RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 ADCY1Q08828 1119 aa16.05■□□□□ 0.16
CCDC140-201ENST00000295226 DUSP4Q13115 394 aa16.05■□□□□ 0.16
CCDC140-201ENST00000295226 GPR17Q13304 367 aa16.05■□□□□ 0.16
CCDC140-201ENST00000295226 ASTE1Q2TB18 679 aaPredicted RBP16.05■□□□□ 0.16
CCDC140-201ENST00000295226 LCLAT1Q6UWP7 414 aa16.05■□□□□ 0.16
CCDC140-201ENST00000295226 ADGRD2Q7Z7M1 963 aa16.05■□□□□ 0.16
CCDC140-201ENST00000295226 FAM35AQ86V20 835 aa16.05■□□□□ 0.16
CCDC140-201ENST00000295226 FMNL3Q8IVF7 1028 aa16.05■□□□□ 0.16
CCDC140-201ENST00000295226 SLC30A5Q8TAD4 765 aa16.05■□□□□ 0.16
CCDC140-201ENST00000295226 CPA5Q8WXQ8 436 aa16.05■□□□□ 0.16
CCDC140-201ENST00000295226 CCDC42Q96M95 316 aa16.05■□□□□ 0.16
CCDC140-201ENST00000295226 FAM161BQ96MY7 647 aa16.05■□□□□ 0.16
CCDC140-201ENST00000295226 KCNK16Q96T55 309 aa16.05■□□□□ 0.16
CCDC140-201ENST00000295226 DEF6Q9H4E7 631 aa16.05■□□□□ 0.16
CCDC140-201ENST00000295226 KRT82Q9NSB4 513 aa16.05■□□□□ 0.16
CCDC140-201ENST00000295226 CYTH4Q9UIA0 394 aa16.05■□□□□ 0.16
CCDC140-201ENST00000295226 BZW2Q9Y6E2 419 aaKnown RBP16.05■□□□□ 0.16
CCDC140-201ENST00000295226 SZT2Q5T011 3432 aa16.04■□□□□ 0.16
CCDC140-201ENST00000295226 AP1G2O75843 785 aa16.04■□□□□ 0.16
CCDC140-201ENST00000295226 SEC24AO95486 1093 aa16.04■□□□□ 0.16
CCDC140-201ENST00000295226 KLRC2P26717 231 aa16.04■□□□□ 0.16
CCDC140-201ENST00000295226 GPR15P49685 360 aa16.04■□□□□ 0.16
CCDC140-201ENST00000295226 CDK17Q00537 523 aa16.04■□□□□ 0.16
CCDC140-201ENST00000295226 MAPK8IP2Q13387 824 aaPredicted RBP16.04■□□□□ 0.16
CCDC140-201ENST00000295226 RAB33AQ14088 237 aa16.04■□□□□ 0.16
CCDC140-201ENST00000295226 SDHAF4Q5VUM1 108 aa16.04■□□□□ 0.16
CCDC140-201ENST00000295226 NAA35Q5VZE5 725 aa16.04■□□□□ 0.16
CCDC140-201ENST00000295226 STKLD1Q8NE28 680 aa16.04■□□□□ 0.16
CCDC140-201ENST00000295226 SECISBP2LQ93073 1101 aaKnown RBP16.04■□□□□ 0.16
CCDC140-201ENST00000295226 SMOQ99835 787 aa16.04■□□□□ 0.16
CCDC140-201ENST00000295226 DNAI2Q9GZS0 605 aa16.04■□□□□ 0.16
CCDC140-201ENST00000295226 PRDM12Q9H4Q4 367 aa16.04■□□□□ 0.16
CCDC140-201ENST00000295226 NGRNQ9NPE2 291 aaKnown RBP16.04■□□□□ 0.16
CCDC140-201ENST00000295226 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.04■□□□□ 0.16
CCDC140-201ENST00000295226 FNIP2Q9P278 1114 aa16.04■□□□□ 0.16
CCDC140-201ENST00000295226 SSX2IPQ9Y2D8 614 aa16.04■□□□□ 0.16
CCDC140-201ENST00000295226 ATG2AQ2TAZ0 1938 aa16.04■□□□□ 0.16
CCDC140-201ENST00000295226 PIK3R2O00459 728 aa16.03■□□□□ 0.16
CCDC140-201ENST00000295226 AKR1B10O60218 316 aa16.03■□□□□ 0.16
CCDC140-201ENST00000295226 RGS7P49802 495 aa16.03■□□□□ 0.16
CCDC140-201ENST00000295226 NDUFV1P49821 464 aa16.03■□□□□ 0.16
CCDC140-201ENST00000295226 KIF11P52732 1056 aa16.03■□□□□ 0.16
CCDC140-201ENST00000295226 MAP3K7CLP57077 242 aa16.03■□□□□ 0.16
CCDC140-201ENST00000295226 PDE4CQ08493 712 aa16.03■□□□□ 0.16
CCDC140-201ENST00000295226 BMS1Q14692 1282 aaKnown RBP16.03■□□□□ 0.16
CCDC140-201ENST00000295226 GRIN2CQ14957 1233 aa16.03■□□□□ 0.16
CCDC140-201ENST00000295226 MAPRE1Q15691 268 aaKnown RBP16.03■□□□□ 0.16
CCDC140-201ENST00000295226 PKDCCQ504Y2 493 aa16.03■□□□□ 0.16
CCDC140-201ENST00000295226 C2CD6Q53TS8 623 aa16.03■□□□□ 0.16
CCDC140-201ENST00000295226 NYAP1Q6ZVC0 841 aa16.03■□□□□ 0.16
CCDC140-201ENST00000295226 ZNF677Q86XU0 584 aa16.03■□□□□ 0.16
CCDC140-201ENST00000295226 TMTC1Q8IUR5 882 aa16.03■□□□□ 0.16
CCDC140-201ENST00000295226 SCN4BQ8IWT1 228 aa16.03■□□□□ 0.16
CCDC140-201ENST00000295226 ANKRD52Q8NB46 1076 aa16.03■□□□□ 0.16
CCDC140-201ENST00000295226 C1orf131Q8NDD1 294 aaKnown RBP16.03■□□□□ 0.16
CCDC140-201ENST00000295226 ZNF461Q8TAF7 563 aa16.03■□□□□ 0.16
CCDC140-201ENST00000295226 C16orf45Q96MC5 204 aaPredicted RBP16.03■□□□□ 0.16
CCDC140-201ENST00000295226 OXCT2Q9BYC2 517 aaPredicted RBP16.03■□□□□ 0.16
CCDC140-201ENST00000295226 PCDHGC3Q9UN70 934 aa16.03■□□□□ 0.16
CCDC140-201ENST00000295226 PCDHB5Q9Y5E4 795 aa16.03■□□□□ 0.16
CCDC140-201ENST00000295226 IRAK3Q9Y616 596 aa16.03■□□□□ 0.16
CCDC140-201ENST00000295226 SSU72P8A0A1W2PR75 194 aa16.02■□□□□ 0.16
CCDC140-201ENST00000295226 GOLGA6L9A6NEM1 432 aa16.02■□□□□ 0.16
CCDC140-201ENST00000295226 ZNF263O14978 683 aa16.02■□□□□ 0.16
CCDC140-201ENST00000295226 ARHGAP6O43182 974 aa16.02■□□□□ 0.16
CCDC140-201ENST00000295226 TGM5O43548 720 aa16.02■□□□□ 0.16
CCDC140-201ENST00000295226 ABLIM3O94929 683 aa16.02■□□□□ 0.16
CCDC140-201ENST00000295226 GPD2P43304 727 aa16.02■□□□□ 0.16
CCDC140-201ENST00000295226 NFE2Q16621 373 aaPredicted RBP16.02■□□□□ 0.16
CCDC140-201ENST00000295226 DDR2Q16832 855 aa16.02■□□□□ 0.16
CCDC140-201ENST00000295226 C4orf50Q6ZRC1 276 aa16.02■□□□□ 0.16
CCDC140-201ENST00000295226 CLEC20AQ6ZU45 233 aa16.02■□□□□ 0.16
CCDC140-201ENST00000295226 MTERF4Q7Z6M4 381 aaKnown RBP16.02■□□□□ 0.16
CCDC140-201ENST00000295226 GPR65Q8IYL9 337 aa16.02■□□□□ 0.16
CCDC140-201ENST00000295226 ZMIZ2Q8NF64 920 aa16.02■□□□□ 0.16
CCDC140-201ENST00000295226 GPR152Q8TDT2 470 aa16.02■□□□□ 0.16
CCDC140-201ENST00000295226 EMILIN2Q9BXX0 1053 aa16.02■□□□□ 0.16
CCDC140-201ENST00000295226 DUSP16Q9BY84 665 aa16.02■□□□□ 0.16
CCDC140-201ENST00000295226 HESX1Q9UBX0 185 aa16.02■□□□□ 0.16
CCDC140-201ENST00000295226 TJP2Q9UDY2 1190 aa16.02■□□□□ 0.16
CCDC140-201ENST00000295226 PTPRDP23468 1912 aa16.02■□□□□ 0.16
CCDC140-201ENST00000295226 REV3LO60673 3130 aa16.02■□□□□ 0.16
CCDC140-201ENST00000295226 COL4A4P53420 1690 aaPredicted RBP16.02■□□□□ 0.16
CCDC140-201ENST00000295226 F8VP50 259 aa16.02■□□□□ 0.15
CCDC140-201ENST00000295226 CYP1A1P04798 512 aaPredicted RBP16.02■□□□□ 0.15
CCDC140-201ENST00000295226 FAM200BP0CF97 657 aa16.02■□□□□ 0.15
CCDC140-201ENST00000295226 GRIK1P39086 918 aa16.02■□□□□ 0.15
CCDC140-201ENST00000295226 RBM10P98175 930 aaKnown RBP16.02■□□□□ 0.15
CCDC140-201ENST00000295226 CLEC16AQ2KHT3 1053 aa16.02■□□□□ 0.15
CCDC140-201ENST00000295226 MGAT5BQ3V5L5 792 aa16.02■□□□□ 0.15
CCDC140-201ENST00000295226 PMF1Q6P1K2 205 aa16.02■□□□□ 0.15
CCDC140-201ENST00000295226 PHLDB2Q86SQ0 1253 aa16.02■□□□□ 0.15
CCDC140-201ENST00000295226 SMARCD1Q96GM5 515 aa16.02■□□□□ 0.15
CCDC140-201ENST00000295226 SEPT5Q99719 369 aaPredicted RBP16.02■□□□□ 0.15
CCDC140-201ENST00000295226 DESI2Q9BSY9 194 aa16.02■□□□□ 0.15
CCDC140-201ENST00000295226 CYP4F11Q9HBI6 524 aa16.02■□□□□ 0.15
CCDC140-201ENST00000295226 AFF4Q9UHB7 1163 aaKnown RBP16.02■□□□□ 0.15
CCDC140-201ENST00000295226 EPN1Q9Y6I3 576 aaPredicted RBP16.02■□□□□ 0.15
CCDC140-201ENST00000295226 PLXNA3P51805 1871 aa16.01■□□□□ 0.15
CCDC140-201ENST00000295226 ZSCAN12O43309 604 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms