RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 YAF2Q8IY57 180 aa10.45□□□□□ -0.74
CCDC58-201ENST00000291458 C2orf15Q8WU43 125 aaKnown RBP10.45□□□□□ -0.74
CCDC58-201ENST00000291458 ELSPBP1Q96BH3 223 aa10.45□□□□□ -0.74
CCDC58-201ENST00000291458 CCDC34Q96HJ3 373 aa10.45□□□□□ -0.74
CCDC58-201ENST00000291458 ACBD6Q9BR61 282 aa10.45□□□□□ -0.74
CCDC58-201ENST00000291458 TRMT61BQ9BVS5 477 aaKnown RBP10.45□□□□□ -0.74
CCDC58-201ENST00000291458 CGNQ9P2M7 1197 aaKnown RBP10.45□□□□□ -0.74
CCDC58-201ENST00000291458 NME7Q9Y5B8 376 aa10.45□□□□□ -0.74
CCDC58-201ENST00000291458 HELZP42694 1942 aaKnown RBP10.45□□□□□ -0.74
CCDC58-201ENST00000291458 PATJQ8NI35 1801 aa10.44□□□□□ -0.74
CCDC58-201ENST00000291458 SLC38A8A6NNN8 435 aa10.44□□□□□ -0.74
CCDC58-201ENST00000291458 A8MXQ7 604 aa10.44□□□□□ -0.74
CCDC58-201ENST00000291458 CLDN5O00501 218 aa10.44□□□□□ -0.74
CCDC58-201ENST00000291458 PDXKO00764 312 aa10.44□□□□□ -0.74
CCDC58-201ENST00000291458 AKAP3O75969 853 aa10.44□□□□□ -0.74
CCDC58-201ENST00000291458 KIF20AO95235 890 aa10.44□□□□□ -0.74
CCDC58-201ENST00000291458 VNN1O95497 513 aa10.44□□□□□ -0.74
CCDC58-201ENST00000291458 WARSP23381 471 aaKnown RBP10.44□□□□□ -0.74
CCDC58-201ENST00000291458 GRIK1P39086 918 aa10.44□□□□□ -0.74
CCDC58-201ENST00000291458 GCGRP47871 477 aa10.44□□□□□ -0.74
CCDC58-201ENST00000291458 SOX9P48436 509 aa10.44□□□□□ -0.74
CCDC58-201ENST00000291458 GCLMP48507 274 aa10.44□□□□□ -0.74
CCDC58-201ENST00000291458 CDH8P55286 799 aa10.44□□□□□ -0.74
CCDC58-201ENST00000291458 PFKPQ01813 784 aa10.44□□□□□ -0.74
CCDC58-201ENST00000291458 FAM160A1Q05DH4 1040 aa10.44□□□□□ -0.74
CCDC58-201ENST00000291458 SLC44A4Q53GD3 710 aa10.44□□□□□ -0.74
CCDC58-201ENST00000291458 ZNF667Q5HYK9 610 aa10.44□□□□□ -0.74
CCDC58-201ENST00000291458 TXNDC8Q6A555 127 aa10.44□□□□□ -0.74
CCDC58-201ENST00000291458 ARID3BQ8IVW6 561 aaPredicted RBP10.44□□□□□ -0.74
CCDC58-201ENST00000291458 FAM186BQ8IYM0 893 aa10.44□□□□□ -0.74
CCDC58-201ENST00000291458 FMR1NBQ8N0W7 255 aaPredicted RBP10.44□□□□□ -0.74
CCDC58-201ENST00000291458 MAB21L3Q8N8X9 362 aa10.44□□□□□ -0.74
CCDC58-201ENST00000291458 PJA1Q8NG27 643 aa10.44□□□□□ -0.74
CCDC58-201ENST00000291458 PARD3BQ8TEW8 1205 aa10.44□□□□□ -0.74
CCDC58-201ENST00000291458 SYAP1Q96A49 352 aaPredicted RBP10.44□□□□□ -0.74
CCDC58-201ENST00000291458 PKMYT1Q99640 499 aa10.44□□□□□ -0.74
CCDC58-201ENST00000291458 MED10Q9BTT4 135 aa10.44□□□□□ -0.74
CCDC58-201ENST00000291458 IL21Q9HBE4 155 aa10.44□□□□□ -0.74
CCDC58-201ENST00000291458 MAGEC2Q9UBF1 373 aaPredicted RBP10.44□□□□□ -0.74
CCDC58-201ENST00000291458 CDH9Q9ULB4 789 aa10.44□□□□□ -0.74
CCDC58-201ENST00000291458 MTF2Q9Y483 593 aaPredicted RBP10.44□□□□□ -0.74
CCDC58-201ENST00000291458 ASB3Q9Y575 518 aa10.44□□□□□ -0.74
CCDC58-201ENST00000291458 ANAPC1Q9H1A4 1944 aa10.44□□□□□ -0.74
CCDC58-201ENST00000291458 TRIM49BA6NDI0 452 aa10.43□□□□□ -0.74
CCDC58-201ENST00000291458 BIN1O00499 593 aa10.43□□□□□ -0.74
CCDC58-201ENST00000291458 GABRDO14764 452 aa10.43□□□□□ -0.74
CCDC58-201ENST00000291458 ZNF263O14978 683 aa10.43□□□□□ -0.74
CCDC58-201ENST00000291458 GADD45BO75293 160 aaPredicted RBP10.43□□□□□ -0.74
CCDC58-201ENST00000291458 TADA3O75528 432 aa10.43□□□□□ -0.74
CCDC58-201ENST00000291458 HLA-DRAP01903 254 aa10.43□□□□□ -0.74
CCDC58-201ENST00000291458 CSH1P0DML2 217 aa10.43□□□□□ -0.74
CCDC58-201ENST00000291458 CSH2P0DML3 217 aa10.43□□□□□ -0.74
CCDC58-201ENST00000291458 KRT13P13646 458 aa10.43□□□□□ -0.74
CCDC58-201ENST00000291458 PSMC3P17980 439 aa10.43□□□□□ -0.74
CCDC58-201ENST00000291458 ANXA13P27216 316 aa10.43□□□□□ -0.74
CCDC58-201ENST00000291458 GNL1P36915 607 aaPredicted RBP10.43□□□□□ -0.74
CCDC58-201ENST00000291458 MRE11P49959 708 aa10.43□□□□□ -0.74
CCDC58-201ENST00000291458 CLCN5P51795 746 aa10.43□□□□□ -0.74
CCDC58-201ENST00000291458 VAMP7P51809 220 aa10.43□□□□□ -0.74
CCDC58-201ENST00000291458 NLRP12P59046 1061 aa10.43□□□□□ -0.74
CCDC58-201ENST00000291458 RPL10AP62906 217 aaKnown RBP10.43□□□□□ -0.74
CCDC58-201ENST00000291458 SMARCB1Q12824 385 aa10.43□□□□□ -0.74
CCDC58-201ENST00000291458 KCNB1Q14721 858 aa10.43□□□□□ -0.74
CCDC58-201ENST00000291458 ANGPT1Q15389 498 aa10.43□□□□□ -0.74
CCDC58-201ENST00000291458 DCAF17Q5H9S7 520 aaPredicted RBP10.43□□□□□ -0.74
CCDC58-201ENST00000291458 KLHL10Q6JEL2 608 aa10.43□□□□□ -0.74
CCDC58-201ENST00000291458 C4orf50Q6ZRC1 276 aa10.43□□□□□ -0.74
CCDC58-201ENST00000291458 DPH6Q7L8W6 267 aa10.43□□□□□ -0.74
CCDC58-201ENST00000291458 CCDC105Q8IYK2 499 aa10.43□□□□□ -0.74
CCDC58-201ENST00000291458 DTWD2Q8NBA8 298 aa10.43□□□□□ -0.74
CCDC58-201ENST00000291458 CSGALNACT1Q8TDX6 532 aa10.43□□□□□ -0.74
CCDC58-201ENST00000291458 SMARCE1Q969G3 411 aa10.43□□□□□ -0.74
CCDC58-201ENST00000291458 JAKMIP2Q96AA8 810 aa10.43□□□□□ -0.74
CCDC58-201ENST00000291458 PCED1BQ96HM7 432 aa10.43□□□□□ -0.74
CCDC58-201ENST00000291458 PRRX2Q99811 253 aa10.43□□□□□ -0.74
CCDC58-201ENST00000291458 MKNK1Q9BUB5 465 aa10.43□□□□□ -0.74
CCDC58-201ENST00000291458 ZNF518BQ9C0D4 1074 aa10.43□□□□□ -0.74
CCDC58-201ENST00000291458 SDCBP2Q9H190 292 aa10.43□□□□□ -0.74
CCDC58-201ENST00000291458 XYLT2Q9H1B5 865 aa10.43□□□□□ -0.74
CCDC58-201ENST00000291458 KCNH6Q9H252 994 aa10.43□□□□□ -0.74
CCDC58-201ENST00000291458 LTB4R2Q9NPC1 389 aa10.43□□□□□ -0.74
CCDC58-201ENST00000291458 DMAC2Q9NW81 257 aa10.43□□□□□ -0.74
CCDC58-201ENST00000291458 HMGXB4Q9UGU5 601 aa10.43□□□□□ -0.74
CCDC58-201ENST00000291458 SIT1Q9Y3P8 196 aa10.43□□□□□ -0.74
CCDC58-201ENST00000291458 PIAS3Q9Y6X2 628 aa10.43□□□□□ -0.74
CCDC58-201ENST00000291458 TRIOO75962 3097 aa10.42□□□□□ -0.74
CCDC58-201ENST00000291458 KANSL1LA0AUZ9 987 aa10.42□□□□□ -0.74
CCDC58-201ENST00000291458 FAM170BA6NMN3 283 aa10.42□□□□□ -0.74
CCDC58-201ENST00000291458 F8VP50 259 aa10.42□□□□□ -0.74
CCDC58-201ENST00000291458 SCAMP3O14828 347 aaKnown RBP10.42□□□□□ -0.74
CCDC58-201ENST00000291458 KINO60870 393 aaKnown RBP10.42□□□□□ -0.74
CCDC58-201ENST00000291458 MICAL2O94851 1124 aa10.42□□□□□ -0.74
CCDC58-201ENST00000291458 SMC2O95347 1197 aa10.42□□□□□ -0.74
CCDC58-201ENST00000291458 FGF19O95750 216 aa10.42□□□□□ -0.74
CCDC58-201ENST00000291458 ABL1P00519 1130 aa10.42□□□□□ -0.74
CCDC58-201ENST00000291458 C4BPAP04003 597 aaKnown RBP10.42□□□□□ -0.74
CCDC58-201ENST00000291458 CCDC130P13994 396 aa10.42□□□□□ -0.74
CCDC58-201ENST00000291458 GLULP15104 373 aa10.42□□□□□ -0.74
CCDC58-201ENST00000291458 HMGA1P17096 107 aaKnown RBP10.42□□□□□ -0.74
CCDC58-201ENST00000291458 CD58P19256 250 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 193.9 ms