RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 GIPC2Q8TF65 315 aa11.36□□□□□ -0.59
RFC4-201ENST00000296273 MRPS31Q92665 395 aaKnown RBP11.36□□□□□ -0.59
RFC4-201ENST00000296273 ACDQ96AP0 544 aa11.36□□□□□ -0.59
RFC4-201ENST00000296273 EBF3Q9H4W6 596 aa11.36□□□□□ -0.59
RFC4-201ENST00000296273 PARVGQ9HBI0 331 aa11.36□□□□□ -0.59
RFC4-201ENST00000296273 UXTQ9UBK9 157 aaPredicted RBP11.36□□□□□ -0.59
RFC4-201ENST00000296273 EBF1Q9UH73 591 aa11.36□□□□□ -0.59
RFC4-201ENST00000296273 PCDHA5Q9Y5H7 936 aa11.36□□□□□ -0.59
RFC4-201ENST00000296273 TPRP12270 2363 aaKnown RBP11.35□□□□□ -0.59
RFC4-201ENST00000296273 EGFP01133 1207 aa11.35□□□□□ -0.59
RFC4-201ENST00000296273 PROS1P07225 676 aa11.35□□□□□ -0.59
RFC4-201ENST00000296273 NFICP08651 508 aa11.35□□□□□ -0.59
RFC4-201ENST00000296273 HOXC13P31276 330 aa11.35□□□□□ -0.59
RFC4-201ENST00000296273 MYH11P35749 1972 aa11.35□□□□□ -0.59
RFC4-201ENST00000296273 TSC2P49815 1807 aa11.35□□□□□ -0.59
RFC4-201ENST00000296273 ZNF131P52739 623 aa11.35□□□□□ -0.59
RFC4-201ENST00000296273 NFE2Q16621 373 aaPredicted RBP11.35□□□□□ -0.59
RFC4-201ENST00000296273 DPCR1Q3MIW9 517 aa11.35□□□□□ -0.59
RFC4-201ENST00000296273 SV2CQ496J9 727 aa11.35□□□□□ -0.59
RFC4-201ENST00000296273 TMEM119Q4V9L6 283 aa11.35□□□□□ -0.59
RFC4-201ENST00000296273 ARSHQ5FYA8 562 aa11.35□□□□□ -0.59
RFC4-201ENST00000296273 TRIM68Q6AZZ1 485 aa11.35□□□□□ -0.59
RFC4-201ENST00000296273 SLFN12LQ6IEE8 588 aa11.35□□□□□ -0.59
RFC4-201ENST00000296273 NT5DC4Q86YG4 428 aa11.35□□□□□ -0.59
RFC4-201ENST00000296273 CPA6Q8N4T0 437 aa11.35□□□□□ -0.59
RFC4-201ENST00000296273 MYCT1Q8N699 235 aa11.35□□□□□ -0.59
RFC4-201ENST00000296273 USP13Q92995 863 aaPredicted RBP11.35□□□□□ -0.59
RFC4-201ENST00000296273 CHFRQ96EP1 664 aa11.35□□□□□ -0.59
RFC4-201ENST00000296273 PLIN2Q99541 437 aa11.35□□□□□ -0.59
RFC4-201ENST00000296273 P2RY13Q9BPV8 354 aa11.35□□□□□ -0.59
RFC4-201ENST00000296273 REEP2Q9BRK0 252 aa11.35□□□□□ -0.59
RFC4-201ENST00000296273 SMG9Q9H0W8 520 aaKnown RBP11.35□□□□□ -0.59
RFC4-201ENST00000296273 DUSP15Q9H1R2 295 aaPredicted RBP11.35□□□□□ -0.59
RFC4-201ENST00000296273 ABI2Q9NYB9 513 aaPredicted RBP11.35□□□□□ -0.59
RFC4-201ENST00000296273 SERTAD1Q9UHV2 236 aa11.35□□□□□ -0.59
RFC4-201ENST00000296273 PCDHB5Q9Y5E4 795 aa11.35□□□□□ -0.59
RFC4-201ENST00000296273 NPHP3-ACAD11A0A0J9YXS1 232 aa11.34□□□□□ -0.59
RFC4-201ENST00000296273 VWA3AA6NCI4 1184 aa11.34□□□□□ -0.59
RFC4-201ENST00000296273 OTOL1A6NHN0 477 aaPredicted RBP11.34□□□□□ -0.59
RFC4-201ENST00000296273 KPNA7A9QM74 516 aa11.34□□□□□ -0.59
RFC4-201ENST00000296273 APBB3O95704 486 aa11.34□□□□□ -0.59
RFC4-201ENST00000296273 HMGA1P17096 107 aaKnown RBP11.34□□□□□ -0.59
RFC4-201ENST00000296273 GJA4P35212 333 aa11.34□□□□□ -0.59
RFC4-201ENST00000296273 PPP1R2P41236 205 aa11.34□□□□□ -0.59
RFC4-201ENST00000296273 PNPLA4P41247 253 aa11.34□□□□□ -0.59
RFC4-201ENST00000296273 GALK1P51570 392 aa11.34□□□□□ -0.59
RFC4-201ENST00000296273 GTF2BQ00403 316 aa11.34□□□□□ -0.59
RFC4-201ENST00000296273 TSPY1Q01534 308 aa11.34□□□□□ -0.59
RFC4-201ENST00000296273 MORC3Q14149 939 aa11.34□□□□□ -0.59
RFC4-201ENST00000296273 DAB2IPQ5VWQ8 1189 aa11.34□□□□□ -0.59
RFC4-201ENST00000296273 TMEM150AQ86TG1 271 aa11.34□□□□□ -0.59
RFC4-201ENST00000296273 LRRTM3Q86VH5 581 aa11.34□□□□□ -0.59
RFC4-201ENST00000296273 MON1AQ86VX9 555 aa11.34□□□□□ -0.59
RFC4-201ENST00000296273 AOPEPQ8N6M6 819 aa11.34□□□□□ -0.59
RFC4-201ENST00000296273 ENOX1Q8TC92 643 aaKnown RBP11.34□□□□□ -0.59
RFC4-201ENST00000296273 CD101Q93033 1021 aa11.34□□□□□ -0.59
RFC4-201ENST00000296273 CALML4Q96GE6 196 aa11.34□□□□□ -0.59
RFC4-201ENST00000296273 ZNF560Q96MR9 790 aa11.34□□□□□ -0.59
RFC4-201ENST00000296273 HHIPQ96QV1 700 aa11.34□□□□□ -0.59
RFC4-201ENST00000296273 EDEM2Q9BV94 578 aa11.34□□□□□ -0.59
RFC4-201ENST00000296273 ECT2Q9H8V3 914 aa11.34□□□□□ -0.59
RFC4-201ENST00000296273 DPP3Q9NY33 737 aa11.34□□□□□ -0.59
RFC4-201ENST00000296273 CCL26Q9Y258 94 aa11.34□□□□□ -0.59
RFC4-201ENST00000296273 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.34□□□□□ -0.59
RFC4-201ENST00000296273 BCLAF3A2AJT9 711 aaKnown RBP11.33□□□□□ -0.6
RFC4-201ENST00000296273 AP5Z1O43299 807 aa11.33□□□□□ -0.6
RFC4-201ENST00000296273 KRT18P05783 430 aaKnown RBP11.33□□□□□ -0.6
RFC4-201ENST00000296273 NMT1P30419 496 aaKnown RBP11.33□□□□□ -0.6
RFC4-201ENST00000296273 UBA7P41226 1012 aa11.33□□□□□ -0.6
RFC4-201ENST00000296273 ACOT2P49753 483 aa11.33□□□□□ -0.6
RFC4-201ENST00000296273 RPL10AP62906 217 aaKnown RBP11.33□□□□□ -0.6
RFC4-201ENST00000296273 CREB5Q02930 508 aa11.33□□□□□ -0.6
RFC4-201ENST00000296273 NR1H3Q13133 447 aa11.33□□□□□ -0.6
RFC4-201ENST00000296273 PNOCQ13519 176 aa11.33□□□□□ -0.6
RFC4-201ENST00000296273 DMC1Q14565 340 aa11.33□□□□□ -0.6
RFC4-201ENST00000296273 MTF1Q14872 753 aa11.33□□□□□ -0.6
RFC4-201ENST00000296273 WSCD1Q658N2 575 aa11.33□□□□□ -0.6
RFC4-201ENST00000296273 TXNDC8Q6A555 127 aa11.33□□□□□ -0.6
RFC4-201ENST00000296273 PSAPL1Q6NUJ1 521 aa11.33□□□□□ -0.6
RFC4-201ENST00000296273 SLC39A4Q6P5W5 647 aa11.33□□□□□ -0.6
RFC4-201ENST00000296273 GPBP1Q86WP2 473 aa11.33□□□□□ -0.6
RFC4-201ENST00000296273 RPLP0P6Q8NHW5 317 aa11.33□□□□□ -0.6
RFC4-201ENST00000296273 OSCP1Q8WVF1 389 aa11.33□□□□□ -0.6
RFC4-201ENST00000296273 ATP2A3Q93084 1043 aa11.33□□□□□ -0.6
RFC4-201ENST00000296273 CCDC47Q96A33 483 aaKnown RBP11.33□□□□□ -0.6
RFC4-201ENST00000296273 TRMT2BQ96GJ1 504 aaKnown RBP11.33□□□□□ -0.6
RFC4-201ENST00000296273 PAGE5Q96GU1 130 aa11.33□□□□□ -0.6
RFC4-201ENST00000296273 LRRC27Q9C0I9 530 aa11.33□□□□□ -0.6
RFC4-201ENST00000296273 SMOC1Q9H4F8 434 aa11.33□□□□□ -0.6
RFC4-201ENST00000296273 TMEM206Q9H813 350 aa11.33□□□□□ -0.6
RFC4-201ENST00000296273 ABCB6Q9NP58 842 aa11.33□□□□□ -0.6
RFC4-201ENST00000296273 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.33□□□□□ -0.6
RFC4-201ENST00000296273 AGO2Q9UKV8 859 aaKnown RBP11.33□□□□□ -0.6
RFC4-201ENST00000296273 MAGED2Q9UNF1 606 aaPredicted RBP11.33□□□□□ -0.6
RFC4-201ENST00000296273 STYXL1Q9Y6J8 313 aa11.33□□□□□ -0.6
RFC4-201ENST00000296273 SPTBN2O15020 2390 aa11.33□□□□□ -0.6
RFC4-201ENST00000296273 TBCAO75347 108 aaKnown RBP11.32□□□□□ -0.6
RFC4-201ENST00000296273 IL18RAPO95256 599 aa11.32□□□□□ -0.6
RFC4-201ENST00000296273 USP17L7P0C7H9 530 aa11.32□□□□□ -0.6
RFC4-201ENST00000296273 ARSAP15289 507 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms