RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 ANGPT2O15123 496 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 GJB6O95452 261 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 HNF1BP35680 557 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 PRCPP42785 496 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 CDK9P50750 372 aaKnown RBP12.18□□□□□ -0.46
SNIP1-201ENST00000296215 NKX2-5P52952 324 aaPredicted RBP12.18□□□□□ -0.46
SNIP1-201ENST00000296215 MYBPC1Q00872 1141 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 TAGLNQ01995 201 aaKnown RBP12.18□□□□□ -0.46
SNIP1-201ENST00000296215 NFE2Q16621 373 aaPredicted RBP12.18□□□□□ -0.46
SNIP1-201ENST00000296215 CASC4Q6P4E1 433 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 ULK2Q8IYT8 1036 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 OXNAD1Q96HP4 312 aaPredicted RBP12.18□□□□□ -0.46
SNIP1-201ENST00000296215 FAM213AQ9BRX8 229 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 TINF2Q9BSI4 451 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 HERC2P3Q9BVR0 1158 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 BRIP1Q9BX63 1249 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 TDRD1Q9BXT4 1180 aaKnown RBP12.18□□□□□ -0.46
SNIP1-201ENST00000296215 GPAMQ9HCL2 828 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 SSU72P8A0A1W2PR75 194 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 E2F3O00716 465 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 HLA-DRAP01903 254 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 CCND2P30279 289 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 BNIP3Q12983 259 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 MOGQ16653 247 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 EXOC3L4Q17RC7 722 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 RABL6Q3YEC7 729 aaPredicted RBP12.18□□□□□ -0.46
SNIP1-201ENST00000296215 TNNI3KQ59H18 835 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 FAM47AQ5JRC9 791 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 SPANXN2Q5MJ10 180 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 SPDYCQ5MJ68 293 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 CYFIP1Q7L576 1253 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 CAMK1DQ8IU85 385 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 NATD1Q8N6N6 113 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 SSH3Q8TE77 659 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 TMA16Q96EY4 203 aaKnown RBP12.18□□□□□ -0.46
SNIP1-201ENST00000296215 NUDT12Q9BQG2 462 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 OR2B2Q9GZK3 357 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 DCDC2Q9UHG0 476 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 YEATS2Q9ULM3 1422 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 ATP6V1G2-DDX39BF2Z307 99 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 SRGNP10124 158 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 KLRC1P26715 233 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 NME3Q13232 169 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 NAB2Q15742 525 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 PAGE2BQ5JRK9 111 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 RASSF6Q6ZTQ3 369 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 OR7A2PQ8NGA2 310 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 PNPT1Q8TCS8 783 aaKnown RBP12.18□□□□□ -0.46
SNIP1-201ENST00000296215 DCUN1D1Q96GG9 259 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 TLR10Q9BXR5 811 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 DCLK3Q9C098 648 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 S100A14Q9HCY8 104 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 PLK2Q9NYY3 685 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 BAG5Q9UL15 447 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 EIF4G3O43432 1585 aaKnown RBP12.18□□□□□ -0.46
SNIP1-201ENST00000296215 BTBD19C9JJ37 291 aa12.17□□□□□ -0.46
SNIP1-201ENST00000296215 CLOCKO15516 846 aa12.17□□□□□ -0.46
SNIP1-201ENST00000296215 CDK16Q00536 496 aa12.17□□□□□ -0.46
SNIP1-201ENST00000296215 RUNX1T1Q06455 604 aa12.17□□□□□ -0.46
SNIP1-201ENST00000296215 DSC3Q14574 896 aa12.17□□□□□ -0.46
SNIP1-201ENST00000296215 INPP5AQ14642 412 aa12.17□□□□□ -0.46
SNIP1-201ENST00000296215 DCUN1D2Q6PH85 259 aa12.17□□□□□ -0.46
SNIP1-201ENST00000296215 KLHL17Q6TDP4 642 aa12.17□□□□□ -0.46
SNIP1-201ENST00000296215 TGFBRAP1Q8WUH2 860 aa12.17□□□□□ -0.46
SNIP1-201ENST00000296215 CIDECQ96AQ7 238 aaPredicted RBP12.17□□□□□ -0.46
SNIP1-201ENST00000296215 CADM1Q9BY67 442 aaKnown RBP12.17□□□□□ -0.46
SNIP1-201ENST00000296215 IGSF9Q9P2J2 1179 aa12.17□□□□□ -0.46
SNIP1-201ENST00000296215 ARHGEF35A5YM69 484 aa12.17□□□□□ -0.46
SNIP1-201ENST00000296215 MEI4A8MW99 385 aa12.17□□□□□ -0.46
SNIP1-201ENST00000296215 RBL1P28749 1068 aa12.17□□□□□ -0.46
SNIP1-201ENST00000296215 PHKA2P46019 1235 aa12.17□□□□□ -0.46
SNIP1-201ENST00000296215 TAF5Q15542 800 aa12.17□□□□□ -0.46
SNIP1-201ENST00000296215 C10orf62Q5T681 223 aaPredicted RBP12.17□□□□□ -0.46
SNIP1-201ENST00000296215 PYHIN1Q6K0P9 492 aa12.17□□□□□ -0.46
SNIP1-201ENST00000296215 BEST2Q8NFU1 509 aa12.17□□□□□ -0.46
SNIP1-201ENST00000296215 EPS8L2Q9H6S3 715 aa12.17□□□□□ -0.46
SNIP1-201ENST00000296215 SCPEP1Q9HB40 452 aa12.17□□□□□ -0.46
SNIP1-201ENST00000296215 RAB26Q9ULW5 256 aa12.17□□□□□ -0.46
SNIP1-201ENST00000296215 RNASEH2AO75792 299 aaKnown RBP12.17□□□□□ -0.46
SNIP1-201ENST00000296215 ATF7P17544 494 aaPredicted RBP12.17□□□□□ -0.46
SNIP1-201ENST00000296215 GAP43P17677 238 aa12.17□□□□□ -0.46
SNIP1-201ENST00000296215 ITIH2P19823 946 aa12.17□□□□□ -0.46
SNIP1-201ENST00000296215 CAPZA2P47755 286 aa12.17□□□□□ -0.46
SNIP1-201ENST00000296215 HNRNPFP52597 415 aaKnown RBP12.17□□□□□ -0.46
SNIP1-201ENST00000296215 PTGDRQ13258 359 aa12.17□□□□□ -0.46
SNIP1-201ENST00000296215 PRPSAP1Q14558 356 aa12.17□□□□□ -0.46
SNIP1-201ENST00000296215 MORF4L2Q15014 288 aa12.17□□□□□ -0.46
SNIP1-201ENST00000296215 TBC1D19Q8N5T2 526 aa12.17□□□□□ -0.46
SNIP1-201ENST00000296215 ANKRD53Q8N9V6 530 aa12.17□□□□□ -0.46
SNIP1-201ENST00000296215 PDPRQ8NCN5 879 aa12.17□□□□□ -0.46
SNIP1-201ENST00000296215 NCLNQ969V3 563 aa12.17□□□□□ -0.46
SNIP1-201ENST00000296215 MSANTD3Q96H12 275 aa12.17□□□□□ -0.46
SNIP1-201ENST00000296215 CNDP1Q96KN2 507 aa12.17□□□□□ -0.46
SNIP1-201ENST00000296215 MLPHQ9BV36 600 aaPredicted RBP12.17□□□□□ -0.46
SNIP1-201ENST00000296215 SLC6A15Q9H2J7 730 aa12.17□□□□□ -0.46
SNIP1-201ENST00000296215 ISPDA4D126 451 aa12.17□□□□□ -0.46
SNIP1-201ENST00000296215 ITM2AO43736 263 aa12.17□□□□□ -0.46
SNIP1-201ENST00000296215 SLC4A1P02730 911 aa12.17□□□□□ -0.46
SNIP1-201ENST00000296215 CCNB1P14635 433 aa12.17□□□□□ -0.46
SNIP1-201ENST00000296215 PON1P27169 355 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms