418 aa16.35■□□□□ 0.21
LSM6-201ENST00000296581 PQBP1O60828 265 aaKnown RBP16.35■□□□□ 0.21
LSM6-201ENST00000296581 ZMYND10O75800 440 aa16.35■□□□□ 0.21
LSM6-201ENST00000296581 GLI1P08151 1106 aa16.35■□□□□ 0.21
LSM6-201ENST00000296581 ODC1P11926 461 aa16.35■□□□□ 0.21
LSM6-201ENST00000296581 TCF4P15884 667 aa16.35■□□□□ 0.21
LSM6-201ENST00000296581 ACAT1P24752 427 aaKnown RBP16.35■□□□□ 0.21
LSM6-201ENST00000296581 SATB1Q01826 763 aa16.35■□□□□ 0.21
LSM6-201ENST00000296581 DSC1Q08554 894 aa16.35■□□□□ 0.21
LSM6-201ENST00000296581 ACAP1Q15027 740 aa16.35■□□□□ 0.21
LSM6-201ENST00000296581 SIX1Q15475 284 aaPredicted RBP16.35■□□□□ 0.21
LSM6-201ENST00000296581 NOMO2Q5JPE7 1267 aa16.35■□□□□ 0.21
LSM6-201ENST00000296581 DCLRE1AQ6PJP8 1040 aa16.35■□□□□ 0.21
LSM6-201ENST00000296581 SLC39A5Q6ZMH5 540 aa16.35■□□□□ 0.21
LSM6-201ENST00000296581 EMC1Q8N766 993 aa16.35■□□□□ 0.21
LSM6-201ENST00000296581 PRELID2Q8N945 189 aa16.35■□□□□ 0.21
LSM6-201ENST00000296581 HSFY1Q96LI6 401 aa16.35■□□□□ 0.21
LSM6-201ENST00000296581 CXorf56Q9H5V9 222 aa16.35■□□□□ 0.21
LSM6-201ENST00000296581 CRTAC1Q9NQ79 661 aa16.35■□□□□ 0.21
LSM6-201ENST00000296581 GDF3Q9NR23 364 aa16.35■□□□□ 0.21
LSM6-201ENST00000296581 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.35■□□□□ 0.21
LSM6-201ENST00000296581 BHMG1C9JSJ3 638 aaPredicted RBP16.34■□□□□ 0.21
LSM6-201ENST00000296581 ENPP3O14638 875 aa16.34■□□□□ 0.21
LSM6-201ENST00000296581 SEC31AO94979 1220 aaKnown RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms