RNA–Protein interactions for RNA: ENST00000294119.6

UBXN1-201, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene UBXN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-201ENST00000294119 YWHAHQ04917 246 aaPredicted RBP16.87■□□□□ 0.29
UBXN1-201ENST00000294119 GRIN1Q05586 938 aa16.87■□□□□ 0.29
UBXN1-201ENST00000294119 CYP4F3Q08477 520 aa16.87■□□□□ 0.29
UBXN1-201ENST00000294119 ZNF268Q14587 947 aaPredicted RBP16.87■□□□□ 0.29
UBXN1-201ENST00000294119 KLHL40Q2TBA0 621 aa16.87■□□□□ 0.29
UBXN1-201ENST00000294119 HYIQ5T013 277 aa16.87■□□□□ 0.29
UBXN1-201ENST00000294119 PCSK4Q6UW60 755 aa16.87■□□□□ 0.29
UBXN1-201ENST00000294119 NAXDQ8IW45 347 aa16.87■□□□□ 0.29
UBXN1-201ENST00000294119 ATAD1Q8NBU5 361 aa16.87■□□□□ 0.29
UBXN1-201ENST00000294119 MCPH1Q8NEM0 835 aa16.87■□□□□ 0.29
UBXN1-201ENST00000294119 SYAP1Q96A49 352 aaPredicted RBP16.87■□□□□ 0.29
UBXN1-201ENST00000294119 C18orf25Q96B23 403 aaPredicted RBP16.87■□□□□ 0.29
UBXN1-201ENST00000294119 CDK5RAP3Q96JB5 506 aa16.87■□□□□ 0.29
UBXN1-201ENST00000294119 SPACA7Q96KW9 195 aa16.87■□□□□ 0.29
UBXN1-201ENST00000294119 CCDC43Q96MW1 224 aaKnown RBP16.87■□□□□ 0.29
UBXN1-201ENST00000294119 HNRNPABQ99729 332 aaKnown RBP16.87■□□□□ 0.29
UBXN1-201ENST00000294119 CUEDC2Q9H467 287 aa16.87■□□□□ 0.29
UBXN1-201ENST00000294119 TOPORSQ9NS56 1045 aaPredicted RBP16.87■□□□□ 0.29
UBXN1-201ENST00000294119 TOR4AQ9NXH8 423 aa16.87■□□□□ 0.29
UBXN1-201ENST00000294119 CITO14578 2027 aa16.87■□□□□ 0.29
UBXN1-201ENST00000294119 GOLGA4Q13439 2230 aaKnown RBP16.86■□□□□ 0.29
UBXN1-201ENST00000294119 ZNF638Q14966 1978 aaKnown RBP16.86■□□□□ 0.29
UBXN1-201ENST00000294119 A0A1B0GVL5 298 aa16.86■□□□□ 0.29
UBXN1-201ENST00000294119 OR6C75A6NL08 312 aa16.86■□□□□ 0.29
UBXN1-201ENST00000294119 ARHGAP6O43182 974 aa16.86■□□□□ 0.29
UBXN1-201ENST00000294119 SOAT2O75908 522 aa16.86■□□□□ 0.29
UBXN1-201ENST00000294119 PFKFB1P16118 471 aa16.86■□□□□ 0.29
UBXN1-201ENST00000294119 ATF6P18850 670 aa16.86■□□□□ 0.29
UBXN1-201ENST00000294119 MYBPC2Q14324 1141 aa16.86■□□□□ 0.29
UBXN1-201ENST00000294119 ATF7IP2Q5U623 682 aa16.86■□□□□ 0.29
UBXN1-201ENST00000294119 LMBRD2Q68DH5 695 aaPredicted RBP16.86■□□□□ 0.29
UBXN1-201ENST00000294119 RABEPKQ7Z6M1 372 aa16.86■□□□□ 0.29
UBXN1-201ENST00000294119 CPA6Q8N4T0 437 aa16.86■□□□□ 0.29
UBXN1-201ENST00000294119 IQUBQ8NA54 791 aa16.86■□□□□ 0.29
UBXN1-201ENST00000294119 RASSF8Q8NHQ8 419 aa16.86■□□□□ 0.29
UBXN1-201ENST00000294119 SNX29Q8TEQ0 813 aa16.86■□□□□ 0.29
UBXN1-201ENST00000294119 EPSTI1Q96J88 318 aa16.86■□□□□ 0.29
UBXN1-201ENST00000294119 TIGD1Q96MW7 591 aa16.86■□□□□ 0.29
UBXN1-201ENST00000294119 NACC1Q96RE7 527 aa16.86■□□□□ 0.29
UBXN1-201ENST00000294119 LPIN3Q9BQK8 851 aa16.86■□□□□ 0.29
UBXN1-201ENST00000294119 PTPRHQ9HD43 1115 aa16.86■□□□□ 0.29
UBXN1-201ENST00000294119 DDX19AQ9NUU7 478 aaKnown RBP16.86■□□□□ 0.29
UBXN1-201ENST00000294119 TDP1Q9NUW8 608 aa16.86■□□□□ 0.29
UBXN1-201ENST00000294119 TNFSF13BQ9Y275 285 aa16.86■□□□□ 0.29
UBXN1-201ENST00000294119 MUC22E2RYF6 1773 aaPredicted RBP16.85■□□□□ 0.29
UBXN1-201ENST00000294119 TRABD2BA6NFA1 517 aa16.85■□□□□ 0.29
UBXN1-201ENST00000294119 SPATA31C1P0DKV0 1188 aa16.85■□□□□ 0.29
UBXN1-201ENST00000294119 CCT6AP40227 531 aaKnown RBP16.85■□□□□ 0.29
UBXN1-201ENST00000294119 NAMPTP43490 491 aa16.85■□□□□ 0.29
UBXN1-201ENST00000294119 NDUFA8P51970 172 aa16.85■□□□□ 0.29
UBXN1-201ENST00000294119 PSMD2Q13200 908 aa16.85■□□□□ 0.29
UBXN1-201ENST00000294119 TMEM132AQ24JP5 1023 aa16.85■□□□□ 0.29
UBXN1-201ENST00000294119 RRAGBQ5VZM2 374 aa16.85■□□□□ 0.29
UBXN1-201ENST00000294119 CATSPER3Q86XQ3 398 aa16.85■□□□□ 0.29
UBXN1-201ENST00000294119 ELOA2Q8IYF1 753 aaPredicted RBP16.85■□□□□ 0.29
UBXN1-201ENST00000294119 FMR1NBQ8N0W7 255 aaPredicted RBP16.85■□□□□ 0.29
UBXN1-201ENST00000294119 ENGASEQ8NFI3 743 aa16.85■□□□□ 0.29
UBXN1-201ENST00000294119 BAHD1Q8TBE0 780 aaPredicted RBP16.85■□□□□ 0.29
UBXN1-201ENST00000294119 PIGOQ8TEQ8 1089 aa16.85■□□□□ 0.29
UBXN1-201ENST00000294119 WHAMMQ8TF30 809 aa16.85■□□□□ 0.29
UBXN1-201ENST00000294119 MAGEF1Q9HAY2 307 aa16.85■□□□□ 0.29
UBXN1-201ENST00000294119 HOOK1Q9UJC3 728 aaKnown RBP16.85■□□□□ 0.29
UBXN1-201ENST00000294119 PCOLCE2Q9UKZ9 415 aa16.85■□□□□ 0.29
UBXN1-201ENST00000294119 PCDHB9Q9Y5E1 797 aa16.85■□□□□ 0.29
UBXN1-201ENST00000294119 USP9XQ93008 2570 aaPredicted RBP16.84■□□□□ 0.29
UBXN1-201ENST00000294119 TRAK2O60296 914 aa16.84■□□□□ 0.29
UBXN1-201ENST00000294119 ZNF202O95125 648 aa16.84■□□□□ 0.29
UBXN1-201ENST00000294119 F11P03951 625 aa16.84■□□□□ 0.29
UBXN1-201ENST00000294119 DDX6P26196 483 aaKnown RBP eCLIP16.84■□□□□ 0.295e-6■□□□□ 8.4
UBXN1-201ENST00000294119 AVPR1AP37288 418 aa16.84■□□□□ 0.29
UBXN1-201ENST00000294119 YARSP54577 528 aaKnown RBP16.84■□□□□ 0.29
UBXN1-201ENST00000294119 SRSF1Q07955 248 aaKnown RBP eCLIP16.84■□□□□ 0.29
UBXN1-201ENST00000294119 EML3Q32P44 896 aa16.84■□□□□ 0.29
UBXN1-201ENST00000294119 C2orf27AQ580R0 203 aa16.84■□□□□ 0.29
UBXN1-201ENST00000294119 MAEAQ7L5Y9 396 aa16.84■□□□□ 0.29
UBXN1-201ENST00000294119 PIP4K2CQ8TBX8 421 aa16.84■□□□□ 0.29
UBXN1-201ENST00000294119 OSCP1Q8WVF1 389 aa16.84■□□□□ 0.29
UBXN1-201ENST00000294119 ANP32EQ9BTT0 268 aa16.84■□□□□ 0.29
UBXN1-201ENST00000294119 MMTAG2Q9BU76 263 aaKnown RBP16.84■□□□□ 0.29
UBXN1-201ENST00000294119 CDT1Q9H211 546 aa16.84■□□□□ 0.29
UBXN1-201ENST00000294119 STK17AQ9UEE5 414 aa16.84■□□□□ 0.29
UBXN1-201ENST00000294119 TIMM13Q9Y5L4 95 aaPredicted RBP16.84■□□□□ 0.29
UBXN1-201ENST00000294119 POLR2DO15514 142 aaKnown RBP16.83■□□□□ 0.28
UBXN1-201ENST00000294119 MAP3K13O43283 966 aa16.83■□□□□ 0.28
UBXN1-201ENST00000294119 ALDH1A2O94788 518 aa16.83■□□□□ 0.28
UBXN1-201ENST00000294119 SYPP08247 313 aa16.83■□□□□ 0.28
UBXN1-201ENST00000294119 SLFN14P0C7P3 912 aa16.83■□□□□ 0.28
UBXN1-201ENST00000294119 LIG1P18858 919 aa16.83■□□□□ 0.28
UBXN1-201ENST00000294119 ITPKBP27987 946 aa16.83■□□□□ 0.28
UBXN1-201ENST00000294119 OPRD1P41143 372 aa16.83■□□□□ 0.28
UBXN1-201ENST00000294119 MRPS21P82921 87 aaKnown RBP16.83■□□□□ 0.28
UBXN1-201ENST00000294119 BFSP1Q12934 665 aa16.83■□□□□ 0.28
UBXN1-201ENST00000294119 MTF1Q14872 753 aa16.83■□□□□ 0.28
UBXN1-201ENST00000294119 ZNF77Q15935 545 aa16.83■□□□□ 0.28
UBXN1-201ENST00000294119 GAB4Q2WGN9 574 aa16.83■□□□□ 0.28
UBXN1-201ENST00000294119 USP49Q70CQ1 688 aa16.83■□□□□ 0.28
UBXN1-201ENST00000294119 CEP57L1Q8IYX8 460 aa16.83■□□□□ 0.28
UBXN1-201ENST00000294119 MAB21L3Q8N8X9 362 aa16.83■□□□□ 0.28
UBXN1-201ENST00000294119 GPT2Q8TD30 523 aa16.83■□□□□ 0.28
UBXN1-201ENST00000294119 CCDC94Q9BW85 323 aaPredicted RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms